Salmo salar (Atlantic salmon): 106584646 Help Entry 106584646         CDS       T04363                                  Name (RefSeq) aggrecan core protein-like   KO K06792   aggrecan 1 Organism sasa  Salmo salar (Atlantic salmon) Brite KEGG Orthology (KO) [BR:sasa00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:sasa00535]     106584646    00536 Glycosaminoglycan binding proteins [BR:sasa00536]     106584646    04091 Lectins [BR:sasa04091]     106584646 Proteoglycans [BR:sasa00535]  Extracellular matrix (ECM) proteoglycans   Aggrecan / versican family    106584646 Glycosaminoglycan binding proteins [BR:sasa00536]  Hyaluronan   Extracellular matrix or blood plasma proteins    106584646 Lectins [BR:sasa04091]  C-Type lectins   Lecticans    106584646 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Xlink Lectin_C Sushi V-set EGF Motif Other DBs NCBI-GeneID:  106584646 NCBI-ProteinID:  XP_014025614 UniProt:  A0A1S3PDU5 LinkDB All DBs Position ssa23:complement(41808367..41833370) Genome browser AA seq 1329 aa AA seqDB search MMTLLLLCVCLPFITSTISFEDPGDLDSNLSVSIPVEVALHPLMGTKVVVPCYFQDNMVN DPGTSTVTPLSHRIKWTYVTKGKATLILLASEGKVHVETEYLDRVTMVNYPLVPTDVTME ITELRAKDSGTYRCEVMHGIENNYDWVDIQVQGIVFHYRAVSTRYTLNFERAKAACIQNS ATIATPAQLQAAFDDGFHQCDAGWLSDQTVRYPIHEPREGCFGDKEEFPGVRTYGLREVN ETYDVYCFAQKMSGRVFYSMSVEKFTFYQAMDQCAKLGAKLATTGQLYLAWKSGMDVCNA GWLADGSVRYPINIVRPQCGGGQLGVRTVYLFPNQTGYPYPDSHYDAICYQEDDGAVKTT PFPEVATITDSPMVYPGLTTTPETEARGEVLTQGPLDTITMAPTLPIPPSVTDTVTKVTP VVGEAIISRVTAKPDVGFEFPLDNDTAMAPTGVVFHYRADSSRYALSFVEAQMACQSVGA VIASSQQLQAAYEAGLHHCDAGWLRDQTVRYPILSPRDKCSGNLENVPGVRSYGLRPATE QYDVYCYVDRLKGELFYSSDYDSFSYEEAVAHCQKLNTTLATTGQLYAAWRQGFDKCRPG WLQDRSVRYPIHAPRPHCGGGKAGVHTIYAFPNQTENPDQHSRYDAYCFRAERVIIHTET RLNVTLVVEEEIINMTTRTDQLTPVSPIEPPVSVDVSGSASADHSSSGSGSGTPGHSGYT SGRASGEGSGSGFQVTFEGSGPILSGEGSGSGSGDPQEAGEGSTTVTNPPKFSESGDSGS GVGVGEFSGGLPSSVLPHSGSSSGVSEDLSGSGDSVIIIVDGEMVDISKRQPTGQEFGQG GVDISGSGGMSGLYGLFSGDVTSTSGSGSPDISFTHSGLIDLTDQPSGEQEVSGYQTFSS GFSSGFPSGFPSGFHSGSGFPSSRDKAHSGHEVIFLTDDGMMEVTARQGEQRPEQGRGYV EVSGDSSSQHEGSTSASGLSLGESPFAEGLSVVLPPGSTMTYPENIGSLGNTDRGDDLDL VEEGQEQKGLGGSTETIYVTAPSAVFPSMTTAPAVSMVNPAVVEEPAAVYATTEPCEPNP CGAGTCSVEDGVALCQCPHGFAGEENCSTPVQGCAEGWVEFMGSCYLHFAERDTWPDAEQ RCQELNAHLVSITSQQEQEFVNSNAQDYQWIGLNDKDVQNEFRWTDGSPLEFENWRPNQP DNYFNSWEDCVVMIWHENGQWNDVPCNYHLPFTCKSGPVMCHSPPEVANARPMGSRKERY PVNSIVRYQCDAGFTQRHPPVVRCRPDGRWEEPQVECIEPGATPSNRLHKRSIRRRSKAA NSQSWRKRL NT seq 3990 nt NT seq  +upstreamnt  +downstreamnt atgatgaccttgctcctactgtgtgtgtgtcttcccttcatcacctcaactatatcattt gaagaccccggcgatctcgacagtaacctgagtgtcagcattcccgtggaggtggcgctg caccctctgatgggcaccaaggtggtggtgccctgctacttccaggacaacatggtcaac gaccccggcacatccactgtcactcccctgtcccaccgcatcaagtggacctacgtcacc aagggcaaggccaccctcatactgctggcgtcagagggcaaagttcacgtggagacggag tacctagaccgggtcaccatggtcaactacccgctggtgcccaccgacgtcaccatggag atcacagaactgcgtgccaaggactcgggcacttaccgctgtgaggtcatgcacggcatc gagaataactatgactgggtggacatccaggttcaaggcattgtgttccactaccgagcc gtctccacgcgctacactctgaactttgagagggccaaggctgcctgtatccagaacagt gccaccatcgccaccccagcacaactacaggctgcctttgacgatggcttccaccaatgt gacgccgggtggctctctgaccaaacagtcaggtatcccatccatgagcctcgtgagggt tgcttcggagacaaggaggagttcccgggagtgcgaacctacggcttgagagaggtcaac gagacttatgacgtgtactgctttgcacagaagatgtcaggcagagtgttctactccatg tccgtggagaagttcaccttctaccaggcaatggaccagtgtgccaaactaggggccaag ctggccaccacagggcagctgtacctggcctggaagtctggcatggacgtgtgtaatgcg ggctggctggcagacggaagcgtccgctaccccatcaacattgtcaggccccagtgtggt ggaggacaacttggagtgaggaccgtgtacctgttccctaaccagacaggctacccctac ccggactcccactatgatgctatctgctaccaagaggacgacggtgcagtcaagaccacc ccgttcccagaggtggccaccatcacagacagtcctatggtctatccagggctaacaacc acccctgaaactgaggcaaggggggaggtgctgacccaaggccccctggacaccatcacc atggcaccgaccttacccatcccacccagtgtgactgacacggttacgaaggttaccccg gtcgtgggggaagcgatcattagcagggtgacagctaaacctgatgtgggcttcgagttc cctcttgacaatgacactgccatggctcctacaggtgtggtgttccactaccgtgctgac tcaagtcgctatgccctgtccttcgtggaggcccagatggcctgtcagagtgtgggtgcg gtcatcgccagctcccagcagctacaggcagcctacgaggcagggctccaccactgtgat gcaggctggctcagggaccagaccgtcaggtaccccatcctgtctcccagagataagtgt tcaggaaacctggagaatgtcccaggggtgaggtcctatggcctgagacctgctactgag caatacgacgtctactgctatgtggaccgcctcaagggggagctgttctattccagtgac tatgacagcttctcctatgaggaggctgtagcccactgccagaagctcaacaccacgcta gccaccacagggcagctctatgccgcctggagacagggcttcgacaagtgtcgtccaggc tggctgcaggatcgcagcgtccgctaccccatccatgccccaaggccccactgtggaggc ggcaaggccggggtacacaccatctacgccttccccaaccagacagaaaacccagaccag cactccagatacgatgcatactgcttcagagctgaacgtgtgattattcatactgaaacc agactcaacgttactctagttgtcgaggaggaaattatcaacatgacaacgagaacagac caattgacgcctgtgagccccatcgagccacctgtctctgtggatgtgtctggttcagcc tcagctgatcattcatccagtggtagtggcagtggaactcctggccatagtggatacaca tctggtagggcaagcggcgagggctcagggtctggcttccaagtcaccttcgagggcagt ggacccatcttgtctggagagggctctggctctggctctggagatcctcaggaggcggga gaggggagtaccactgtcaccaaccccccgaaattcagcgagtctggggatagtggatct ggggtgggggtgggagagttcagtggtgggctaccgtccagtgtccttccccactcgggt agtagcagcggagtatctgaggacctgagtggtagcggggactctgtcatcatcattgtg gacggagagatggtggacatctccaaacggcagcccaccggacaggagtttggacaagga ggtgtggacatcagtggctctggaggaatgtctggattgtatggcctcttcagcggggat gttaccagcacctctggttccggaagtcctgacatatctttcacgcattcaggtctcatc gacctgaccgatcagccctcgggagagcaggaagtctccggctaccagaccttctcttct ggtttttcaagcggtttcccctccggttttccatctggttttcacagtggctctggattc ccatccagcagggacaaagcccattcaggccacgaggtcatcttcctgacagatgatggg atgatggaggtgacggcacgtcaaggggagcagcgtccagagcagggacggggttacgta gaggtcagtggagacagcagtagccaacatgaagggagcacctcggccagtgggctctcc ctgggggagtcaccatttgcagagggcctgtctgtggtgctgccgcctggttcaaccatg acttacccagagaatatcggcagtcttggaaacacagacagaggggatgacctggatctg gtggaggaaggccaagagcagaaagggctgggaggttccacggagacgatctatgtcacg gcaccatcggcagtcttccctagcatgacgacagcacccgccgtctcgatggtgaaccct gctgtggtggaggagcctgctgcagtgtacgctactactgaaccttgtgagcctaacccg tgtggagcaggcacctgctctgtggaggatggcgtcgctttgtgccaatgcccacatgga ttcgctggagaggaaaactgcagcacaccagtgcagggctgcgccgagggctgggtggaa ttcatggggagctgctacctgcactttgctgagagagacacctggcctgacgctgagcag cgctgccaagagcttaacgcccacctggtcagcatcacctcccaacaggagcaggagttt gtcaactctaacgctcaggactatcagtggattggactcaatgacaaggacgtgcagaat gagttccgctggacagatggcagtccattggaatttgagaactggaggcccaaccagccg gataactactttaactcttgggaggactgtgtggtgatgatctggcacgagaacggccag tggaacgacgtgccctgcaactaccacctgcccttcacctgcaagagtggacctgtcatg tgccactcgcccccagaggtggccaatgccaggccgatgggcagcagaaaagagcgttac cctgtcaactctatagtccgctaccaatgtgacgcaggcttcacacagcgccacccgcct gttgtacgctgccgtcccgacgggcggtgggaggagccccaggtggagtgtatagaaccc ggtgccacacccagcaacagactacacaagaggtccatcaggagacggtctaaagcagcc aacagtcagtcatggaggaagcgtctctaa

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