Salmo salar (Atlantic salmon): 106584838
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Entry
106584838 CDS
T04363
Symbol
neil1
Name
(RefSeq) nei like DNA glycosylase 1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106584838 (neil1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106584838 (neil1)
Enzymes [BR:
sasa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
106584838 (neil1)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
106584838 (neil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
106584838
NCBI-ProteinID:
XP_014025911
UniProt:
A0A1S3PE75
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All DBs
Position
ssa23:48376748..48388441
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AA seq
385 aa
AA seq
DB search
MPEGPELHLASLFVNRMCEGVVFTGPVEKSEVSKNPEVSFSCPAYTIVATSRGKEVRLTL
TPQKSDSTLGRCRRVKAGQTIQVGTMDIVFRFGMSGFFRFTTEAELPKHSHLRFYTNEKP
RRVLSFVDTRRFGSWQPDGTWQPNRGPCIMFEYLSFRENVLSHMSDRAFDRPICEALLNQ
KYFNGVGNYLRAEILFRLNIPPFVKARTVLEGLQTHLSDEDRKSVVKVEVTDTEVTDKVK
EEVTDREISDRAAVKEDESETPDLLSLCHTVPLEVIKLGGKGYDPEKMDYTGFKSWLQCY
FVDGMKSIRDHNGRTMWFKGDPGPMAPKDAKSPKAKMTVKKEDDHDYTGGKKVKKARSES
TMKPKYRKETVQKKEVPRRRTGRRK
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagggtccagagttacacttggccagtctgtttgtcaacaggatgtgtgaaggg
gtggtcttcaccggcccagtagaaaaatcagaggtcagtaagaaccccgaggtctccttc
tcctgcccggcttacaccatcgtcgccacctccagaggcaaggaggtccgcctcactcta
accccccagaagagtgactctaccctggggagatgcaggcgggtgaaggcaggtcagacc
atccaggtcgggaccatggacatcgtcttccgtttcgggatgtctggattcttccgtttc
accacggaggcggagcttcctaaacattcccacctgcggttctacaccaatgagaagccc
cgtagggtactgagctttgtggacacacgccgttttggcagctggcaacccgacgggacc
tggcaacccaaccgagggccctgtatcatgtttgagtacctgagcttcagggagaatgtc
ttgtcccacatgtccgacagagcgttcgaccggccaatctgtgaggccctgttgaaccag
aagtactttaacggcgttggcaactacctgagagcagagatcctctttagattaaacatc
cctccctttgtgaaggctcggacggttctggaaggacttcaaacacatctgtctgacgag
gaccggaagtcggttgttaaagtggaggtcacagacactgaggtcacagacaaggtcaaa
gaggaggtcacagacagagaaatctcagacagagctgctgtgaaggaggatgagagtgag
actcctgacctgctcagtctctgtcacacagtacctcttgaggtcatcaagttaggtggt
aaaggttacgacccagagaaaatggactacactggctttaaatcgtggctccagtgttac
tttgtggacgggatgaagtccataagagatcacaacggcaggactatgtggttcaaggga
gacccaggtcccatggctcctaaagatgccaaatctcccaaagcaaagatgaccgtgaag
aaagaggatgaccatgattatacagggggaaaaaaggtaaagaaggcccgctcggagagc
acgatgaagccaaaatacagaaaggaaacggtgcagaaaaaggaagtccctcggagacga
acaggaaggaggaagtga
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