Salmo salar (Atlantic salmon): 106585152 Help Entry 106585152         CDS       T04363                                  Symbol ptch1 Name (RefSeq) patched 1   KO K06225   patched 1 Organism sasa  Salmo salar (Atlantic salmon) Pathway sasa04340   Hedgehog signaling pathway Brite KEGG Orthology (KO) [BR:sasa00001]  09130 Environmental Information Processing   09132 Signal transduction    04340 Hedgehog signaling pathway     106585152 (ptch1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sterol-sensing Patched DcrB Motif Other DBs NCBI-GeneID:  106585152 NCBI-ProteinID:  XP_014026517 UniProt:  A0A1S3PFX8 LinkDB All DBs Position ssa24:complement(8002363..8086703) Genome browser AA seq 1544 aa AA seqDB search MASAANASSEQENRDPDRPRITRRNRGNYRTTAPDLEYLQRPSYCDAAFALEQISEGKAT GRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLRAANLETDVEKLWVE VGGRVNQELKYTRQKMGEEAMFSPQLMIQTPRQEGANVLTVEALQQHLDSAIRASRVHVY LFNRQWKLEHLCYKSGELVTEAHFMDQIIEKLHPCLIITPLDCFWEGAKLQSGMVYLPGK PPLQWTNFDPKEFLTELRTLKFQVDSWEEMLEKADVGHGYMDRPCLNPQDPDCPLTAPNK NTTKPFDVARVLTGGCHGLSRKYMHWQEELIVGGTTKNGTGPLLSAQALQTMFQLMTPKQ MFEHLKGYEEVSHINWNQDKAAAILEAWQRKYSEAVQQSVAANSSQKVLSFTTTTLEDIL KSFSDVSVIRVASGYLLMLAYACLTMLRWDCAKSQGAVGLAGVLLVALSVAAGLGLCSLL GISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALT SISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRFDIF CCFYSPCANRVIQIEPQAYLDGADGSHYSPPPTSFRTPPPSYSSHGFSQQTQITMQSTVQ LRTEYDPRTQAFYTTAEPRSQISVQPFTPAATGPASNPNASHGVHGNNNHHSNHHSRSGS SSSHGNLNNNNGSRGSGSVPFPPPPASSGVPPVSPQAGEGVCVTGESASSTRDLLSQFGE ASLGLRCLEPPCSRWTLASFAEKHYAPFLLQPTTKVVVILLFLVLLGVSLYGTTRVRDGL ELTDIVPRETSEYDFIGAQFKFFSFYNMYVVTQRAEYSQAQPLLYQLHFRFNTIRYVLRE DNGQLPLMWLHYFRDWLQGLQAAFDQDWEAGRITQSSYRNGSDDGVLAYKLLVQTGRRDK PINFNQLTRQRLVDADGIINPGAFYIYLTAWVSNDPVAYAASQANIRPHPPEWLHDRTDS MPETRLSIPAAEPIEYAQFPFYLNGLRETPQFVEAIESVRAICSNYSRQGLPSYPNGYPF LFWEQYVGLRHWLLLSISVVLACTFLVCALFLLNPWTAGIIVLVLSLMTVELFGMMGLIG IKLSAVPVVILIASVGIGVEFTVHVALAFLTAIGDRNRRAVLALEHMFAPVLDGAFSTLL GVLMLAGSEFDFIVRYFFAVLAILTVLGVLNGLVLLPVLLSYFGPYPEVTPVDGRSRLPT PSPEPPPHVVRFSVRPRHTTSGTGTGTGSDSSDSEYSSNTTGSGISQELQQYDLPATRGR AGRTEDMQYGTQTSRGRAVRTEEVRLGAGPRRTARQGDATAYSVSSSVLPESGAHPGTSR RFSKRDLQSLPPARPRMDAFEDATEAGGHYSSGGHFGSGGHRERSAGHRTRPSHNPRPNH HQPHHPNPAPTYCQPITTVTASASVTVAVHSAPPPTQSPTSSYPGHTAANSYHTAGGAEP VPTFQDPHVPLEVHISRRGTKMEAMELQDVECEAAESDCGKRAS NT seq 4635 nt NT seq  +upstreamnt  +downstreamnt atggcctcggctgctaatgcctcctccgagcaggaaaacagggaccccgatcggccgagg ataacgcggaggaacagggggaactatcgcacaacagcgccggatttggagtatttgcag cgaccaagttactgcgatgcagctttcgccttggagcaaatatccgaggggaaggcgact ggaagaaaagcaccgctgtggctgagagcgaagtttcagagactcttgtttaagttgggc tgttacatacaaaagaactgcggaaagtttttggttgtgggcctcttgatattcggagct ttcgctgttggcttacgggcggcgaatctggaaaccgacgtggagaaactctgggtagaa gtgggcggcagggtgaatcaggagctgaagtacacgcgtcagaagatgggcgaggaggcc atgttcagtccccagctgatgatccagacgccgcgccaggagggcgctaatgtgctcact gtggaggcgctacaacaacacctggattccgctatcagggccagccgagtgcacgtttac ctctttaacagacaatggaaattggaacatttatgctacaaatcaggagaacttgttacc gaagctcattttatggaccagattattgagaagctgcacccctgtctcatcatcacgccc ctggactgtttctgggagggagccaagctccagtctggaatggtctacctccccggaaag ccccctctgcagtggaccaactttgaccccaaggagttcctaacggagctgcggactctg aagtttcaggtggacagctgggaggagatgctggagaaggctgacgtgggacacggctac atggaccgaccctgtctcaacccccaagaccccgactgtcccctcactgctcccaacaag aacaccaccaagccctttgacgtggctcgcgtcctgactggcggatgccatggcctctcc aggaagtacatgcactggcaggaagagctgatcgtaggggggaccaccaagaatggcacc ggaccactactcagtgcccaggcattacagaccatgttccagctgatgactcctaagcag atgtttgagcacctgaagggctatgaggaggtgtcccatatcaactggaaccaagacaag gccgcagccatactggaggcctggcagaggaaatactcggaggcggtacagcagagtgta gccgccaactcgtctcagaaggttttgtcgtttaccaccaccactctggaagacatcctc aagtctttctccgatgtcagcgtcatacgagtggccagcggctacctgctgatgttggcc tatgcttgtctgaccatgctacgttgggactgtgctaagtctcagggagctgtaggactg gccggtgtcctcttggtggcgctgtctgtggctgcaggcctggggctctgctctctgttg ggaatatccttcaacgctgccaccacacaggtgcttccgttcctggcactaggtgtgggt gtggatgacgtgtttctcctggcccacgccttcagtgagacgggacagaacaagaggatc ccctttgaggaccgtacgggggagtgcttgaagaggacaggagcgagtgtagctctcacc tcgatcagcaacgtcactgctttcttcatggcagctctcatccctatacctgccctacga gccttctctctgcaggctgcggtggtggtggtgtttaactttgccatggtgctgctcatc ttccctgccatcctcagtatggacctgtatcgcagagaggaccgccgctttgacatcttc tgctgcttctacagcccgtgtgctaacagggtgatccagatcgagccccaggcttacctg gacggagcagacggtagtcactacagcccccctcctacctccttccgcaccccccctccc tcctacagcagccatggtttctcccagcagactcagatcaccatgcagtctaccgtccag ctgaggacagagtacgaccccaggactcaggccttctacactacagccgaacccaggtcc cagatctccgtacaaccgtttacacccgcagccaccggccccgccagcaaccccaacgcc agtcacggtgttcatggcaacaacaaccaccatagcaaccatcacagccggagtgggagt agcagtagtcacggcaacctgaacaacaacaacggtagccgtggttccggctcagtcccg ttccctcctcccccggcctcctctggcgttccccctgtctccccccaggcgggggagggg gtgtgtgtgacgggggagagtgccagctccaccagggatctgctgtctcagtttggagag gcctctctggggctgcgctgtctggagcccccttgctcccgatggaccctggcctccttc gcagagaaacactacgcccccttcctactgcagccaaccaccaaggtggtagtcatcctg ctgttcctggtcctgctgggggtcagtctgtacgggaccacacgggtacgggacgggctg gagctgaccgacatcgttcccagggagaccagcgagtacgacttcatcggggcccagttc aagttcttctccttctacaacatgtacgtggtgacccagcgggcggagtactcccaggcg cagcccctgctctaccagctgcacttccgcttcaacacgatccgctacgtactgagggag gacaacggccagctgccactcatgtggctccactacttcagggactggctgcaaggtctg caggcagcgtttgatcaggactgggaggcgggtcggatcacacagagcagctacaggaac ggttcagacgacggggtcctggcctacaaattgctggtacagaccggacgcagggacaag cccatcaacttcaaccagctgacgaggcagcgcttggtggatgcggatggcatcatcaac ccgggggcgttttacatctacctgacggcgtgggtcagcaacgacccggtggcgtacgca gcctcgcaggccaacatacggccacaccccccggagtggctccacgaccgcacagactcc atgcccgagacacgcctcagcattcctgccgccgagcccatcgaatacgcacagttcccc ttctacctcaacgggctccgcgagaccccccagtttgtggaggccatcgagtcggtgcgg gccatctgcagtaactacagccgccagggcctgcccagctaccccaacggctaccccttc ctcttctgggagcagtacgtaggcctcagacactggctgcttctctccatcagcgtggtg ctagcctgcaccttcctcgtctgtgccctcttcctgctcaacccttggaccgccggtatc atcgtgctggtcctgtctctgatgaccgtggagctgtttggtatgatggggctgataggg atcaagctcagtgctgttcctgtggtcatcctcatcgcctctgtgggcatcggagtagag tttactgtccatgtggctctggcattcctcacagcgataggggaccgtaacaggcgggca gtgctggcgttagaacacatgtttgctccggttttggacggagccttttctactctacta ggagtcctcatgctggcaggctccgagtttgacttcatcgtcaggtatttctttgctgtg ctggccatcctgacagttctgggagtgctgaatggtttggtccttcttcctgtgttgctg tcctacttcggcccctacccagaggtgacccctgtggatgggcgtagccggttacccacc ccttccccggagcctcctcctcacgtggtacgcttctcagtccgcccacgccacaccacc tccggcacgggcacaggaacgggctctgactcgtccgactctgagtacagctccaacacc acgggatcaggcatcagccaggagctgcagcagtacgacctccctgccactaggggcaga gctgggagaacagaggacatgcagtacggcacccagaccagcaggggcagagctgttaga acagaggaggtgcgactaggagcagggccaagaaggacagctagacaaggagacgccacg gcctactctgtgtcttcttcggtcctgccggagtcaggggcccaccctggtacatcccgt cgcttcagcaaaagggacctacagtcgctgcccccagcacgcccgcgcatggacgctttt gaggacgctaccgaggctggaggccattacagctccggaggccattttggctcgggcggc cacagagaacgctccgcggggcacaggacccgtccatcccacaacccccggcccaatcac caccaacctcaccaccctaaccccgcccctacttactgtcagccaatcaccacggtaacg gcctctgcgtcggttaccgtcgccgtccactctgcccctccccccactcagagccccact tcctcttacccaggacacactgcagcaaacagttaccacacagcaggcggcgcagagccg gtgcctaccttccaggacccccatgtgccactggaggtccatatcagccgcagaggaacc aagatggaggccatggagctccaggatgtggagtgtgaggcagctgagagcgactgtggc aagagggcaagctga

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