Salmo salar (Atlantic salmon): 106585059
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Entry
106585059 CDS
T04363
Name
(RefSeq) clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04142
Lysosome
sasa04144
Endocytosis
sasa05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106585059
04142 Lysosome
106585059
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
106585059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106585059
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106585059
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
106585059
Exosome [BR:
sasa04147
]
Exosomal proteins
Proteins found in most exosomes
106585059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
IFS
Gp18_dom_I
capSnatchArena
Motif
Other DBs
NCBI-GeneID:
106585059
NCBI-ProteinID:
XP_014026294
UniProt:
A0A1S3PFW9
LinkDB
All DBs
Position
ssa24:complement(13782192..13819237)
Genome browser
AA seq
1683 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGVNPANIGFSYLTMESDKFICIREKVGEQNQVVIIDMADPNN
PSRRPISADSAIMNPASKVIALKAAKCLQIFNIEMKSKMKAHTMTEEVMFWKWISVNTVA
LVTEAAVYHWSMEGDSQPIKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFGEFKVEGNTKASTLFCFAVRSQAGGKLHIIEVGQPATGN
QPFTKKAVDVFFPPEAQTDFPVAMQIGTKHGVIYLITKYGYIHLYDLESGVCIYMNRISA
ETIFVTAPHELTSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLGLRMAVRSNLAGA
EELFARKFNTLFAQGSYSEAAKVAASTPKGILRTAETIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECCEELGDLVKAVDPTLALSVYL
RANVPSKVIQCFAETGQFQKIVLYAKKVGYSPDWVFLLRNVMRVSPDQGLQFSQMLVADE
EPLANINQIVDVFMEGSLIQQCTSFLLDALKNNQPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFSHYDRAHIAQLCEKAGLLQRALEHYTDLFDIKRAVVHTHLLNPEWLVNFFGALSV
EDSIECLRAMLSANIRQNLQLCVQVASKYHEQLGTNTLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPDRVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNTLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNTPERFLKENTFY
DSAVVGKYCEKRDPHLACVAYERGQCDLDLIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPYRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSIFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AIQVLIEQISNLDRAYEFAERCNEAAVWSQLARAQLQRDLVKEAIDSYIKADDPSAYMEV
VSAASKNNNWEDLVKFLQMARKKARESYVETELIFALAKTGRLAELEEFVSGPNNAHIQQ
VGDRCYEEGMYDAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCCAC
VDGEEFRLAQICGLHIVIHADELEELISYYQDRGYYEELIGLLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQSHLWAELVFLYDKYEEYDNAVLTMMS
HPTDAWKEVQFKDIIAKVANVELYYKSLSFYLDNKPLLTNDLLTILSPRLDHSRTVSYFT
KVNQLKLVKPYLRSVQSHNNKGVNEALNNLLTEEEDYQGLRASIDAYDNFDTIGLAQRLE
KHELIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDAMLYAAESKDAELAETLLQWFLEE
GRKECFAACLFASYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDEVEEKVTVD
KLEESESQRKTEEEVTEPTPIVFGQQLMLTAGSAPVAPQPGYSGGYGYAAPGYSPQPPYN
YNM
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatactgccgatacgatttcaggaacatctgcagctgcagaacctgggggtg
aacccggctaacattggtttcagctacctgaccatggagtctgacaagttcatctgcatc
cgggagaaggtgggcgagcagaaccaggtggtgatcatagacatggccgaccccaataac
cccagcagacgtcccatctctgctgacagtgccatcatgaaccctgccagcaaggtcatc
gccctcaaagctgctaagtgcctgcagatcttcaacattgagatgaagagtaagatgaag
gctcacaccatgaccgaggaagtcatgttctggaagtggatctctgtcaacaccgtcgcc
ttggtgactgaagcggccgtctaccattggagcatggagggggactcgcagcccatcaaa
gtgtttgatcggcacgctagtctggccggatgccagatcataaactacagaacagacgaa
cagcagaagtggctcctccttatagggatctcggcacagcaaaaccgcgtggtgggggcc
atgcagctgtactctgtggacaggaaggtgtcccagcccatcgaaggccacgctgcagcc
ttcggagagtttaaggtggagggcaacacgaaagcctccactctgttctgcttcgctgtg
cgcagccaggctgggggcaagctgcacatcatagaggtgggtcagccggctacagggaac
cagccgtttactaagaaggcggttgacgtgttcttccctcctgaggctcagacagacttc
cccgtcgccatgcagattggcaccaagcacggtgtgatctacctgatcactaagtatggc
tacatccacctgtatgacctggagtcaggagtgtgtatctacatgaaccgcatcagcgcc
gagaccatcttcgtcaccgccccccacgaactcacctccggcatcatcggggttaacaag
aagggacaggtgttgtcagtgtgtgtggaggaggaaaacatagtgaactatgccaccaac
gtgctgcagaacccagacctgggcctgaggatggccgtgcgttctaacctggccggggct
gaggagctgtttgccaggaagttcaacacactgttcgcccagggctcctactccgaggct
gccaaggtggccgcatccacacccaagggtatcctgcgcacagcggagaccatccgtaag
ttccagagcgtgccagcccagccgggccaggcctctcccctgctgcagtactttggcatc
ctgctggaccagggccagctcaacaagtttgagtctctggagctgtgcaggcccgtgcta
cagcaaggacgcaagcagctgttggagaagtggctgaaagaggacaagctggagtgttgt
gaggagcttggtgacctggttaaggcagtagatcctacgctagccctcagtgtctacctc
agggccaacgtacccagcaaggtgatccagtgctttgctgagaccggacagttccagaag
atagtgctctacgccaaaaaggtgggctactctccagactgggtgtttctgttgaggaat
gtgatgcgggtcagcccagaccagggtctacagttctctcagatgctggtggcagatgag
gagcccctggccaacatcaaccagatagtggatgtattcatggagggaagtctgatccag
cagtgtacctccttcctattggacgctctgaagaacaaccagccagccgagggacaccta
cagacacgcctactggagatgaacctcatccacgccccccaggtcgccgacgcgatcctt
ggcaaccagatgtttagtcactatgaccgtgcccacatcgcccagctgtgtgagaaggct
ggactgctacagagggctctagagcactacactgacctgtttgacatcaaacgggctgtc
gtacacacacacctgctcaaccctgagtggctggtgaacttctttggcgccctgtcagta
gaggactcaatagagtgtcttcgggccatgttatcagccaacatcagacagaaccttcag
ctgtgtgtccaggtggcatctaaataccatgagcagctgggaacaaacaccctggtggag
ctctttgagtccttcaagagctacgagggtctgttctacttcctgggctccatagtgaac
ttcagccaggaccctgacgtccattttaaatacatccaggcggcctgtaagacagggcag
atcaaggaagtggagcgcatctgtagagagagcaactgttacgacccggacagggtcaag
aacttcctcaaggaggctaaattgacagaccagctgccgttgatcatagtgtgtgaccgc
tttgactttgtccatgacctggtgctctatctctaccgcaacacactgcagaagtacata
gagatctacgttcagaaggtgaaccccagccgtctgcctgtggtgataggaggtctgttg
gatgtagactgtgctgaagacgtcattaagaacctgatcatggtggtgagaggacagttc
tccactgatgagctggtggcagaggtggagaagaggaacagactgaagctgttgttgccg
tggcttgagtctcgtatccacgagggctgtgaagagccggctacccacaatgccttggct
aagatctacattgacagtaacaacaccccggagcgcttcttgaaggagaacaccttctac
gacagcgctgtagtggggaagtattgtgagaagagagacccccacctagcctgtgtcgcc
tatgagaggggccagtgtgacctggaccttatcaaggtgtgcaatgagaactccctgttc
aagagtgaggctcgctacctggtccgacggaaagacccagaactatgggccaacgttcta
gaggagaacaacccttatagacgccaactcatagaccaggtggtgcagaccgctctgtca
gagacccaggacccagaggaggtgtctgtgacggtcaaggccttcatgacagctgacctg
cccaatgagctcatcgaactactggagaagatcgtactggacaactctatcttcagcgag
catcgaaacctccagaacctgttgatcctgacggccatcaaggcagaccggacgcgtgtg
atggagtacatcaaccgcctggacaactacgacgcccctgacatcgctaacatcgccatc
agcaacgagctcttcgaggaggccttcgccatcttcaagaagtttgacgtcaacacctcc
gccattcaggtcctgatcgagcaaatcagtaacctggacagagcctatgagtttgcagag
cgttgtaatgaggccgcggtatggagtcaactggccagagcccagctccagagagacctg
gttaaagaggccatcgattcctacatcaaagctgacgacccgtcagcctacatggaggtg
gtcagcgctgccagcaagaacaataactgggaggacctggtgaagttccttcagatggct
cgtaagaaggccagagagtcgtacgtagagacagagctcatctttgctctggctaaaact
ggcagactggccgaactagaggaatttgtcagcggccctaacaacgcccatatacaacag
gtgggagataggtgttatgaagaagggatgtacgatgctgccaagctgctgtacaataac
gtgtccaactttgcccgcctggcatccacgctggtacacctaggagagtaccaagctgct
gtggacagcgccaggaaagccaacagcacacgcacctggaaggaggtgtgttgtgcgtgt
gtggatggggaagagtttcgattggctcagatctgtggtctacacattgttatccacgct
gatgaactggaggagctcatcagctactaccaggaccggggttactacgaggagctgata
ggcctgttggaggccgcgttaggtttggagcgcgctcacatgggcatgttcacagagctg
gccatcctctactccaaattcaaaccccagaagatgagagaacacctggaactcttctgg
tcccgcgtcaacatccctaaggtgctgcgagctgcggagcagtcccatctgtgggcggag
ttagtgtttctgtatgataaatacgaggaatatgacaacgctgtcctcacgatgatgtca
caccctacggacgcatggaaggaggtgcagttcaaggacatcattgccaaggtggccaat
gtggagctgtactacaaatccctttccttttacctggacaacaaacctctgctgacgaat
gaccttctgaccatactgtcaccacggttagaccacagccgcacggtcagctacttcacc
aaggtcaaccagttgaagttggtaaagccttacctgaggtcagttcagagtcacaacaac
aagggagtcaacgaggccctcaataacctgctgacagaggaggaggactaccagggtctg
agggcgtctatcgatgcgtatgataactttgacaccattggtttggcccagagactggag
aagcatgagctgattgagttcagacgcatcgcagcatacctctacaaaggcaacaaccgc
tggagacagagcgtggaactctgcaagaaggacaaattatacaaggatgcaatgctgtac
gctgctgagtctaaggatgctgagctggctgagaccctgctgcagtggttcctggaggag
ggcaggaaggagtgttttgctgcctgtctgtttgcctcctatgacctgttgcaccctgac
gtggtgctggagctggcctggagacacaacatcatggactttgccatgccatacttcatc
caagtcatgagggagtacctcaccaaggttgatgaggttgaggagaaggtgacggtggac
aaactggaggagtcagaaagccaaaggaagactgaggaagaagtcacagaacccaccccc
atagttttcggtcagcagctgatgttgacggcaggctctgctccagtggctccccagcct
ggatactcaggaggctacggatacgctgccccaggctactccccccagcccccctacaac
tacaacatgtag
DBGET
integrated database retrieval system
