Salmo salar (Atlantic salmon): 106584873
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Entry
106584873 CDS
T04363
Name
(RefSeq) C-myc promoter-binding protein-like
KO
K20163
DENN domain-containing protein 4
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106584873
Membrane trafficking [BR:
sasa04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
106584873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
Motif
Other DBs
NCBI-GeneID:
106584873
NCBI-ProteinID:
XP_014025951
UniProt:
A0A1S3PEB5
LinkDB
All DBs
Position
ssa23:complement(49577827..49656698)
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AA seq
1530 aa
AA seq
DB search
MMEETGPRIADYFVVAGLTDSSKPLEEELQLDDIPGRFPRSAPGGRPLAPITDVAVVICS
LGEAVPQGYTCLESTPSGLSAELNGASLRGPQIYLCYKRGRDKPPLTDLGVLFEWKEKLK
PGCHIVQTTPSGRPANISSSSSQRIYITYRRSPQSQPHTSLAVTDVCIIIPGKGETPPHT
FCKVDKNLNSSMWGSSVYLCYKKSLAKTNTIAYNAGLLCRYPEEDDESFPLPESVPLFCL
PMGASIEFWPAHTKHSLPVFSTFVLTGASGDKVYGAAIQFYEPYPEDQLSERQRSLLGLP
GTCSSGEGTKSVHANKSICLLSHWPFFDSFRNFLTFLYRYSISGPHALPIERHISHFMHK
VPFPSSQRPRILVQLSPHDSLMLSQPVSSPLPLSGGRLSTLLLNLGPKNATTLLVLTVTE
HKILVHSLRPAVLTSVTEALVSIIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVDSRYF
DLYMPPPDVCCVDLDTNNILHKEEKRALTWKILPQKACKHLLNTLGSLYQQLTEGGQVNG
DDGLMEPTASDPDLASGGKSLHTLEMQIQEAFLRFMAAILKGYRSYLLPITQAPSERTTD
ASSLFDLQGFLKSRDRSHQKFYSQMIRTQMFIRFIEECSFVSDKDASLAFFDECVDKIQM
DSDVPEDTWLIELDESHRSEHTVYINPPELRSLAQGEEHPLCYSYSGFPVLSRDLLALQD
GPHPPSASLTQRHTSPASPAAIFRRSKQEIRSAQRMAKTHASVPQMWSKCLLRHCYGLWF
ICLPAYASACHSKVRALRMAYDILRKMQDKKLQAPDEVCYRVLMQLCGQYSQPVLAVRIL
FEMKKAGVHPNAITYGYYNKAVLESTWPSNTRGGYFLWAKLRNVVLGVGRFKQLGRKQMV
QNQTQSRDTQLSDYSDLDTVSHGSEDSTNDSVERVSIDTDFTKMDSSDDGSSTGGQSDQG
YDSLSKEEERMMGRDSDRTPLAQEKSERESCPLRRQDHITTPGDSNRPKNRRLRPNSLDL
TGGQRTLRTITLNFTSNTMQVRGPAPKRPPPPNCKPGKAEASQADPTQNQERLDGGEREE
IEGSKNRHTPAMEVGRRIVSCSGGDTERPATCSVSGDGTEAADCSVSGDGTEAADYSVSG
DGTEAADYSVSGDGTEAADCSVSGDGTEAADCSVSGDGTEASDCSVSKQSSVKNSGETVD
RAIKRTGIVETGFDPLSIIAAETETDTETEGDVDSSSTHAARRDLAEEIEMYMKVLSPLS
SRTASMDLQNPSSPLLHATSTPSKHSSHRPRPLSLTYSPCTSPRPLPPLLRANSQLPLSR
PKERLRPSSLVSPSSPTPSSTFSMDSLLTPTLSLDMFKSSFLSAGKGVAEKASRLYSRLS
SQTSLSQDVNCDQISVSSMTSVDPECTSLLEEGSVLDPEGFTSSYASPQHDSVTCLRRSP
ARGRLVSQSPTSPCKVFRHNSFSSGLAPPSRGPQTPDSSPDASRFHLRHHYTTEVLMCSC
SRCKTCDCLVYDEEIMAGWTAEDSNLNTTC
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggagaccggtcctcgtatagcagactactttgtggtagcagggctcactgac
tcctccaagcccttagaggaggaactgcagctggacgatattcctggtcgctttccccgc
tcggcccctggtggtcggcccctggcccccatcacagacgtagctgtggttatatgctca
ctgggggaagcggttcctcagggttacacctgcctcgagtccactccgtctggtctgtct
gcagagctgaacggagccagtctcagagggcctcagatttacctctgctacaagagaggt
cgcgataaacctcctctcactgatctgggggttctgtttgagtggaaggagaagctgaag
cctggctgtcacatcgtccaaaccactccctctggtcgccctgccaacatcagtagctcc
tcctcccagcgcatctacatcacctatcgccgctccccgcagagccagcctcacacgtca
ttggctgtcacagatgtctgcatcatcatcccgggcaaaggggagacgccccctcacacc
ttctgcaaggtggacaagaacctcaacagtagtatgtggggatcctcagtgtacctgtgt
tacaagaagtcactggctaaaaccaacacaatcgcttacaacgcaggtctgttgtgtagg
tacccagaggaggacgatgagtcctttcccctgccggagtctgttcctctgttctgttta
cccatgggagctagcatcgagttctggccagctcacaccaaacactccctgcctgtcttc
tctacctttgtactgactggggcttctggggacaaggtgtatggagctgccatccagttc
tatgagccgtacccagaggaccagctgagtgagaggcagcgttctctcctggggctaccg
ggcacgtgcagtagcggcgaggggacaaagagcgttcacgctaacaagagtatctgtttg
ctgtcacactggccgttctttgactcgttcaggaacttcctgacgtttctctacagatac
tccatctctggaccccacgctctgcccatagagaggcacatctcccacttcatgcacaaa
gtcccgttcccctcttcgcagaggccgcgaatcctagtacagctgtctccacatgatagt
ctgatgctgagccagcctgtctcctcccctctgcctctcagtggtggccgcctctccacg
ctgctccttaacctgggtcctaagaatgcgaccactctgctggttctgactgtaacagaa
cacaagatcctggtccactctctcagaccggccgtgctgaccagtgttacggaggccctg
gtgtcgatcatcttccccttccactggccgtgcccctacatccctctgtgcccgcttgcc
ctggcagatgttctctctgccccgtgccctttcatcgtgggcgtcgactcacgttacttt
gacctctacatgcctcctcccgacgtctgctgtgtcgacctggacaccaacaacatatta
cataaagaggagaaaagggccctaacttggaagatactaccacagaaagcctgcaaacat
ctcctcaataccctgggtagtctgtaccaacagctgactgaaggtggccaagtcaacggc
gacgacggtctgatggagcccactgcgagtgacccagacctggcgagcggagggaagagc
ctccacacgctagagatgcagatccaggaagcattccttaggttcatggcggccatattg
aaagggtaccgctcttacctcctccccatcacgcaggccccttccgaaaggaccacggac
gcaagctcgctgttcgacttgcaagggttcttaaagagccgggatcgttcccaccagaag
ttctactcccagatgatcaggacccagatgtttatccggttcatcgaggaatgttccttc
gtcagcgataaagatgccagtctggccttcttcgacgagtgtgttgataagattcagatg
gacagtgatgtcccagaagacacctggttgatagagctggacgagtcccatcgcagtgaa
cacactgtctacatcaaccctcctgaactaagatcgttggcacagggagaagagcatcct
ctctgttacagctactctgggtttccggtgctgagtcgtgatttgttggcgctccaggat
ggacctcatcccccctcagccagcctgacacagagacacaccagtccagccagccccgca
gccatctttagacgctccaaacaggagatccgctcagcccagaggatggctaaaacacac
gcctccgtcccccagatgtggtctaagtgtctactgcgtcactgttacggcctgtggttc
atatgcctgccagcctatgccagcgcatgccactccaaggtgcgggcactacgcatggcg
tacgacatcctcaggaagatgcaggacaagaagctgcaggcgcctgatgaggtgtgttac
cgggtgttaatgcagctgtgtggacagtacagccagcctgtcctggcggtcagaatcctg
tttgagatgaagaaggctggagtccatcccaacgccatcacctatggttactacaacaag
gcggtgttggagagcacgtggccgtccaataccagaggaggctacttcctgtgggccaag
ctgaggaatgtggtcctgggagtgggacgattcaaacagctgggacggaaacagatggtg
cagaaccaaacccagagcagagacacacagctatcagactacagtgatctggacacagtc
agtcatggtagtgaagacagtactaacgactcagttgagcgggtctcaatcgatacagac
ttcactaagatggactccagcgatgatggatcaagcacaggtggccaatcagaccaaggc
tatgactctctatccaaggaggaagagaggatgatgggaagggacagcgacagaacacca
ctagcgcaggagaagtcagagagggagtcttgtcctctgagaagacaggaccacattacc
acacccggtgactccaacagaccaaagaaccgaagactgaggcccaattccctggatctg
accggaggacagaggactctcaggaccatcacacttaacttcacctccaacaccatgcag
gtccggggccctgctccaaaacggccgccgcctccgaactgcaaacctgggaaagctgaa
gccagtcaggctgatcctacccagaaccaggagagattggatggaggagagagggaggag
atagaaggtagtaagaacagacatacacctgccatggaggtgggaaggaggattgtgagc
tgcagtggtggagacactgaaaggcctgcaacctgcagtgttagtggagatgggaccgag
gctgcagattgcagtgttagtggagatgggaccgaggctgcagattacagtgttagtgga
gatgggaccgaggctgcagattacagtgttagtggagatgggaccgaggctgcagattgc
agtgttagtggagatgggaccgaggctgcagattgcagtgttagtggagatgggaccgag
gcttcagattgcagtgtctccaaacagagcagtgtaaaaaacagcggtgaaaccgtggac
agagccatcaagaggacaggtatcgttgagactggctttgaccctctgtccattatagca
gctgagactgagacggacacagagacggagggtgatgtggacagtagcagtacccacgca
gcccgccgagacctggcagaagagatagagatgtacatgaaggttctgagccctctgagc
agcaggacggccagcatggaccttcagaacccatccagcccgttactccacgccacctcc
accccatctaaacactcatcccatcgacctcggcccctcagcctgacctactccccatgt
acctcccctcgaccccttcctcccttgcttcgtgccaactcacaactccccctctccagg
cccaaagaacgtctccgtccctcctcgttggtctccccctcctcccctactccttcctca
actttctccatggactccctcctcacaccaactcttagtctggacatgtttaagagcagc
ttcctgtcggcagggaaaggggtggctgagaaggctagcaggctctactctcgcctgtca
tcacagacatcactctcacaggatgtgaactgtgaccagatcagcgtgtcatcaatgacc
tcagtggacccagaatgcacctctctgttggaagaaggctctgtcctggaccctgaaggt
ttcacctcctcctacgcctccccccagcacgacagcgtcacgtgcctgaggaggagccca
gccaggggacgcctcgtctctcagagccccacctcgccctgcaaggtgttccgccacaac
tccttctctagtggtttggctcctccctctagaggtccccagactccagactcctctcct
gatgcctcccgcttccacctccgtcaccactacactaccgaggtgttgatgtgcagctgc
agtcgctgtaagacatgtgactgcctggtgtatgatgaagagatcatggcaggatggacg
gccgaggactccaacctcaacaccacctgt
DBGET
integrated database retrieval system
