Salmo salar (Atlantic salmon): 106584953
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Entry
106584953 CDS
T04363
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04517
IgSF CAM signaling
sasa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106584953
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106584953
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
106584953
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
106584953
Intermediate filaments
Intermediate filament-binding proteins
106584953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
106584953
NCBI-ProteinID:
XP_014026116
UniProt:
A0A1S3PES9
LinkDB
All DBs
Position
ssa02:complement(37276953..37412517)
Genome browser
AA seq
2350 aa
AA seq
DB search
MTTVAVEYEHMEITQQYSSSDMVNNRWDDEWDNENSSARLFERSRIKALADEREAVQKKT
FTKWVNSHLSRVSCRITDLYRDLSDGRMLIKLLEVLSAERLPKPTRGRMRIHCLENVDKA
LQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETDGDNKEKRSAKDA
LLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHHNLQNAF
NLAEQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAI
ETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLNGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKTWERLEKAEHERELALRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVDAATKKHEAIETDITAYEERV
QAVVSVAKELEAEKYHDIKRIAARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEML
YIMDWMDEMKMMLLSQDYGKHLLGVEDLLQKHALVEADIGIQADRVKAVNNNAQKFAIDG
DVYKPCDPQVIRDRVAHMEFCYQELTQLAAERRAHLEESRRLWKFFWEMAEEEGWIREKE
QILSSDESGKDLTGTVRLLSQHRALEDEMNGRAGHLQHTITEGQAMADGGHFGAAKIREC
ITDLRAQWAALEELAAVRKAHLEEACALHQFQADADDADAWTLDALRIVSSGEVGHDEFS
TQALVRKHKDAAAEVASYRLVIDALYEQAGALPEEQVQSEEVKGRLAGIEERYKEVAELT
RLRKQALQDALALYKMFSEADACEVWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEM
NNQASRVAVVNQIARQLMHNGHPSEKNIKAQQDKLNNRWSQFRDLSDQKKESLISALGVQ
NYHLDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLVAIEDKLGDLRCE
AERLAGEHPDQAKAIKGRLAEITAVWEEMKATLRNREESLGEASKLQQFLRELDDFQSWL
SRTQTAIASEETPNTLAEAEKLLAQHEGIKNEIRNYEKDYQKMRDMGEMVTRGQTDAQYM
FLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYMLAHTEMP
TTLEGAEGAIKQQEDFMTTMDANEEKINGVVEAGRRLASDGNINADRIQERATSIDDRHK
KNREAALGLLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQA
FMAELQSNKEWLDTIEKDGMQLVLEKPETESVVKEKLSALQKMWEVLESTTQTKAQCLFD
ANKAELFTQSCADLDKWLGGLEGQIQSDDYGKDLTSVNILLKKQQILENQVEVRQREVVD
LQSQALVLSQEGKDTEEVDCQRQMVEHKFKELLDPLRKRKNFLVASREIHQFNRDVEDEI
LWVEERMPIATSTEHGLNLQTVQLLIKKNQTLQKEIQGHQPRFDDIFERSESLLMEDSLA
VEAIRQHLADLQQLWGLMIEETEKRHTRLEEAHNAQKYYFDAAEAEAWMSEQELYMMSEE
KAKDEQSSVAMLKKHQIVEQSVEDYAETVHQLSKTSRGLTAAGHPESERIGMRQSQVDKL
YAGMKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDAVNRLSDELINAGHADAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASYELHKFYHDAKEILGRILDKHKKLPEEVGRDQNTVETLQRMHTTFEHDIQALGTQ
VRQLQEDAVRLQSAYAGDKADDIQRRESEVLEALNTLLEACDIRRVHLLDTGDKFRFFSM
VRDLMLWMEDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLT
RKHYASEEIKDKLLQLMDKRKDMIDKWEDRREWLRLILEVHQFGRDAGVAEAWLLGQEPY
LFGWELGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEEKMRK
NPSPEPLPAQDSPLQSGVENGLQNGLPSDQDSPQNGVDRVEIMNGVVEQNSKDLSPIPSP
TASRRGKGSLSSTLLTQNHDSPVAQLEGFLHRKHEWEGHNKKASSRSWHNVYCVINNQEM
GFYKDNKGAGQGIPYHNAIPISLMGAVCDVAMDYKKKKHVFKLRVADGNEYLFQAKEEEE
MSTWIQAILNAGTPDKVSITPSNQSTPASSRAQTLPATVTLTTESSPGKREKDKEKDKEK
RFSLFGKKKL
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtagccgtggaatatgaacacatggagatcacgcagcagtacagtagcagc
gacatggtcaacaaccgctgggatgacgagtgggataacgagaacagctcggctcgcctg
ttcgagcgctcgcgcatcaaggccctggcagatgagcgcgaagcggtgcagaagaagacc
ttcaccaaatgggtgaactctcacctctcccgggtgtcctgccgcatcacggacctgtac
agggacctgagtgatggacgcatgctcatcaaactgctggaggtgctgtctgcggagaga
ctgcccaagcccaccaggggacggatgcgtatccactgcctggagaatgtggacaaggcc
ctgcagttcctcaaggagcagagggtccacctggaaaacatgggctcacatgacattgtt
gacggcaaccaccgcctcaccctgggcctcatctggaccatcattctcaggttccagatc
caggacattagtgttgagactgatggagacaacaaggagaagagatcagccaaggacgcc
ctgctcctctggtgccagatgaagactgctggctatccaaacgtgaacattcacaacttc
agcaccagttggcgagatggcatggcattcaatgccctcatccataagcacaggccagac
ctgattgactttgacaagctgaaaaagtccaatgcccaccacaacctgcagaatgccttc
aatttggctgagcagcatctggggcttaccaagctcctggacccagaggatatcagtgtg
gaccaccctgatgagaagtctgtcatcacatacgtggtgacatactaccactacttctcc
aaaatgaaggccctgaaagtggaggggaaacgtattggaaaggtactggacaatgccatt
gagacagagaagatgattgagaagtacgagtctctggcctcagacctgctggagtggatt
gagcagaccatcatcatcctcaacaatcgcaagtttgccaactctttaaacggggtgcag
cagcagcttcaagccttcaacacatatcgcacggtcgagaaaccccctaagtttactgag
aagggcaacctggaggtgcttctgtttaccatccagagcaagatgagggccaacaatcag
aaagtctacatgcccagggagggcaaactcatctctgacattaacaagacctgggagaga
ctggagaaggcagagcatgagcgggagctggctctgaggacagagctgattcgacaggag
aaactggagcagctggctcgccgctttgaccgcaaggctgccatgagggagacctggctg
agtgagaaccagcgcctcgtctcacaggacaactttggcttcgaccttccagcggtggac
gcggccaccaagaagcatgaggctatcgagacggatattacggcttacgaggagcgtgtg
caggccgtggtgtccgtcgctaaggagctggaggcagagaaataccacgacatcaaacga
atcgcagcacgcaaggacaatgtgatccggctgtgggagtacctgctggagcttctgaag
gcgaggcgccagcgcctggagatgaacttgggtctgcagagggtcttccaggagatgctt
tacatcatggactggatggacgagatgaagatgatgctactgtcccaggactatgggaag
catctgctcggagtggaggatctcttgcagaaacatgccctggtggaggccgacatcggc
atccaggccgaccgagtcaaagctgtcaacaacaatgctcagaagttcgccatcgacggc
gatgtttacaagccctgtgaccctcaggtaatacgtgaccgtgtggcacacatggagttc
tgttaccaggaactgacccagctggctgccgagcgacgggcccacctggaggagtcccgc
cgcctctggaagttcttctgggagatggccgaggaggagggctggatacgagagaaggag
cagatcctgtcgtcggacgagagcggcaaggacctgacgggcactgtgcgcctgctgagc
cagcaccgcgccctggaggatgagatgaatggccgtgcaggtcacctgcagcacaccatc
actgaaggccaggccatggccgacggcggccacttcggcgctgccaaaatccgtgaatgc
atcaccgacctgcgggcgcagtgggcagcgttggaggagctggcggccgtgaggaaggcc
catctggaggaagcgtgtgccctgcaccagttccaggcggacgcagatgatgccgacgcc
tggaccctggatgccctgcgcattgtgtccagcggcgaggtgggccatgacgagttctcc
acacaggccctggtgcgcaaacacaaggacgccgccgccgaggtggccagctatcggctg
gtgatcgatgctctctatgagcaggcgggcgccttgcctgaggagcaggtccagtcggaa
gaggtcaagggccgcctggcaggcatagaggagcgctacaaggaggtggccgagctgacc
cggttgagaaagcaggcactgcaggacgccctggccctctacaagatgttcagcgaggcg
gacgcctgcgaggtgtggatcgatgagaaggagcagtggctcaacagtatggagatccca
gagaagctggaagacctagaggtcattcagcacaggttcgagagcctggagcctgagatg
aacaaccaggcgtcacgagtcgctgttgtgaaccagattgccaggcagctgatgcacaat
ggacaccccagtgagaagaacatcaaagcccagcaagataagctcaacaacagatggagc
cagttccgggatctgtcggaccagaagaaggagtctctaatctcggcgctgggtgtgcag
aactaccacctggactgcaacgaaaccaagtcatggatccgcgagaagacgaaggtcatc
gagtccacccaggagctgggcaacgacctgacgggtgtcatggcgctgcagcgtaaactc
actggcatggagcgtgacctggttgccatcgaggacaagctgggcgacctgcgctgcgag
gcagagcggctggccggcgagcacccagaccaggccaaggccatcaagggccgcctggcc
gagatcactgccgtgtgggaggagatgaaggccacactgcgtaatcgtgaggagtccctt
ggtgaggccagcaagctgcagcagttcctgcgcgagctggatgacttccagtcgtggctg
tcacgcacacagacagccatcgcctcagaggagacgcccaacacgctggccgaggcagag
aagttgttagcgcagcacgagggcatcaagaacgagatccgcaactacgagaaggactac
cagaagatgcgcgacatgggcgagatggtgacccggggccagaccgatgcccagtacatg
ttcctgaggcagaggctacaggccctggacactggctggaatgagctgcacaagatgtgg
gagaaccggcagaacctcctgtcccagtcccatgcctaccagctgtttctcagggacacc
aagcaggccgaggccttcctcaacaaccaggagtacatgctggcccatacagagatgccc
actacgcttgagggggccgaaggagccatcaagcagcaggaggacttcatgaccaccatg
gacgccaacgaagagaagataaatggtgtggtggaggctggcaggcgtctggcgagtgat
ggcaacatcaatgccgatcgcatccaggagagagcgacgtctattgacgacaggcataag
aagaaccgcgaggctgctctgggcttactgatgaggctgaaggataaccgggaccttcag
aagttcctacaggattgccaggagctgtccctgtggatcaatgagaagatgctcacggcc
caggacatgtcgtacgatgaggccaggaacctccacagcaaatggctcaagcatcaggcc
ttcatggccgagctgcagtccaacaaggagtggctggacacaattgagaaggatgggatg
cagctggtgttggagaagcctgagacagagtcggtggtcaaggagaagctctcagccctc
cagaagatgtgggaagtgttggagtccaccactcagaccaaagcccagtgcctgtttgac
gccaacaaggccgagctgttcacacagagctgtgctgacttggacaagtggctgggtggc
ctggagggccagattcaatcagacgactatggcaaagacctgaccagcgtcaacatcctg
ctcaaaaagcagcagatattggagaaccaggtggaggtccgtcagagggaggtggtggat
ctgcagagccaggcactggtcctcagccaggaagggaaggacacagaggaggtggattgc
cagagacagatggtggagcacaagttcaaagagctgctcgacccgctgaggaagagaaaa
aacttcctggtagcctcccgtgagatccaccagttcaaccgtgacgtggaggacgagata
ctttgggtcgaagagaggatgccaattgcaacctccacagagcatggtctcaacctacag
accgttcaactgcttatcaagaaaaatcagaccttgcagaaggagatccagggacaccag
ccccgcttcgacgacatttttgagcggagcgagagcctgctgatggaggacagccttgcc
gtggaggccatccgccagcacctggccgacctgcaacagctgtggggtctgatgattgag
gagacagagaagcgtcacacccgactggaggaggcccacaacgcccagaagtactacttt
gatgccgccgaggctgaggcctggatgagcgagcaggagttgtacatgatgtctgaggag
aaggccaaggatgagcagagctctgtagccatgctgaagaagcaccagattgtggaacag
tcggtggaggactacgctgagacagtccatcagctctccaagaccagcagaggcctgaca
gctgcaggacatccagagagtgagaggataggcatgcgtcagtctcaagtggacaagctc
tatgccggcatgaaggacctgtctgaggagaggcggggaaaactggatgagaggttccgc
ctgttccagctcaaccgcgaggttgacgacttggagcagtggattgccgagcgggaggtg
gtggccggatctcacgagctgggacaggactacgagcatgtcactatgctccaggagcgc
ttccgggagtttgcccgtgacacaggcaacatcggccaggagcgtgtggatgccgtcaac
cgcctgtccgacgagctgattaatgcgggccatgcagatgccgccacggtggctgagtgg
aaggacggcctcaacgaggcctgggctgacctgctggagctcatcgacacgcgcacgcag
atcctggccgcctcctatgagctacacaagttctaccacgacgccaaggagatcctgggc
cgcatcctggacaaacacaagaagcttcccgaggaggtgggtcgtgaccagaacacggtg
gagacactgcagcggatgcacaccaccttcgagcacgacatccaggccctgggaacacag
gtgaggcagctgcaggaggatgccgtccgcctccagtcggcctacgctggcgacaaggca
gacgacatccagcggagggagagtgaggtgctggaggccttgaataccctgctggaggcc
tgcgatatccgaagagtccacctcctggacacaggcgacaaattccgcttcttcagcatg
gtgcgcgacctcatgctgtggatggaggacgtcatccgtctcattgaggcccaggagaat
ccaagggacgtgtcctctgtggagttgttgatgaacaaccaccagggtatcaaggctgag
atcgacgctcgcaatgacagcttcaccgcttgcattgagttgggcaagtctctgctaacc
agaaagcactatgcatcagaagagatcaaagataaattactacagctgatggacaagagg
aaagacatgattgacaagtgggaggaccgacgggagtggttaagactgattttggaggtt
caccagtttgggagagatgcaggggtggcagaggcgtggctgctgggacaggaaccatac
ctgttcggctgggagttggggcagagcgtggacgaggtggagaaactgatcaagaggcac
gaggcattcgagaagtcggccgctacttgggaggagcgcttctcagcgctggagaggttg
actacgttggagttattggaagtgagaagacagcaagaggaagaggagaaaatgcgaaaa
aacccttcaccggagcctttaccggcgcaggactcaccactgcagagtggagtagagaac
ggactgcagaatggactgccctcagaccaggattctccacagaatggcgtggacagagtt
gagatcatgaatggagtggtggagcagaactcaaaggacctgagccccattccctcaccc
acagccagccggcggggcaagggcagcctgtcctccacgttgctgacccagaaccacgat
tcgcctgtggctcagctggagggcttcctgcatcgcaagcatgaatgggagggacacaac
aagaaggcctcaagcagatcctggcataacgtgtactgcgttatcaacaatcaggaaatg
ggcttctacaaagacaacaagggtgctggtcaaggcatcccctaccacaatgcgattccg
atcagtctaatgggggctgtgtgtgatgtggccatggactacaaaaaaaagaagcatgtc
ttcaaactcagagttgctgatggaaatgagtatctcttccaagccaaagaagaagaggag
atgagcacatggatccaggccattctgaatgcggggacacctgacaaggtatcgattacg
cccagcaaccagagcactccagcgtcgagccgagcccagaccctgcccgccaccgtcacc
ctcaccaccgaatccagcccgggcaagcgggagaaagacaaggaaaaggacaaggaaaag
cgattcagcctctttggcaagaaaaaactataa
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integrated database retrieval system
