Salmo salar (Atlantic salmon): 106585115
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Entry
106585115 CDS
T04363
Name
(RefSeq) nucleolysin TIA-1 isoform p40-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106585115
03041 Spliceosome [BR:
sasa03041
]
106585115
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
106585115
Spliceosome [BR:
sasa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106585115
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
Flg_new_2
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
106585115
NCBI-ProteinID:
XP_014026435
UniProt:
A0A1S3PFN8
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Position
ssa24:10307476..10326181
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AA seq
391 aa
AA seq
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MMMMMDDEQPKTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYEH
RHAAASLAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDVKAAFG
PFGRISDARVVKDVATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWAARKPP
APKTTYETNTKHLSFDEVVNQSSPSNCTVYCGGVGTGLTEQLMRQTFSPFGQIMEIRVFP
DKGYSFVRFTSHEGAAHAIVSVNGTSIEGHMVKCYWGKETTDMMSPMQQVQQVPQNKVGF
AAQPYGQYAQWYGNAQQIGQYVPNGWQVPTYGVYGQAQAWNQQGFNHLPASAGWTGVSAL
SNGGVMEATQGLNGSMLANQAGMGATGYPTH
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgatggacgacgaacagcccaaaaccctgtatgtagggaacctgtccagg
gatgtcactgagcccctcatcctacaggttttcacacagatcggcccctgcaagagctgt
aaaatgattgttgatactgcaggcaatgacccatactgctttgtggagttctatgagcac
aggcatgctgccgcatcattggctgccatgaatggacgtaaaattatgggtaaggaggtt
aaagtcaactgggccacaacgccaagcagtcagaaaaaagacacaagcaatcatttccat
gtctttgtcggagacctcagccccgaaatcaccacagatgatgtaaaagcggcctttggt
ccatttgggaggatatcggatgctcgtgtagtcaaagatgtggcgacagggaagtctaaa
ggctatggctttgtctctttcttcaacaagtgggatgcagagaacgccattcagcagatg
ggtggtcaatggctaggcggcagacagatcaggaccaactgggccgctagaaagccccct
gctcctaaaaccacctatgaaacaaacacgaagcacctgtcctttgatgaggttgtgaac
cagtccagccccagtaactgcactgtgtactgtggaggagtcggcactggtctaacagaa
caattgatgagacagaccttctccccctttggacaaatcatggaaatccgtgtgttccca
gacaaaggatactcttttgtgcggtttacctctcacgagggagcagcccatgccattgtg
tctgtgaatgggacttcgatagagggccatatggtgaagtgttattggggtaaagagacc
acagacatgatgagtcctatgcagcaggtgcaacaagttccccagaacaaagtgggcttt
gcagcccagccctacggccagtatgcccagtggtacggcaatgcccagcagattggccag
tacgtccccaacgggtggcaggtacccacctatggggtttacggccaggcccaggcctgg
aaccagcagggttttaatcacttaccggccagtgctgggtggacaggtgtgagtgccctc
agtaacggtggggttatggaagctacgcagggattgaatgggagtatgttagcaaaccag
gccggtatgggagccactggataccccacacactga
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