Salmo salar (Atlantic salmon): 106585114
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Entry
106585114 CDS
T04363
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1-like
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
106585114
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106585114
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
106585114
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans_2
Ion_trans
Motif
Other DBs
NCBI-GeneID:
106585114
NCBI-ProteinID:
XP_014026433
UniProt:
A0A1S3PFF5
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Position
ssa24:10326989..10343998
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AA seq
1100 aa
AA seq
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MVTASIYTYTTPPPFAPHIYWHTPMAMKIPHTFPPISHTHCLYRGHRLWWAFLLSSLSVF
LGGLLALLLWKVAHRGFNSIGIFRPRRQRWAHRQSISVQTDFNLRNALKEWAFSVISAQH
LPGKVLMVLIFCFNIGSILTYIILSTDPVESCMKEYSIAFLIDLSFNICHLLYFGLRFLA
AQDKLTVWVDLRSLVDFFTITPSIVTLFSRRAWLGLRFIRALHILELPVVLQILNVFNSN
STTLKLSRLVAILTGTLLTSAGFIHLLENSGDPWLDFSNPQPLYYFECVYFLVVTMSTVG
YGDVELRTTLGRLFVIIFIFIGLGLFANFVPEVVQIIINRKRFDGSFTGVSGKTHVVVCG
HITLSSASAFMKDFLHEDRGEVDVKVLFLGNFRPNQELEAFFLRWFLKVTFYQGSVMQRR
DLERVKMHKAGACLIICDRFTSDQHKEDAANLMRVISIKQYCPNTRIIVQMLKHNSKAFL
QNVPNWDWSRGDAVICLAELKLGFMSQSCLVPGLSTLLTNLFTMQSEIEQDGDTWQNLYR
EGLYNEIYTEHLSPSFIGMSFAQASKLCFLKLRLLLIGIEYQSGDQDFNVLVNPPSHIKI
KLWTLGFLIASNASDARRASMYCSVCHRDIKDLPRMRPCRCTEQKDVSSHTSAMSLGFRR
PSLGVLPFSPEGETLRERECVWEQQQQQEEQQEEVGLDSTGLFHWCPPVPLKDISLTRQS
ASTLALQDHVVVCVFGDGGSSLLGLGDFMMPLRASSLTAPELRTVVFLGDPHYFSREWPN
IQYFPNIYFLPGSPLCGADLRALKLERCAMVVVLSSLSSSIYIEPSMQDKETIHFCVNLY
HIRFSPEPGPLCTLSHTQSHGHGQGLELGHGFGGHNRGPSHDTLDFSHIPTIPEKAEVTP
AHSAGTTVPLLVELVNSSNVCFVNEADSQEDFSSLTLTQAFSVGSVFSVDLLDSLMAATY
FNANVPGLICTLVTGGDTPLLEAQLAEDNQLRGGEMSMKMWALRQRSKLAQLAVQDEPLC
SLACEDFKELFCQALDSLEILCFGLYRLLDPPNPSMKRFVITNPSAELPLLPSDRVFCSV
PFHQSHLLTLRRAKNISQHL
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggtgactgcctccatttacacctacaccaccccgcccccctttgccccgcacatttat
tggcacacccccatggccatgaagatcccccacactttccctcctatttcccacacccac
tgcctctatcgggggcacaggctgtggtgggccttcctcctctcctccctgtctgtcttc
ctgggggggctgctggccctgctgctctggaaggttgctcacagagggttcaatagcatt
gggattttcagaccccgacgacagcgctgggcacacagacagagcattagtgtgcagaca
gatttcaatctgaggaatgccttgaaggaatgggcgttctctgtgatatcggctcaacat
ctgcctggcaaagtcctaatggtgctgatattctgtttcaacattggctccatcctgacc
tatatcatcctctctactgacccagtagagtcctgcatgaaagaatacagcatagctttt
ctcattgatttgagcttcaacatctgccaccttctgtattttgggctcaggtttttggcg
gcccaggataagctgacggtttgggttgacttgagatccctggtggattttttcaccatt
actccttccattgttaccctgttttcccgtcgagcctggctgggtctgaggttcatcaga
gctctgcacatactggagttaccagtcgttctgcagattctcaacgtcttcaacagcaac
agcaccactctgaaactctcccgcctggttgccatcctaacaggcacgctgctgacctca
gctggtttcatccacctgctggaaaactcaggtgacccctggctggacttctccaacccc
caacctctctactactttgagtgtgtttacttcctggttgttaccatgtcaacggtgggc
tatggtgacgtggagttgaggacgaccctgggacgcctcttcgtcatcatcttcatcttt
attggactgggtctgtttgccaactttgtcccagaggtggttcagatcatcattaacagg
aagaggtttgatggaagcttcacgggtgtctcaggcaagacccatgtggtggtgtgtggt
cacatcactctgagcagcgcctctgcctttatgaaagattttctacatgaggacagggga
gaggtcgacgtcaaggtgctcttcctgggaaacttccgtcctaaccaggagctggaggcg
ttcttcctgaggtggttcctgaaggtcaccttctaccagggctcagtgatgcagaggaga
gacctggagagagtgaagatgcataaagcaggagcttgcctgatcatctgtgacaggttc
acctcagaccagcataaggaggacgctgccaatctcatgagggtgatctccatcaaacag
tattgtcccaacaccaggattatagttcagatgctgaagcacaacagtaaggcgttcctg
cagaacgtgcctaactgggactggagtcgaggtgatgcagtgatctgcctggcagagctc
aaactgggtttcatgtctcagagctgcctggtgcctggcctctccacgctgttgaccaac
ctgttcaccatgcagagtgagatcgagcaggatggagacacctggcagaacctgtacaga
gagggcctctacaatgagatctacacagagcacctgtccccctccttcatagggatgtcc
ttcgctcaggccagcaagctatgtttcctgaagctgaggttgctgttgattgggattgag
tatcagagcggagaccaagatttcaatgtgttggtgaatcctcccagtcacatcaaaata
aagctgtggactctgggtttcctcatagccagcaatgccagtgatgccagaagggcgagt
atgtactgctctgtgtgtcacagagacatcaaggatttgcccaggatgagaccctgcagg
tgcactgagcagaaagatgtctcatctcacacctccgccatgagtctaggcttcagacgt
ccatcactgggagttctgcccttcagcccagagggagagactcttcgagagagggagtgt
gtgtgggagcagcagcagcagcaggaggagcagcaggaggaggtggggctggactctaca
ggactgttccactggtgcccacctgttcccctgaaggacatctcactgaccagacagagt
gccagtaccctggcgctgcaggaccacgtggtggtgtgtgtctttggggacgggggctcc
agcctgctgggcctgggggacttcatgatgcctctgagggccagcagcctgacggcccca
gagctgaggacggtcgtgttcctgggagacccacactacttcagcagggagtggcccaac
atacaatacttccccaatatctacttcctgcctggctctcctctgtgtggggcagacctg
cgtgcgttgaagttggagcgctgtgccatggtggtggtcctcagctctctgtccagctcc
atctacattgagccctccatgcaggataaggagaccatccacttctgtgttaacctctac
cacatccgcttcagccccgagccaggcccactctgcacactcagtcacactcaaagtcac
ggccacggacaggggctggagcttggtcatgggtttggtggtcataaccgggggccgagc
cacgacacactagacttttcccacatccctacaatacccgagaaggctgaggtcacccct
gctcacagcgccggcaccactgtccctctgctggtagagctggtgaacagctctaacgtg
tgctttgtgaacgaggcggacagccaagaggacttctccagcctgaccctcacccaggcc
ttctctgtaggctccgtcttctctgtcgacctactggactctctcatggcagccacgtac
ttcaacgccaacgtgcctggtctgatctgtacgctggtgacgggtggcgacaccccctta
ctggaggcccagctggcagaggacaaccagctgcggggaggggagatgtccatgaagatg
tgggcgctgcgccaacgctccaaactggcacagctggcagtgcaggatgagcccctctgc
agcctcgcttgtgaggacttcaaggagttgttctgccaggctctggactcgttggagatc
ctgtgttttgggctgtatcgcctgctggaccctcctaacccctccatgaagaggtttgta
atcaccaacccgtcagcagagctcccgttgttgccttcagacagagtcttctgctccgta
cccttccaccagagtcacctgctcaccctgaggagagccaagaacatcagccaacaccta
tga
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