Salmo salar (Atlantic salmon): 106584549
Help
Entry
106584549 CDS
T04363
Name
(RefSeq) receptor-type tyrosine-protein phosphatase zeta-like
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106584549
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sasa01009
]
106584549
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sasa00535
]
106584549
Enzymes [BR:
sasa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
106584549
Protein phosphatases and associated proteins [BR:
sasa01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
106584549
Proteoglycans [BR:
sasa00535
]
Cell surface proteoglycans
Others
106584549
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
PTP-SAK
Tc-R-P
PTPlike_phytase
DSPc
PTP-NADK
GUN4_N
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
106584549
NCBI-ProteinID:
XP_014025443
LinkDB
All DBs
Position
ssa23:36892624..37005224
Genome browser
AA seq
1793 aa
AA seq
DB search
MDTAASRCFLLLTQLLRVCQLAEPVQGYGYRAQAAQRKFADDIDWSYAGTLNQNNWANKY
PSCSNARQSPINIEEELTQVKVQFQKLKFEGWEEAMSDRTTIKNDGKTVAVNPEGDFYVS
GGGLRGRFKVGRITFHWGRCNASSEGSEHSLSGVKYPLEMQIYCYEALHFESIDQAIKDG
GRITALSVLLETGIEDNDNYVAIIDGVNSVSRFGKSGMVGPFSLRGLLPNSTDKYFTYNG
SLTTPPCTDTVEWIVFKNTVAISDTQLEMFCEVMTMQQAGYVMLMDYLQNNFREQQQQFM
GQVFSSYTGTEEVLTPICSSEPENVQADPHNLTSLLVMWERPRAVYDAGIEKYSVTYRLA
QGEDSATFQYLTDGDQDVGAMLQDLIANTSYVVQVVAVCTNGLYGRVSEQMSVDMPFDDP
EATPYPDSTEFEGEEDYGPWAEPGVELDNDMDWTTQTTTRTRPTTTTGPPSLPLPAIRTT
TQRRTPTPGTPSRTTQPNRAQTSTEQSERYRSTTRAPAEGAVSAGSRGRGRTQKYTTTVT
TPQSRTDDITTSSTKTEKGRGVACPVTVPSGKGSGVSMATPLPESRTVATSASSLSQREP
PWPTSPSMPLFSSTASSFGGALLQPTQPVFNGELLPSTLPVCDTSTPGNPGSTLNNDPTA
CLHAPPSSRPLSSLTPPALDSLHAATALLPSGDSYLTTSPTLSLLPHPSHPLYGWETVVS
HGFGDDDSGDGDMLSGSSSVASGDPPMFSDTHPLQTLPDSPTELAFRPLPATSLSLQPSL
LLSSDFSLSGATPGLTGSVSGGLGDSSYASGREVESCLVGVVVGGGGDVGFTVASDGVES
LCTGSLVGFSSSWLPAYPHLPLPTSDWGAASLALYSSGSHLDHLLHSSLGGSSNPSGGQP
LFSSSSSPPVPPLSGSHSDLLISVTATPSGSKDHWVSAPSSSYSASPLTPTLPPELQTVD
SSASGLNLSGEAQEELDEEWDRVQSSASGEGALPYIPAFTPSLTSEAAATPNIDIEELSS
SFYFESKNGSAVTTDTAGSTATVSGVTAAVPWSLGGEVESGEWQGESLYDNETSSDFTIT
ERTERDSEEEPVAEASNSSHESRVGLAREREMRAMVPLAVVSTLTFLGLIVLVGILIYWR
KCFQIAHFYIEDNTSPRVISVSPTSMHTDTDKHEALTVKQFVKHVKELHHTNAFSREFEI
LKECYEEVQACTVDLGITADGSNHPDNKNKNRYINILAYDHSRVRLSTQADKDGKSGDYI
NANYVDGFNKSRAYIAAQGPLKSSTEDFWRMVWEQNVGVIIMITNLVEKGRRKCDQYWPL
ESQEEYGGFLVTVKSSKVLAHYTQRTFTLRNTKVKKVSLKGRINERTVTQYHYTQWPDMG
VPEYTLPVLTFVQKSSKARTDDMGPIVVHCSAGVGRTGTYIVLDSMLKQIKEEGTVNIMG
FLKHIRTQRNYLVQTEEQYVFIHDALVEAILGKETEVPSSRIHSYVNDLLTPGPSGSTQL
EKQFKLISSSNAIQCDYSAALKECNREKNRNSSLIPVERSRVCLSTVAGETTSDYINASY
LTGYRQSTEFIVTQNPLAGTVTDFWRMIWDHNAQVIVTLPGTPSLAEGEEPYVYWPRKEQ
PISCEAFTVTLRSENHMCLANEEMLVVQHYVLEATQDDYVLEVRHYRAPQWPNPDSPISS
TFELLSLVKEESSSKEGPTVVHDQVGGVTAGTFCALSTLVRQLEAESSVDVYQVAKMFNL
MRPRTFTDVEQYQFLYKAMLSLVGTQEDERMLQSSDNNGTVPGGTAESLESLV
NT seq
5382 nt
NT seq
+upstream
nt +downstream
nt
atggacacggctgcttcaagatgcttcctattgctcactcagctcttgcgcgtctgtcaa
ttagctgaacctgtgcaaggatacggataccgggcccaggccgcccagcgcaaattcgct
gatgacatcgactggtcctatgcggggactctaaaccaaaacaactgggccaacaagtac
ccatcatgcagcaatgctagacagtcgcccatcaacatcgaggaggagctgacacaggtc
aaagttcagttccaaaagctgaagtttgagggctgggaggaggcgatgtctgataggacc
accatcaagaatgacggcaagaccgtggcggtgaacccagagggggatttctatgtgagt
ggaggggggctgaggggcaggtttaaggtggggagaatcaccttccactggggccgctgt
aacgcttcctcagagggctccgagcacagtctcagtggggtcaagtaccccctggagatg
cagatctactgttatgaagcgcttcactttgagtccatagaccaggccatcaaggacggg
ggcaggatcacagctctctctgtgctgttagagacaggcatcgaagacaatgacaattac
gtggccattatcgacggagtcaacagtgtcagccgattcggtaagagtgggatggtgggt
cccttctctctccgtggcctcctgcccaactcaacagataagtacttcacctacaacggc
tccctcaccaccccaccctgcactgataccgtggagtggattgtcttcaagaacactgtg
gccatctccgacacgcagctggagatgttctgtgaggtgatgaccatgcagcaggcaggc
tatgtgatgttgatggactacctgcagaacaacttcagggagcagcagcagcagttcatg
ggacaggtcttctcctcctataccggcacagaggaggttctcactcccatctgtagttca
gagccggagaatgtgcaggcggacccccataacctgaccagcctgctggtgatgtgggag
cggccgagggcggtgtacgatgctgggatagagaagtactcagtcacttacaggctggcc
caaggagaggactctgcaaccttccagtacctgactgacggagaccaggatgtgggggcc
atgctgcaggacctgatagccaacactagctatgtggtgcaggtggtggccgtgtgcacc
aacggtctgtacggtcgcgtgagcgagcagatgtccgtcgacatgcccttcgacgaccct
gaggcaacaccttatccagattctactgaatttgaaggggaagaggactatggaccctgg
gctgaaccgggtgtagaactggacaatgacatggattggacaacccaaaccactacgaga
accaggcccacaacaaccactggcccacccagcctccccttgcctgctatcagaaccacc
acccagaggagaacccccacaccaggcactccatccaggaccactcaacccaaccgagca
cagacgtccacagagcagagtgagaggtaccgcagcacaaccagagccccagcagagggg
gccgtctcagcaggcagcagaggcagggggagaacccagaaatataccactacagtgacc
actccgcaatcacgcactgatgacatcaccacttcgtcaaccaagaccgagaagggcaga
ggggtggcgtgtcctgtgaccgtcccaagcggcaaaggcagcggtgtttccatggccacc
ccgctcccggaaagccggaccgtggccacttccgcctcctccctctctcagagagaacca
ccatggcctacaagtcccagcatgcccttgttttcatccactgcctcctctttcggcggg
gcactcttgcagcccacgcagccggtgttcaacggtgagctcctcccctccaccctccct
gtgtgtgacacgtcgacccctggcaatcccggctccacccttaacaacgaccccaccgcc
tgcctgcatgcccctccctcgtctaggcccctgtcgtctttgacccctcctgctctggac
tccctgcatgctgctacagcactgttgcctagtggtgactcgtacctcactacctccccc
accctgtctctcctccctcacccctcacaccccctgtatggttgggagacagtcgtctct
catggttttggtgatgatgatagtggtgatggtgatatgttgtctggttcttcgtccgtg
gcctcgggtgacccaccaatgtttagtgacactcacccccttcaaaccttacctgactcc
cccactgagctagccttcagacctctccctgcaacctctctctccctgcagccttctctt
ctcctctctagtgacttctctctgtctggggccaccccgggcctcactggctctgtatct
ggcgggctgggggactctagttacgcttcaggccgtgaagtagagtcttgtttggtgggt
gtcgtcgtcggtggtggtggtgatgttggattcacggtagctagcgatggcgtggagtcg
ttgtgtaccggctctctggttggcttctcgtcctcctggttgcctgcctatcctcacctc
cccctgcccacgtctgactggggggcggctagcctagcgctctactcctccggtagccat
ttagaccatctcctccattcatctctgggaggctcctccaacccatctggaggtcagcct
ctcttctcttcctcctcctctccccctgttcctcctctctcaggttcccatagtgacctg
ctcatttctgttacagccacaccgtccggctccaaggaccactgggtctcggccccctcc
tcctcctactcggcctcccccctcacccccaccctcccccctgaactgcagacggtagac
agtagtgcctctggcttgaatctgtcgggagaagcccaggaggagctagatgaggagtgg
gacagggttcagagttcagcctcgggggagggcgcgctcccttacatcccagccttcacc
ccctcgctcacctctgaagccgccgccactcccaacatcgacatagaagaactctcctca
tcgttctactttgagagcaagaacggcagtgccgtcaccacggatacagcgggcagcacg
gcaacagtatctggggtgaccgcggcggtgccctggtcgttaggtggggaggtggagagt
ggagagtggcagggcgagagcctgtacgacaacgagacgtcctcagacttcactatcacc
gagcgcacagagagagactctgaggaggagccagttgcagaagccagtaacagcagccat
gagtccagggtgggtctggccagggagagagagatgagggccatggtccctctggcagtg
gtctccaccctcaccttcctgggactcatcgtcctggtgggaatcctcatctactggagg
aagtgtttccagattgcccatttctacatagaggacaacacatcccccagagtcatatct
gtttcacccacatccatgcatacagatacagataaacatgaagcccttacagtgaagcag
tttgtcaagcacgtgaaggagctccaccacaccaatgcattctccagagagtttgagata
ttgaaagagtgttatgaggaggtgcaggcgtgcacggtggacctgggtatcaccgcagac
ggctccaaccatccagacaacaagaacaagaaccgatacatcaatatcctggcctatgac
cacagccgagtaagactctcaacccaggctgacaaagatgggaagagtggagattacatt
aacgcaaactacgttgacggtttcaacaagtccagggcctacatcgcagcccagggccct
ctcaagtccagcaccgaggacttctggaggatggtgtgggaacagaacgtgggcgtcatc
atcatgattaccaacttggtagagaagggacggaggaagtgtgaccagtactggcccctg
gagagccaggaagagtatggtggtttcctggtgacggtgaagagcagtaaggttctggcc
cactacacccagagaaccttcaccctcaggaacaccaaggtcaaaaaggtttctctgaag
ggtcggattaacgagcggaccgtgacccagtaccactacactcagtggccagacatgggc
gttcccgagtacactctgcccgtgctcaccttcgtccagaagtcctccaaagccaggaca
gatgacatggggcctatcgtagtgcactgcagtgcgggggttggcaggactggaacctac
atagtgttggatagcatgttgaagcagatcaaagaagagggcacggtcaacatcatgggc
ttcctcaaacacatccgcacacagaggaactacctggtacagacagaggagcagtatgtg
ttcatccatgatgctctagtggaggccatcttgggtaaggagacggaggttccctccagc
cgcatccacagctacgtcaacgacctcctgaccccagggccctccggcagtacgcagcta
gagaaacagtttaagctgatatcctcgtccaatgccatacagtgtgactactcagcagcc
ctgaaagagtgtaacagagagaagaacagaaactcctctttaatacccgttgaaaggtca
cgggtttgtctgtccacagtggcgggagaaactacatcagactacatcaacgcctcatac
ctcacggggtaccggcagagcactgagttcatcgtgacacaaaacccgctggccggcacg
gtgacagacttctggaggatgatctgggatcacaacgctcaggtcatagtcacactgccg
ggaacaccaagcctggcagagggggaggagccatacgtgtactggccccgcaaggagcag
ccaatcagctgtgaggcattcacagtgaccctgcggagcgagaaccacatgtgtctggcc
aacgaggagatgctggtggtgcagcactacgtcctggaggctacacaggatgactatgtt
ctggaggtgaggcactaccgggcgccgcagtggcccaacccagacagccctatcagcagc
acctttgagctgctcagcctggtgaaggaggagagctcctccaaggagggccccacggtg
gtccacgaccaggttggcggtgttactgcgggaaccttctgtgccctgtctactctggtg
cgccaactagaggcggagagctctgtggacgtgtaccaggtggccaagatgttcaacctc
atgaggcccaggaccttcactgatgttgagcagtatcagttcctatacaaagccatgctg
agtctggtgggcacacaggaggacgagaggatgctccagtcctcagacaacaacggaacg
gtcccagggggcaccgcagagagccttgagtccctggtgtaa
DBGET
integrated database retrieval system
