Salmo salar (Atlantic salmon): 106585210
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Entry
106585210 CDS
T04363
Name
(RefSeq) ATP-binding cassette sub-family A member 2-like
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa02010
ABC transporters
sasa04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106585210
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
106585210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sasa02000
]
106585210
Transporters [BR:
sasa02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
106585210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
DrrA1-3_C
Motif
Other DBs
NCBI-GeneID:
106585210
NCBI-ProteinID:
XP_014026634
LinkDB
All DBs
Position
ssa24:5000512..5078987
Genome browser
AA seq
2563 aa
AA seq
DB search
MGFLHQLHLLLWKNVSLKRRGPWVLAFEIFIPLVLFFILLGLRQKKPAIPVKEVSFYSAA
PLTSAGIIPIMQSLCPDGQRDEFGFLQYKNSTVTQLLERIREVVLQNHLFTADRPGLGQE
LESLQQHLESLSTSAGPYPLDNNFNTSHGFTVASVLKNQSVFHQFLVRNLSLPNDTASLL
LSTPVNLKEVFNLIFGLYPRTGGGSSHSSGGEKETTHTPAEKILQLEEKLLGVMQSLDGG
LIHKALRDPTKAAHRQALLKLMSQALGLAGGGAGQRYDPQGLKEVEGVLLTGAMLEMLTC
GEDGPSELSKILLVPEKQQSLLQAYHSAACGGGAGQRTERFGEMSQELREQIDTQSLIDK
LRLEQANSSAPLSQSHLGALLKDLADVERLLRDVDLLSGLARLLPKGACVGHAPPGAPAN
TTTSWSLNATTWGPNTTENPWEEGGEEGRGREKENVKEENPHSFSTFVQLWAGLQPILCG
NNRIIEPEALKQGNMSSLGFTSKEQRNLGLLVHLMTTNPKILYSPIGSQVDKVIQKANET
FAFVGNVTHYARVWLNISAQLRTYLEEGKLHHHLAWMQQLTSDLRGHPELLNGTDSDLLR
GLLEGNYTLPNTSTLLEQLDTIDNAACGWTHFMSKVSVDIFKGFPDEDSIVNYTLNQAYH
DNISVFASVIFQTNLDGSLPPHVLYKIRQNSSFTEKTNEIRRAYWRPGPNTGGKFYFLYG
FVWIQDMMERAIINTFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWVYS
VAMMIQHIVAEKEHRLKEVMKMMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGRVLL
HSDIFIIWLFLSIYAIATIMFCFLVSVIYSKAKLASACGGIIYFLSYVPYMYVAIREEVA
HDKITAFEKCIASLMSTTAFGLGSKYFALYEVAGVGIQWRTINQSPVEGDDFNLGLSMMM
LIIDASVYGVLTWYIEAVHPGMYGLPRPWYFPLQKSYWLGSGRVETWECPWGGGARLSVM
EEDQACAMEHRRSGRAKPDLRLEEMRGIEEEPSHLPLVVCIDKLTKVYKMGNKLALNKLS
LNLHENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSATIYGHDIRTDMERIRQNLGMCPQ
HNVLFDKLSVEEHLWFYSKLKGMAEEDIRKEMDKMIDDLELNNKRHSLVQTLSGGMKRKL
SVAIAFVGGSRAVILDEPTAGVDPYARRAIWDLILKYKQGRTILLSTHHMDEADLLGDRI
AIISHGKLKCCGSPLFLKSTYGDGYKLTLVKKQSERGDQVTQPQPPSTLSPSSSSLSPSS
SLSPSSSSLSPCSEARVTQFIRQFVGSCLLLSDSNTELSYVLPSEAVKKGCFERLFQALE
QNLSILALTSFGVMDTTLEEVFLKVSEEDQSLENSDADMKDSLGGISVGKPAAAVGLGGS
VKPQEPGAPAGSSSSVERPEVELSNLVMCSRLSQSQSSLRSSSSLGSVLGDEEGLYVDFY
GDYCRLFDSGRDLHSTSLRADVEEASPEPVVLDGQGSFKLEGWWLKLRQFHGLIVKRFHC
AKRNTKGLFSQILLPAFFVCVAMTVALSVPSIGHRGVTSVFCSSGDLPPLILSPSQYHNY
TQPRGNFIPYANEDRPQYRSKLSPDASPQKIANTLRLPSGVGATCVLKTPFNSTLDQLAQ
TLNPSANNSKTLAARYFDSMCLDSFTQGVPLSNFVPPPPSPAPSDDPDTRFEDGLWNFTA
TTPTTARETVTSPPTLPLFIREPVRCICSMQGTGFSCPSGVGGRPPIMKVVTGDILVDIT
GRNVSEYLLYTSDRLRLHRYGGLTVGNIQKSVPASFGKKTPPMVRKIAVRRSAQVLFNNK
GYHSMPTYLNVLNNAILRANLPPGKGNPAAYGITLTNHPMNRTSASLSLDYLLQGTDVVI
AIFIIVAMSFVPASFVVFLVAEKSTKAKHLQFVSGCDPVIYWLANYIWDMLNYLVPATCC
VLILFVFDLPAYTSPTNFPAVLSLFLLYGWSITPIMYPASFCFEVPSTAYVFLIVINLFI
GITATVATFLLQLFEHDKDLKLVNSYLKSCFLIFPNYNLGHGLMEMAYNEYINEYYAKIG
QFDKIKSPFEWDIVTRGLVAMTIEGFVGFFITILCQYNFLRKPLRVPVSSQLIEDDDVDV
ACERRRVLRGDADNDMLKIDNLTKVYKSRKMGRILAVDRLCLGVRPGECFGLLGVNGAGK
TTTFKMLTGDESTTGGEAFIGGNSILRELLRVQQSIGYCPQFDALFEDLTAREHLELYTR
LRGIPWKDEQRVVSWALEKLELSKYADKPAGTYSGGNKRKLSTAIALIGYPSLIFLDEPT
TGMDPKARRFLWNLILDIIKTGRSVVLTSHSMEECEALCTRLGIMVNGRFKCLGSIQHLK
NRFGDGYMITVRTRTSSNVKEVERFFNRNFPEAVLKERHHTKVQFQLKSDRISLAQVFSK
MEQVVEALGIEDYSVSQTTLDNVFVNFAKKQSDNLEQQESSPPGGGQSPLQRLLTLLRPR
PANTELSALVSEEPEELESDDDEGLISFEEERVQLSFNTDTVC
NT seq
7692 nt
NT seq
+upstream
nt +downstream
nt
atgggattcctccaccagctacatcttctgttgtggaagaatgtgtctttgaagaggaga
ggaccgtgggtgttggcctttgagatcttcatccctctggtcctcttcttcatcctgctg
ggcctgcgccagaagaaacctgccatccccgtcaaggaagtctccttctacagcgcagct
cccctcacctcagcaggcatcattcccatcatgcagtctctgtgtcccgacggccagagg
gacgagttcggcttcctacagtacaagaactcaactgtcacccagttgttggagcggatc
cgtgaggtggtgttacagaaccacctgttcacagcagacaggccaggactgggccaggag
ctggagtccctacagcaacacctggagagcctcagcacatccgcagggccctacccactg
gacaacaatttcaacaccagccatgggttcacagtagccagtgtgttgaagaaccagtca
gtgttccatcagttcctggtcaggaatctgtccctccccaatgacaccgccagcctgctg
ctctccactcctgtcaacctcaaagaggtattcaacctgatctttggcctgtaccccaga
actggaggggggagtagtcacagttctggaggggaaaaagagaccacacacacccctgca
gagaagatccttcaactggaggagaagctgctgggagtcatgcaaagtctggatggtgga
ctgatccacaaagctttacgagacccaaccaaagcagcccatcggcaggccctactcaaa
ctcatgtcccaggctttaggcctagcaggaggaggggcaggccagagatacgacccccag
ggactgaaggaggtggagggtgttctcctgactggtgccatgttggaaatgcttacctgt
ggggaggatgggcctagtgagctgagcaagattctattggttcctgagaagcagcagtcc
ctgctccaggcctatcacagcgcagcatgtggtggtggggcgggacaaaggactgagcgg
tttggagagatgagccaggagctccgagagcagatagacacacagagcctcattgacaag
ctgcgtctggagcaagccaactcctcggcccctctgtcccagtcccacctgggtgctctg
ctgaaggacttggctgacgtggagaggctcctcagggatgtagacctgctgtcaggcctg
gctcgcctgctccccaagggcgcctgtgtcggccacgccccccctggggctccagccaac
accaccacttcctggtccctcaacgccaccacctgggggcccaacaccaccgagaacccc
tgggaggagggcggagaggaggggagaggacgagagaaagagaatgtgaaagaagagaac
cctcactcgttttctacctttgtgcagctgtgggcagggctgcagcctattctgtgtggg
aacaacagaatcattgagccagaggctttaaagcaagggaatatgagctctctgggcttt
accagtaaagagcagcgcaatctgggcttactagtgcatctgatgactacaaatcccaag
atcctctactctcccatcggctcacaggtggacaaagtcattcagaaggccaatgagaca
tttgcgtttgtggggaacgtgactcactacgcccgggtgtggctcaacatctctgcccag
ctcaggacttatctggaggagggcaagctgcaccaccacctggcctggatgcagcagttg
acctctgacctacgtggtcacccggaactgctgaatggaacagacagtgatctgctgcgt
gggttgctggagggcaactacaccctgcccaacacctccaccctgctggagcagctagac
accattgacaacgccgcctgtggctggacacacttcatgtccaaggtcagtgtggatatc
ttcaagggttttccggatgaggacagcatcgtcaactacacactgaaccaagcttaccat
gataacatctcagtgtttgccagtgtgatattccagaccaacctagatggctccctgcct
cctcatgtcctctataagatcagacagaactccagcttcacagagaaaaccaacgagatc
cgccgggcctactggcgcccagggcccaacacggggggaaagttctacttcctctacggc
tttgtctggatccaggatatgatggagagagccatcattaacacgtttgtgggccatgac
gtggtggagcctggcaactatgtccagatgttcccttacccctgctacacaagagacgac
ttcctgtttgtgatcgagcacatgatgcctctgtgcatggtgatctcctgggtctactct
gtagccatgatgatccaacacattgtggcggagaaggagcaccggctcaaagaggtgatg
aagatgatgggtctgaacaacgcggtccactgggtggcctggttcatcactgggtttgtc
cagttgtccatctcagtgacggccctgacggccatcctgaagtacggtcgggtgctcctc
cacagcgacatcttcatcatctggctgttcctctccatctacgccatcgccaccattatg
ttctgtttcctggtgtcagtgatctactccaaggccaagctggcgtcagcgtgtggtggg
ataatctacttcctcagctatgtcccatacatgtacgtggccatcagggaggaggtggcc
catgacaagatcacggccttcgagaagtgcatcgcttctcttatgtcgaccacagcgttt
ggcctggggtctaagtactttgccctgtacgaggtggctggggttggtatccagtggcgc
accatcaaccagtcacctgtagagggcgatgacttcaaccttggcctgtccatgatgatg
ctcatcatcgatgctagtgtgtatggagtactcacctggtacatagaggctgtgcatcca
gggatgtatgggctgcctcggccgtggtacttccccctgcagaagtcctattggctgggc
agtgggcgtgtggagacatgggagtgtccctgggggggaggggccaggctgagtgtcatg
gaggaggaccaggcgtgtgccatggaacaccggcgatctggtagggccaagcctgacctt
agacttgaggagatgcgtggtattgaagaggagcccagccacctgcctctggtggtttgt
atagacaagctgaccaaggtctacaagatgggcaataagctggccctcaacaagctgagc
ctcaacctccacgagaaccaggtggtgtccttcctgggacacaacggagccggcaagacc
accaccatgtctattcttacaggtctgttcccgcccacctctggctcagccaccatctac
ggccatgacatccgtactgacatggagcgtatcaggcagaacctgggcatgtgtccccag
cacaatgtgctctttgataagctcagcgtggaggagcacctgtggttctactccaaactc
aaaggcatggccgaggaagacatccgcaaggagatggacaagatgatagacgatctagag
ttgaataataagcgtcacagcctggtgcagactctgtctgggggaatgaagaggaagctg
tccgtggccatagcgtttgtgggcggctcccgggccgtcatcctggatgagcctacggcg
ggggtggacccctacgcacgcagagccatctgggacctcatcctcaagtataaacagggt
cgcaccatcctgctgtccacccaccacatggatgaggctgacctgttaggagaccgcata
gccatcatctcccatgggaaactcaagtgctgcggctccccactctttctcaagagcacc
tacggagacggctacaaactcaccctggtcaagaaacagagtgagaggggagaccaggtc
acccagccccagcctccctcaaccctgtccccttcctcctcctccctgtccccctcctcc
tccctgtccccctcctcctcctccctgtctccctgctcggaggcccgggtcacccagttc
attcgtcagtttgtggggtcctgtctgctgctgtctgactccaacactgagctatcctat
gtgttgccatctgaggctgtcaagaagggctgcttcgagaggctatttcaggcattggag
cagaatctgtccatcttggcactgaccagcttcggagtgatggacaccactctggaggag
gtcttcctcaaggtgtccgaggaggaccagtccctggagaacagtgatgccgacatgaag
gattccctaggcggtatctcagtggggaaacctgctgctgcagtgggtctggggggctct
gtaaagccacaggagccgggggctccggcggggagcagcagcagtgtggagaggccagag
gtagagctgtctaacctggtgatgtgctccaggctcagccagagccaatcctccctgcgc
tcctcctcctccctgggttccgtactgggggatgaggaagggctctacgtagacttctac
ggagactactgccgcctcttcgacagtggacgggaccttcactctaccagcctgagggcg
gatgtggaggaggcctcccctgagcctgtggtcctggatgggcagggcagcttcaagctg
gagggctggtggctgaagctacgccagttccatggcctcatcgtcaagaggttccactgc
gccaagaggaacaccaagggcctcttctcacagatcctgctgcccgcattcttcgtctgc
gtggccatgactgtcgctctgtctgtgccttccatcggtcatcgtggtgtgacgtctgtc
ttctgttcttcaggagatctgccaccactgatcctgtccccatcccagtaccacaactac
acccagccccgtggcaacttcatcccctacgccaacgaagaccgcccacagtacaggagt
aagctgtccccagacgccagccctcagaagatcgccaacacgctgcgtctgccatcgggc
gtgggcgccacctgcgtcctcaaaacgcccttcaacagcaccctggaccagctggcgcag
acgctcaaccccagcgccaacaacagcaagaccctggccgcccgctactttgactccatg
tgtctggactccttcacccagggagtgccgctgtccaactttgtaccccctcccccctcg
ccagccccctccgatgaccccgacactcgctttgaggatgggctgtggaacttcactgcc
accactcctaccactgccagggaaacggtgacgtctcctcccaccctgcccctgttcatc
cgggagccagttcgttgtatctgctccatgcaggggacgggcttctcctgccccagcggg
gtgggggggcggccgcccattatgaaggtggtcaccggggacattctggtagacatcacc
gggcgcaacgtgtcagagtatctcctctatacgtctgacagactgcgcctgcacagatat
ggaggactcacagtaggcaacatacagaaatcagtcccagcatcctttgggaaaaagact
ccgcccatggttcgcaaaatagcagtccgcagatcagctcaggtgctgttcaataataaa
gggtaccacagcatgccaacctatctcaacgtcctcaacaatgccatcctgcgtgccaac
ctgcctccaggcaagggcaaccctgctgcatatggaatcacactgaccaaccaccccatg
aaccgcaccagtgcaagcctctctctggactacttgctccagggcactgatgtggtgata
gctatcttcatcatcgtggccatgtccttcgtaccagccagctttgtggtctttctggtg
gcagagaagtcgaccaaggccaagcacctgcagtttgtgtctggatgtgatcctgtcatc
tactggctggctaactatatatgggacatgttgaactacctggtgcctgccacgtgctgt
gtccttatcctgtttgtctttgaccttcctgcgtacacatccccaaccaacttccctgcg
gtcctgtctctcttcctcctctacgggtggtctatcactcctatcatgtacccggcctcc
ttctgtttcgaggtgcccagcacagcctatgtgttcctcatcgtcatcaaccttttcata
ggcatcactgccacagtggccaccttcctgctgcagctctttgagcatgacaaggatctg
aaactggtgaacagctacctaaagtcctgtttccttatcttcccaaactacaacctgggt
cacggcctgatggaaatggcctacaacgaatacatcaatgagtactatgctaaaataggt
cagtttgacaagatcaagtctccatttgagtgggacattgtgactcgagggctggtagcc
atgacaatcgagggctttgtaggattcttcatcaccatcctgtgtcagtacaacttcctc
aggaaacccttaagagtaccagtgagcagccagctcatagaggatgatgatgtggatgtg
gcctgtgagagacggagagtactgagaggagatgctgacaacgacatgctgaagattgac
aacctcaccaaggtgtacaagtcgaggaagatgggtcgtatcttggctgttgaccggttg
tgtttgggcgtgcgtcctggggagtgttttggcctcctgggggtgaacggcgcagggaag
accaccacctttaagatgctgactggtgacgagagcaccacgggaggagaggccttcata
gggggaaacagtatcctgagggagctgttgagagtgcagcagagcattggttactgccct
cagtttgatgccttgtttgaagacctgacagccagagagcacctggagctgtacacacgc
ctccgaggcatcccctggaaggacgagcagagggtggtctcatgggccctagagaaactg
gagctctccaagtatgcagacaagcccgctggaacctacagtgggggaaacaagcgcaag
ctgtctactgccatcgccctcatcggatacccctctctcatcttcctggatgaacctact
acagggatggaccctaaggcccgcagattcctctggaacctcatccttgatatcatcaag
acgggacgctctgtggtgctgacatcacacagtatggaggaatgtgaggctctgtgcacc
agactgggcatcatggtcaacggcaggttcaaatgcctgggcagcatccagcacctcaag
aacaggtttggtgatggttacatgatcacagtgcggactagaaccagttccaatgtgaag
gaggtggagagattcttcaacaggaatttccctgaggctgtactaaaggagcgccaccac
actaaggtccagttccagctgaagtccgacaggatctccctggcccaggtgttcagtaag
atggagcaggtggtggaggcgctggggatagaggactactctgtcagccagaccacactg
gacaatgtgttcgtgaactttgccaagaagcaaagtgacaaccttgagcagcaggagagt
tccccccctggtggaggccagtcacccctgcagcgcctgctcaccctgctgaggccccgg
ccggccaatacggagctcagcgccctggtcagcgaagagccggaggaactggagagtgac
gatgatgagggcctcatcagctttgaagaggagagggtgcagctctcctttaacacggat
actgtctgttga
DBGET
integrated database retrieval system
