Salmo salar (Atlantic salmon): 106585078
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Entry
106585078 CDS
T04363
Symbol
piwil2
Name
(RefSeq) piwi like RNA-mediated gene silencing 2
KO
K02156
aubergine
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106585078 (piwil2)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106585078 (piwil2)
piRNA pathway
106585078 (piwil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
Piwi_N
ArgoL1
Motif
Other DBs
NCBI-GeneID:
106585078
NCBI-ProteinID:
XP_014026336
UniProt:
A0A1S3PFF1
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Position
ssa24:12884111..12929411
Genome browser
AA seq
1054 aa
AA seq
DB search
MDPKKPSFPGLPGATRIPWLQQQAWGRGLRSDEPAIGRARGLMFAADGSAGLGRARGFTT
AGETLLMQYGRGVPFPVSDPSIGFARGIPMPTSEDGGISRARGWLLSTADPTVGVARGEP
LLGLGPHPGQATPGQLATQDLPEEMPSLQAEEEVVAKQVDMPTHSQGSLLVSMFRGMGID
PSKTWGRGGLPVGRGAFGAELQPQTAPVGAVAFTGLGGDRFPEDMMGQGNSFLGRGVPSQ
MVGMGRASMPPLGTGRGPTMPPTLPLSPPKEAHMTPGCSQTKGELKMEATCETLHKTGTK
GTPLPIGSNHITIHCRNEAVYQYHVTFTPNVESMGMRFGMMKDHRPTTGEVVAFDGSILY
LPVKMEEVVHLKSVRRTDNQEVDVKIQMTKILPPNSDLCIPFYNVVLRRVMKILGLKLVG
RNHYDPKSAVILGKQRLQVWPGYSTCIKHTDGGLYLQVDVSHKVLRNDSVLDCMNVIYQQ
SRESFQDECTKELIGSIVITRYNNRTYRIDDIEWGKSPKDTFTMADGSTTTFVEYYSKNY
GITIKEMDQPMLIHRPKERSKPGGKQVITGEILLLPELSFMTGIPDKMRKDFRAMKDLTM
HINVSSEQHTHSLKQLLKNINTNPEAQTELARWGLEISQDILVTIGRILPLETICLQSAS
FVTGADVSWSREVIRDASISCIPMNCWAIFYPRRCAEQAEELVSCFGKVAGPMGLRLDRP
IRVELKDDRTETYVKSIHSQLTSEPNVQLVVCIMTGNRDDLYSAIKKLCCVQSPVPSQAI
NVRTISQPQKLRSVAQKILLQMNCKLGGELWTVNVPLKHLMVIGVDVHHDTSKKSRSVMG
FVASLNSLLTRWYSRVTFQMPNEEIINGFRVCLLAALQKYYEVNHNFPEKIVVYRDGVSD
GQLKTVELYEIPQLLKCFETFPNYEPKLAFIVVQKRVSTNLYSCSGDRFGTPPPGTVLDH
TVTNREWVDFYLMAHHIRQGCGLPTHYISVYNTANLSPDHLQRLTFKMCHMYWNWPGTIR
VPAPCKYAHKLAFLSGQYLHSEPAIQLADKLYFL
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaagaagccttctttcccaggcctccctggtgcaacccgcattccttggctg
cagcagcaagcatggggtcgaggactgcggtcagatgaaccagcaataggacgagccaga
ggccttatgtttgcagcagatgggtctgctggcttaggacgagccaggggtttcaccacc
gctggtgaaacactgcttatgcagtacgggagaggagtgcccttcccagtgagcgatccc
tccattggctttgccagggggatacccatgccaacatcagaagatggtgggattagccgc
gctagagggtggcttctctcgacagctgatccgaccgtaggtgtggcaagaggggaaccc
cttcttggtttggggcctcatcctggacaagccactccaggtcagctcgcaacgcaagac
ttgccagaagagatgccaagtctgcaggcagaagaggaagtagtagccaaacaagtggac
atgcccacccacagccaggggtcgttgctggtgtccatgttcagaggcatggggatcgat
ccctcaaagacctggggcaggggagggctgccagtggggaggggtgcttttggagcagag
ctccaaccacagacagcccctgttggagcagtggcattcaccggcctgggtggagacaga
ttccctgaggacatgatgggccaaggtaacagcttccttggccgaggtgtaccatctcag
atggtgggaatgggacgagcatcgatgccccccttgggtactgggaggggacccactatg
ccccctactctccctctatccccacccaaagaggctcatatgactccaggttgctctcaa
actaagggagaacttaagatggaggccacctgtgaaacattgcacaagactggtaccaaa
ggaacaccattgcccataggctcaaaccacatcaccattcactgcaggaatgaggcagtc
tatcagtaccatgtcactttcactcctaatgtggagtcgatgggtatgcgatttggcatg
atgaaggaccatcgccccaccactggggaggttgttgcttttgacggctcaattctctac
ctccctgtgaagatggaagaggtggttcacctaaagagtgtgagacgaactgacaaccag
gaggtggacgtcaagatccagatgactaagatcctaccacccaactctgacctgtgcatc
cccttctacaacgtggtgctgagaagggtaatgaagatccttggactgaagcttgtgggg
cggaatcattacgatccaaaaagcgcagtcatacttgggaagcagcggttgcaggtgtgg
ccaggttactcaacgtgcataaagcacactgacggaggcctgtacctccaggtggatgtg
tcccacaaagtgctgcgaaatgactctgtcctcgactgcatgaacgtgatctaccagcaa
agcagggagagcttccaggatgagtgcaccaaagagctgatcggcagcattgtcatcacc
cgatacaacaaccgcacctaccgcatcgacgacattgagtggggcaagtcccccaaagac
accttcaccatggccgacggctccacgaccactttcgtcgagtactacagcaaaaactat
ggcatcaccataaaagagatggaccaacccatgcttatccatcgacccaaagagaggtcc
aagcctgggggaaagcaagtcataaccggcgagatcttgcttctgccagagctctccttt
atgactggaatccctgacaaaatgagaaaggacttccgtgccatgaaggacttgacgatg
cacatcaatgtgagtagtgagcagcacactcactccctgaagcagctcctgaagaacatc
aacaccaacccagaggcccagacagaactggcacgctgggggctggagatcagccaagac
atcctggtgactataggaagaattctgcccctggagaccatctgtctgcagtcagcatcc
tttgtcaccggagctgatgtcagctggtccagggaggttatcagggatgcttctatcagt
tgtatccccatgaactgctgggccattttctacccacggcgctgtgctgagcaggccgag
gagctagtgtcctgctttgggaaggtggccggacccatgggcctgaggctggatcggccc
atccgcgtggaactgaaggatgaccgcaccgagacttacgtcaagagcatccactcccag
ctcactagtgagcccaacgtgcagttggtagtgtgcatcatgacaggcaacagagacgac
ctctacagtgccatcaagaagctgtgctgcgtccagagtcccgtgccctctcaggccatt
aacgtccggaccatctcccaaccccaaaagctgaggagcgtagcccagaaaatcctgctg
cagatgaactgcaaactgggaggagagctgtggaccgtgaacgtccctctgaaacatctg
atggtgattggagtggacgtccatcacgacaccagcaagaagagcagatcagtcatgggc
ttcgtcgccagcctgaatagcctgctgactaggtggtactccagagtgaccttccagatg
cccaacgaggagatcatcaacgggttcagagtgtgtctgctggctgcactgcagaaatac
tatgaggtgaaccataacttcccggagaagattgtggtatatcgggacggagtgtctgac
ggccagctgaagacagtggagctgtatgagatccctcagctgctcaagtgttttgagacg
ttccctaactatgagcccaagctggccttcatcgtggtacagaaacgtgtcagcaccaac
ctgtactcctgctccggagaccgctttggaacgcctccgccaggaactgtcctggaccac
acagtcaccaacagggaatgggttgacttctacctgatggcgcatcacattcgacagggc
tgtggcctgcctacacactacatctcagtctacaacacagcaaacctctccccagaccac
ttgcaaaggctgaccttcaaaatgtgccacatgtactggaattggcccgggactatccga
gtgcctgcgccgtgcaagtatgcccacaaactggccttcctgtcgggccagtacctccac
tcagagccagctatccagctggcagacaagctgtacttcctctga
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integrated database retrieval system
