Salmo salar (Atlantic salmon): 106584730
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Entry
106584730 CDS
T04363
Symbol
fan1
Name
(RefSeq) FANCD2 and FANCI associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
106584730 (fan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106584730 (fan1)
Enzymes [BR:
sasa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
106584730 (fan1)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
106584730 (fan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
MFS_3
Motif
Other DBs
NCBI-GeneID:
106584730
NCBI-ProteinID:
XP_014025736
UniProt:
A0A1S3PDI8
LinkDB
All DBs
Position
ssa23:43918373..43954397
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AA seq
1067 aa
AA seq
DB search
MAEKGNKRKQRSLSVTKRKGYVSSKGGKKSANACPGTASISSFFNNAPPPRLPCPLCGQL
VPRFRINQHIDSQCQNFQREDGASIDTASACNIVTTTKLASSRSPSRKASKVHDPDTGPS
SAKEEKPQREVNTSPYFKKSGASSQQVNTREMSSKTVVRPIDIGSRLSSKLSRRGLKQRL
KSPEDLQSQVDDIITIQESPEKDRRSEELSSSQKENHLPQGFGDQTTCLMDTETTNVTVE
SHSTISLGRPQVESREETLECLESESKLESLSPVVSMAPRPLSCAPSRLNKRKKGGRAEV
SVKTQRMSTRSKKGRCEKRDGEEPDDDLTRNQLLTSTTTTADGDKQHGTEESSTGNCDTR
LKSSSEVPEEERQRRKVKLEEEEGEEEESTVTGSSDQLTEPDTDRRTDEQDSESPRLPYY
LGNFLTVLEAVLENEDDRMLFNQLDLSAIHGFERLSVTGQKLYVRLFQRKLKWLQVNKLN
YNEISTDLGPVAQELVEGGFLQTDSDLQDLEEVLDLLPAPELRSLAKTFHLGGPGSGTQK
HQLVEGLLKLSRQRSLFALAPGQNNIGTVILKRAKQLAGSCVRLHRGPRAVFSRVLLLFS
LTDGLEEEETAGGGQGQLYTILLVNSGRLAFPDYTIQRRAKLFLDREDLIRYEAAMRALQ
EVITAMQTGHWEDALALYTAAKTTWQEMSKTYDLSHQEALPVFLRCFTTGWAYTRILSRG
VEVLQRLRCYKEAVKELRSLLAQSVYCPDSRGRWWDRLALNLQQHLKLPEQAISAIRDGL
ADPLVRTGHQLSLHQRANRMKESPSYKNYHPVLSDLPTIHINDVTHVTIRGQLFPHEGGT
GKNVFLMPAEEGAEGGYSTVMCSVEELSLAHYRRQGFDQGIHGEGSTFSTLFGLLLWDVI
FMEGIPDVFRNPYQPCPLDLFTDCFYGNRREAIETRVQVLCEASIETLHNLMAEAWTNQE
GRVCSLVNWERFASLQRAQSLVSCLGGSFLGGMITRMAKDYRHCRAGLPDLVVWNTSNNT
YKLVEVKGPSDKLSQKQQIWLDELQRLGADVEVCHVTATGARGAWLE
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaaaggaaacaaacgcaaacagagaagcctctcagtaacaaagagaaaagga
tatgtcagtagtaaaggtggtaagaagagtgccaatgcatgtcctggtacagcctccatc
tcatcattcttcaacaacgccccgccacctagacttccatgtcctctgtgtggtcagctt
gtgccacggttcaggataaaccaacacattgactcacagtgtcagaactttcagagggaa
gatggtgcgtccattgatactgcttcagcctgtaacattgttactacaacaaagctggca
tcgtctcgctctccttccaggaaggccagtaaggtccatgatccagacacagggccttcc
tctgcgaaggaggaaaagcctcagcgagaggtcaacaccagcccgtactttaaaaagtct
ggtgcttcttctcagcaggtaaacaccagagagatgagcagtaagactgtagtcaggccc
attgacataggtagcaggctgtcctctaagctctccaggaggggcctgaagcagaggctg
aagtcccctgaggacctacagtcgcaggtcgatgacatcatcaccatccaggagtcccca
gagaaagacagaaggtctgaggagctgagcagctctcagaaggagaaccacctccctcag
ggatttggtgaccagacaacatgcttaatggacacagagacaacaaatgtcacagtggaa
agtcacagtactatatcactgggcagacctcaggtagaaagcagagaagaaaccttagaa
tgtttagaatctgaatctaaattagaatcattgtctccggtagtttctatggccccgcga
cctctgtcctgtgctccatccagactgaacaagaggaagaaaggagggagagcagaggtc
tctgttaaaacacagaggatgtctactcgcagcaagaaaggcagatgtgagaagagagat
ggtgaagaaccagatgatgacctcactagaaaccaactccttacgtcaacaacaacaaca
gctgatggtgataagcaacacggaacagaagaatcttcaactggtaactgtgacactcgt
ttgaagagcagctcagaggtgcctgaggaggagcgtcagagaagaaaagtaaaactagag
gaagaagaaggagaagaagaagaatccacagtgactggtagcagtgatcagctgacagag
cctgacacagacagaagaactgatgagcaagattcagagtcaccacggttaccatactac
ctgggtaacttcctgaccgtgctagaggcagttctggagaatgaagatgataggatgctg
ttcaatcaactagacctttcagccatacatggctttgagcgtctgtcagtgacaggacag
aagctgtatgtgagactgttccagaggaaactgaagtggctccaggtcaacaagctaaac
tataatgagattagcactgacctgggacctgtagctcaggagctggtggaaggaggtttc
ctacagacagacagtgacctccaagatctggaggaggtgctggacctgctgcccgccccg
gagctccggagcctggctaagacgttccacctggggggccctgggtctggtacccagaaa
catcagctggtggagggactcctgaagctgagcagacagaggtctctgttcgccctggcc
cctggacagaacaacattgggactgtcatactaaagagggcaaagcagctagctggttcc
tgtgtacgtctgcatcgcggccccagggctgtgttctctcgcgtcctcctcctcttctcc
ctgacagatggtctggaggaggaggagacggccggagggggtcagggtcagctctacacc
atcctactggtcaactctggccgactggccttccctgactacaccatacagcgcagagcc
aaactgttcctggatagagaagatcttatcaggtatgaggcggcgatgcgagcgctgcaa
gaggtgattacagccatgcagacaggccactgggaggacgctctggcactttacactgca
gccaagacgacctggcaggagatgagcaagacgtacgacctcagccaccaggaagcgctg
ccagtgttcctgcgctgtttcaccacagggtgggcctacacacgcatcctgtccagggga
gtagaagtactacagagactacgttgctacaaggaagcggtgaaggagctgcgctcccta
ttggcccagtcagtctactgtccagacagcagggggcgatggtgggacagactggcactc
aatctccagcagcacctcaaactacctgaacaggctatcagcgccatcagagacggtctc
gctgaccccttggtgaggacgggccaccagctttcactccaccagagagccaataggatg
aaggaatcccccagctacaagaattaccaccctgtactcagtgacctgcccaccatccac
atcaacgacgtcactcatgtcactatccgagggcagctcttcccccacgagggggggaca
gggaagaatgtgttcctcatgcctgctgaggagggggcagagggaggatactccactgtc
atgtgttctgtggaagagctgtcactggcacactaccgtcggcaaggctttgaccaaggg
atccatggagaaggctccacgttttccactctgtttggtcttctgttatgggacgtcatt
ttcatggagggtattccagatgtcttccggaatccctaccagccctgcccactggacctc
ttcacagactgtttctatgggaaccggagggaggcgatagagacgcgtgtgcaggtgctc
tgtgaggcgtccattgagacgctgcacaacctgatggccgaggcctggaccaatcaggag
gggagagtgtgttcactggtcaactgggagcgcttcgcatccctgcagcgggcacagagt
ctcgtgtcttgtctgggtggatcgtttctgggagggatgatcactaggatggccaaggac
tacagacactgtcgagcaggactgcctgacctagtggtgtggaacacatccaacaacacc
tacaagttggtggaggtgaagggccctagcgacaaactgtcccagaagcaacagatctgg
ctggatgagctacagagactgggggctgatgtagaggtctgtcacgtcactgccactggg
gccagaggagcttggctggaatag
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integrated database retrieval system
