Salmo salar (Atlantic salmon): 106584815
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Entry
106584815 CDS
T04363
Symbol
ddb2
Name
(RefSeq) damage specific DNA binding protein 2
KO
K10140
DNA damage-binding protein 2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03420
Nucleotide excision repair
sasa04115
p53 signaling pathway
sasa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106584815 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
106584815 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
106584815 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106584815 (ddb2)
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106584815 (ddb2)
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
106584815 (ddb2)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
106584815 (ddb2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
106584815
NCBI-ProteinID:
XP_014025888
UniProt:
A0A1S3PDX7
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All DBs
Position
ssa23:complement(46954214..46972823)
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AA seq
501 aa
AA seq
DB search
MARAKKAPSEASESKQKSRKQNGETSGAAGQTISKKLQQKMDGKTTLRTGPVLPTTMTKS
SVGKRSGPGSILHYIYQSTLGQSLHSQMRQCLQKPFVRTLSSYTLHRTASPFDRRVTCLA
WHPSHPTTLAVGSKGGDVVLWDYSVINKTSFIQGVGPGGSITALKFNPYNPTQLFTSSVR
GTTTLQDFNGTTLRVFTNTESWDLWYCCVDVSLSRQMLVTGDNIGRVLLLGMDGHQVFNE
KLHKAKVTHAEFNPRCDWLMATASVDHTVKLWDLRNIKDKNSYLHEMVHDKAVNSAYFNP
VDCSKLLTTDQYDQIRVYSSSDWSTPQRIIQHPHRQFQHLTPIKASWHPLYDLMVVGRYP
DERVCPGALRTIDIYDANTGELACQLLDPNAPGIISVNKFNPMGDVLGSGMGVNILVWNR
SETFAGKQQRGELQQEAGFQVGRGRGQRRRRGEARRRGEGRGEDEDDIGKLKKKLSSSSA
TRTRTSRDKQHNSQTQKGPDK
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcacgggcaaagaaggctccttcagaagcgtctgaatcgaagcagaagtcgaggaag
cagaatggagaaacgtctggggccgcaggacaaaccatctccaagaagctacagcagaag
atggacgggaagaccacattgagaacagggcctgttttaccaaccaccatgaccaaatct
tcagttgggaaaagaagtggaccaggaagcatcctgcactacatttaccagagtacactg
gggcagagccttcattctcagatgagacagtgtctccagaagccgtttgtacgtaccctg
tcctcctatacgctccaccgtacagccagtccgtttgaccggcgggtcacctgtctggcg
tggcacccctcacaccccaccaccctggcggtaggctccaagggaggagacgtagtcctc
tgggactacagcgtgatcaacaagaccagcttcatacaaggggttggtcctggaggctct
attacagctctgaagtttaacccttacaaccccactcagctgttcacctcatctgtcagg
ggaaccaccacgctgcaggatttcaatgggaccactctccgcgtgtttaccaacacagag
tcatgggatctgtggtattgctgtgtagatgtgtcgttgagcagacagatgctggtgaca
ggagacaacataggacgagtcttattgctgggcatggatggacaccaggtcttcaacgag
aagttacacaaggctaaagtgacccatgctgaattcaaccctcgctgcgattggttaatg
gcgacagcgtctgttgaccacacggtgaagctgtgggacctgaggaacatcaaagacaag
aacagttacctccacgagatggttcatgacaaagctgttaactcggcctactttaatcca
gtggactgctccaagctcctgaccacggaccagtatgaccagatcagggtgtactcctct
tctgattggtcaactcctcagcggattatccagcacccacacagacaatttcagcacctc
acacctatcaaggcctcgtggcaccctctgtacgacctgatggtggttggacggtaccct
gacgagagggtgtgtccaggtgccctgaggaccatcgatatctacgatgccaacacagga
gagctggcatgccaactactggaccccaacgcccctggcatcatatctgtcaacaagttc
aatccaatgggagatgttttaggatctggaatgggagtgaacatcctagtgtggaacaga
agtgagacatttgctggtaagcagcagagaggagagctacaacaggaagcaggattccag
gttggcagaggtagaggccagcggaggagaagaggagaggctcggaggaggggggaggga
cggggggaggatgaggacgacattgggaagctgaagaagaagttgtcttcctcctcggcg
accagaaccagaacatccagggacaaacagcacaacagccagacacagaagggtccagat
aaataa
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