Salmo salar (Atlantic salmon): 106584741
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Entry
106584741 CDS
T04363
Symbol
myo5c
Name
(RefSeq) myosin VC
KO
K10357
myosin V
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
106584741 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106584741 (myo5c)
04131 Membrane trafficking [BR:
sasa04131
]
106584741 (myo5c)
03029 Mitochondrial biogenesis [BR:
sasa03029
]
106584741 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
106584741 (myo5c)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
106584741 (myo5c)
mRNA cycle factors
P-body specific factors
106584741 (myo5c)
Membrane trafficking [BR:
sasa04131
]
Others
Actin-binding proteins
Myosins
106584741 (myo5c)
Mitochondrial biogenesis [BR:
sasa03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
106584741 (myo5c)
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
106584741 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
Myosin_N
Csm1_N
AAA_16
NPHP3_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
106584741
NCBI-ProteinID:
XP_014025752
UniProt:
A0A1S3PDR3
LinkDB
All DBs
Position
ssa23:44177933..44210590
Genome browser
AA seq
1751 aa
AA seq
DB search
MALSELYTKYNRVWIPDAEHVWKSAEILRDFKPGDDTLKLQFEDGTEMMYPLDKSSPQLP
HLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESNIIYSYCGIILVAVNPYKQLHIYG
DAVIQAYSGQNMGAMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYVMRYF
AMVSKSSSKTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYQIIGANMR
TYLLEKSRVVSQSENERNYHIFYQMCACAEQSEFKSLRLLSADEFRYTCMGGETGIEGVD
DRKDMEETRRTFSLLGLTEDFQSDVFKVLAGILHLGNVEIRNVGSDRSSVSSSDQHLAAF
CDLLGVSPDGVTRWLCHRRIAMVAETVVKPVPSERAVNARDALAKQIYAHLFDCVIQKIN
AALQVPGKQHSFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQDEYMKE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQNWLQKLYNYQADNLLFEKP
RMSNEAFIIQHFADKVEYQCWGFLEKNRDTLYEELVDTMRTSKFPLLANFFLEVEPAGLG
TKGIKVRPARPGVKPANKNHRTTVGEKFSSSLYLLMESLNATTPHYVRCIKPNEEKMPFE
YDSKRVVQQLRACGVLETIHISAQSYPSRWTYIEFYSRYSILMSQEELGLNHKKLACKTV
LQRLIQDSDQNKFGRTKIFFRAGQVAYLEKLRLDRLRKACLTIQKHVRGWSHRRKFLRMR
EAAIVLQQYVRGQRQICKTVTAAALKQGWAAVVIQRYWRSYLTRLIYRMVRSSSIIIQAF
TRGWIARKHYKKMVEVQKALVLQKYARAWLARRRFQSLRRLVHNVQLSYRCQQLRKKLED
QAKENCGLLERLTGLAGAHTQGLDKLRCLEAQLGKSATEKALLEEREKKSREDAVKTIAQ
LQEEKDKLIVEKQNLEKKLADSATEMKDSFDQIKTTLKEDLEREERLRKIAENNLELQKE
DHEKEVELQKEDHEKEMEVLREENRRLKEERVGLQRQTEEEAQVNTDLQDQVIQLTRHVT
VIPELRKDLHNLQTQRDDLGRKMKKQSEQARAKMSVITRQLLCGVVEEEVISRLTFDSPD
QIYEVGDLLTEFDGLQKATRVLERHQQEQKEGYDSQIEGLTFKVEHLQNQNNQLQKLFQE
KTSVNDSISQEVARLNTENMVIPELKKQVSELQRHKQELEVQLEEQARKMTGRCKIEEIS
KALQMNVEEEGSRSRYMEREKEEMEREKEEVEREKEEMEVLRKQKNTESEAKARFSQEAS
RLTAENMDFEEQLDMKDRLIRKLQNQIKSLQTSEEANQTPAPTITNEYLGMLEYKREDEA
KLIQYVILDLKPRGVLVNMIPNMAAQLLFMCVRHADYLNDGAKLKSLMNAIISGVKKVIT
DHQEDFELLSFWLSNTYHMLSCLKQYSGEEEFMKQNTPRQNKNCLQNFDLSEHRQIFSDL
AIRIYHQFISVMEKTLMPMIGPGMLEYESLQDISSMKPTGFRKRSSSIYEDQEVCTIYSL
LQQLSLYHSTMSQHGMEEGLVRQAVKQTFFLVGAETLNSILLRKDMCSCRKGMQIRCNIS
YLEAWLKEKDLVTGTMATLKPLSQAAWLLQVNKTTDDDIKDITEQCSELSPVQIVKILNS
YTPTDDFEKRVAPSFVRKVQGLLQDREGGSSQLMLDTQYRFQVTFPFTPSSQALELLQIP
SSLRLDFLTRI
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atggctttgtcggaactctatacgaagtacaacagagtgtggataccggatgcagagcat
gtctggaagtcagcagagatcctgagagacttcaaacctggagatgatactttaaaactg
cagtttgaggatggcactgagatgatgtaccccctggacaaatccagtcctcagctccct
cacctccgcaaccctgatatcctggtgggagagaatgatctgacagctctcagctatctc
cacgagcctgccgtactacacaatctcaaagtgcgcttcgtggagtccaacattatctac
agctactgtggaatcatcctggtggctgtcaacccatacaagcagcttcacatctatgga
gatgcagtcattcaggcgtactctggacagaacatgggagctatggaccctcacatattc
gctgtggcagaggaggcttacaaacagatggccaggaacaataagaaccagtctattata
gtgagtggtgagtctggagcgggaaagactgtgtctgctaggtatgtcatgaggtacttc
gctatggttagcaagtctagcagcaaaacacgcgtggaagacaaagttctggcatccaat
ccaataactgaggctataggaaatgccaagacgaccaggaacgacaacagcagtcgcttt
gggaagtacacagagatcagcttcgacaggagatatcagatcatcggggccaacatgagg
acgtatctcctggagaaatctagagtggtttcccagtcagagaacgagagaaactaccac
atcttctaccagatgtgtgcctgtgcagagcaatctgagttcaagagcctgagattgttg
agtgcagatgagttcaggtacacctgcatgggcggggagacaggtatcgagggggtggac
gacaggaaggacatggaagagacacgcaggaccttctcgctgttggggttaacggaggac
ttccagtcagatgtgttcaaggtgctggctgggattctacacctggggaatgtagagatc
agaaacgttggatcagacagatcatcagttagttccagtgatcaacacctagctgctttc
tgtgaccttctcggggtcagtcctgatggtgttacccgttggctgtgccatcgcaggata
gccatggtggcagagacggtggtgaagcctgtgcccagtgaacgggctgtgaacgccaga
gatgccctcgccaagcagatctatgcccacctgttcgactgcgtcatccagaagatcaat
gcagccctgcaggtgccagggaaacagcactccttcataggagtactggacatctatgga
tttgaaacatttgacatcaacagttttgaacagttttgcatcaactatgccaatgagaag
cttcagcagcaattcaacttgcatgtgttcaagctggagcaggacgagtacatgaaagag
gatattccctggactctgatagacttctatgacaaccagccggtcattgacctgattgaa
gctaagatgggcatcctggacctgctggatgaagaatgtctgttcccccagggtacagat
cagaactggcttcagaaactgtataactaccaggctgacaaccttctgtttgagaagccc
aggatgtccaacgaggccttcatcattcaacactttgctgacaaggtagaatatcaatgc
tggggttttctagagaagaacagagacacactgtatgaagagctggtggataccatgaga
accagtaagtttcctctcctggccaacttcttcctggaggtggagccagctgggttgggc
actaaaggcatcaaagtgaggcctgcccggcctggggtgaaaccagccaataagaaccac
aggaccactgtgggagagaagttcagcagttctctgtacctgctgatggagagtctgaac
gccaccacccctcactatgtacgctgcatcaagcccaatgaggaaaagatgccgtttgag
tatgactcaaagcgggtggtccagcagctgagggcgtgtggagtcctggagaccattcac
atcagcgctcagagctacccctccaggtggacgtacatagagttctacagccggtacagt
atactgatgagtcaagaggagctgggcctcaaccacaagaaactggcctgtaagacagtg
ctgcagaggctaattcaggactcagaccagaacaagtttggccggaccaagatcttcttc
cgagcgggtcaggtggcctacctggagaagcttcgattggaccgtctccgaaaggcatgt
ctgaccatccagaagcacgtgagggggtggagccacaggaggaagttcctacgcatgagg
gaggcggccatcgtcctccaacagtacgtccgtggacagcggcagatatgtaaaacggtg
acggctgcagcgttgaagcaaggctgggctgctgtggtcattcagaggtactggagaagt
tatctgaccagactgatctatagaatggtccgttcctcctctatcatcatccaagccttc
actagaggctggatagccaggaaacactacaaaaagatggtggaggtgcagaaagccctg
gtgttgcagaagtatgcccgggcgtggctcgccaggagacgcttccagagcctgcgccgc
ctggtacacaacgtacagctctcctacaggtgccagcagctcaggaagaaactggaagat
caggccaaagaaaactgtgggctgttggagaggctgacaggtctggccggtgctcacacc
caaggtctagacaagctgcgctgtctggaggcccagctggggaaatcagccactgagaag
gctttgctagaggagcgagagaagaagagcagggaggatgccgtgaagacgatagctcag
cttcaagaggaaaaagacaaattaatcgttgaaaagcagaacttggaaaagaagcttgca
gattcagcaacagagatgaaagacagctttgatcaaatcaagacaactctgaaagaagat
ctggaacgagaagaaagattgaggaagattgcagagaacaaccttgagctgcagaaggag
gaccatgagaaggaggtggagctgcagaaggaggaccatgagaaggagatggaggttctg
agggaggagaacaggaggctgaaggaggagagagttggcctacagagacagacagaggaa
gaggcgcaggtcaacactgatctacaggaccaggtcatacagctcaccaggcacgtcacg
gtgatacccgagttacgtaaagatcttcacaatctccagacccagagagatgatctgggc
aggaagatgaagaagcagtcagaacaagccagagccaagatgagtgtgatcacaagacaa
cttctttgtggcgtggttgaagaggaggtcatttccaggttgaccttcgacagtccagac
cagatctatgaagttggggatttgttgactgaatttgatggactgcagaaagctaccaga
gtgctggagagacaccagcaggaacagaaggagggttatgacagccagatagaggggctg
acgttcaaggtggaacacctgcagaaccaaaacaatcagctgcaaaaactgttccaggag
aaaacgtctgtcaacgacagcatcagccaggaggtggccaggctcaacactgaaaacatg
gtcatacctgagctgaagaagcaggtgtcagagctacaacgacataaacaggaactggaa
gttcaactggaagagcaggccagaaagatgacaggtagatgcaaaattgaggagatttca
aaagcgcttcagatgaatgttgaagaggaaggctcccgtagcaggtacatggagagagag
aaggaggagatggagagagagaaggaggaggtagagagagagaaggaggagatggaggtg
ctcaggaaacagaagaacacagagagtgaggccaaggccagattcagtcaggaggcatca
cgactcactgcagagaacatggactttgaagagcagctcgacatgaaggacaggttgata
aggaagctacaaaaccaaatcaagagccttcaaacatccgaggaagccaatcaaacacca
gcgcccactattaccaacgaataccttggcatgttggagtacaagagggaggatgaagcc
aagctcattcaatacgtcattctggacctgaagcccagaggggtactggttaacatgatc
cccaacatggctgctcagcttctcttcatgtgtgtccgtcatgctgactaccttaacgac
ggagccaagctcaagtctctcatgaacgccatcatcagtggggttaaaaaggtcatcacg
gatcaccaagaagactttgagttgctatcgttctggctgtccaacacgtatcacatgctc
agctgcctgaagcagtacagtggagaagaggagtttatgaaacagaacactccgcgccag
aataagaactgcttgcagaactttgacttgtctgaacacagacaaatcttcagtgatctg
gccatccgtatctaccaccagtttatatctgttatggagaagactcttatgcccatgatc
ggtcctggtatgctggagtatgagagtctccaggacatctctagtatgaagcctacaggt
ttccgtaagcgttccagcagcatctatgaggaccaggaggtctgcaccatctactctctc
ctccagcagctcagtctgtaccacagcactatgagtcagcacggcatggaggaggggctg
gttagacaggctgtgaaacagaccttcttcctggtgggcgcggaaacactcaacagcatc
ctgctacgcaaagacatgtgttcctgtaggaagggaatgcagattaggtgtaacatcagt
taccttgaggcgtggctaaaggagaaggacctagtgacgggtaccatggctactctgaag
cctctgtctcaggctgcctggctgctgcaggtcaacaagaccactgatgacgacatcaaa
gacatcacagagcaatgctcagaactcagccctgtacagattgtcaagattttgaactct
tacacgcccactgatgattttgagaaaagggtggcaccgtcattcgtccgcaaagttcag
ggcttgctccaagaccgtgagggagggtcctcccagctgatgctggatacccagtatcgt
ttccaagtcaccttccccttcaccccgtcctctcaggccctggagctactgcagatacca
tccagcctcagactggacttcctcaccaggatctaa
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integrated database retrieval system
