Salmo salar (Atlantic salmon): 106585010
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Entry
106585010 CDS
T04363
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03013
Nucleocytoplasmic transport
sasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106585010
09122 Translation
03013 Nucleocytoplasmic transport
106585010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106585010
03041 Spliceosome [BR:
sasa03041
]
106585010
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106585010
Spliceosome [BR:
sasa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106585010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
106585010
NCBI-ProteinID:
XP_014026216
UniProt:
A0A1S3PF24
LinkDB
All DBs
Position
ssa24:complement(15292412..15313994)
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AA seq
683 aa
AA seq
DB search
MSDALKKRKSKVLRSETGTPEGKCGREEGDQDIRVYSEEVELDGRDPEEDYQQYKLTCEA
LAKLMNDIQELKANGAKDGCAEVEEKRMQSCVHFMSLKKLNRLAHMRLKRGRDQTHEGKQ
RVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIDLVSVDEFYKEAPPEISRTPLTKD
DPHQLTLARLDWELEQRKRLAEQYKESLSSKEKIQKGIEVKKEHLSSLQPGLNAIMQASL
PVQEYLSMPFEQTQRQTEIARHLPPSLYVLLVQASAYGQACDKSLSVSISGDVDEAKALS
KPPEDSQDDDSGDSDAEEEQEKTKRRRPTTGGQLDDKRREMLKRHPLSLCLDLKCKDGSV
LHLFNYYLMNLNIMTVKAKVSTATDLTGAISAGELLNSDTLLNCLYANDQGRETPNPANR
YQFDKVGISSFGDYVAELGHPYLWVQSLGGLQFPSEAPEGLRAGSSLSASHMESTMKLLR
GRVQSRLALHKQFSSLEHSIVPVSTECQHLFPAKVLSRLARWTTMSHQEYTNLSFTQHVS
DAGLARETDLFFMAVVERGTARLQAAVVLNPRYPEISPLFALSLSWKGECSGRTDDNLRA
MESEVNVFKSELQGPRPGHQLLTNQVARLCVCLDVYLETDGQDDSVEGPREFLREKMCLR
TVRGPNRLKPFKYNHPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgccctgaagaagcgcaagtcgaaagtgctccgcagcgagacgggcacaccg
gaggggaaatgcggccgcgaagagggagaccaggacatacgtgtgtacagtgaggaggtg
gagctggatggcagggaccctgaagaggactaccagcagtataaactgacctgtgaagct
ctggccaaactgatgaacgacatacaggagctgaaagccaacggagccaaggatgggtgt
gctgaggtagaggagaagaggatgcagagctgtgtccactttatgagcctgaagaaactc
aaccgcctggctcacatgagactgaagagggggagagaccagacacacgagggcaagcag
agagtggatgtgttgcacctgcagctccagaacctgctctatgaggtcatgcacctgcag
aaggagatcagcaagtgtctggagttcaagtctaaacatgaggagatagatctggtgagt
gtagatgagttctacaaggaggccccccctgagatctcccgcaccccactcaccaaggac
gacccccaccaactcacactggccaggttggactgggaactggagcagaggaagaggctg
gctgagcagtacaaggagtctctgtccagtaaggagaagatccagaaaggcattgaggtg
aagaaggaacacctgagttctctacagcctggactcaacgctatcatgcaggcatccctc
ccggtccaggagtacctctcaatgccgtttgaacagacccagagacagacagagatcgcc
cgccaccttcccccctctctctacgtcctcctggtacaggccagtgcttacggacaggcc
tgcgataagagcctgagtgtgtccatcagtggagacgtggacgaggccaaagctctgtct
aaacctccagaggactcccaggatgatgattctggtgattctgatgcagaggaggagcag
gagaagacgaagaggaggcgacctactacaggtggtcagctggatgataagagacgtgag
atgctgaagagacaccctctctccctttgcctggacctcaaatgcaaagacggcagtgtg
ctgcatctgttcaactactacctgatgaacctgaacatcatgactgtcaaggccaaagtc
tccaccgccacagacctcactggagccatcagcgcaggggagctgttaaattctgacacg
ctgctcaactgcctgtatgccaatgaccagggccgcgagacccccaaccctgctaaccgc
taccagtttgataaagtggggattagttcgtttggagactacgtggcagagttgggtcat
ccctacctgtgggtgcagagtctaggaggactgcagttccccagtgaagccccagagggt
ttgcgtgcaggcagttctcttagtgccagtcacatggagagcaccatgaagctgctgaga
ggacgagtccagtcacgtctggccctgcacaaacagttctcctcactagaacacagtatc
gttccagtgtccacggagtgccagcacctgttccctgctaaggttctctcccgcctggct
cgctggacaaccatgtcacatcaggagtacacaaatctgtcgttcacgcagcatgtgtca
gacgcaggtctggctcgggaaactgacctgttcttcatggctgtggtggagagaggaaca
gctcgtcttcaggctgcagtggtgttgaacccccgttatccagaaatctctcctctgttt
gctctttcactcagctggaagggcgagtgcagcggacgtaccgatgacaaccttagagcc
atggagagtgaggtgaatgtgtttaagtcggagctccaggggccccgcccagggcaccag
ctgctaaccaatcaggtggctcgtctgtgtgtctgtctggacgtatacctggagaccgac
ggacaggatgacagcgtggagggaccacgggagtttctccgagagaagatgtgtctacgc
accgtaaggggtccgaaccgtctgaagccgttcaagtacaaccacccccagggcttcttc
agtcaccgctga
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integrated database retrieval system
