Salmo salar (Atlantic salmon): 106585293
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Entry
106585293 CDS
T04363
Name
(RefSeq) vacuolar protein sorting-associated protein 33A-like
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04140
Autophagy - animal
sasa04142
Lysosome biogenesis
sasa04145
Phagocytosis
sasa04148
Efferocytosis
sasa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
106585293
04142 Lysosome biogenesis
106585293
04140 Autophagy - animal
106585293
04148 Efferocytosis
106585293
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106585293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106585293
Membrane trafficking [BR:
sasa04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
106585293
Hops complex
106585293
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
RMD9_mid
Takusan
Motif
Other DBs
NCBI-GeneID:
106585293
NCBI-ProteinID:
XP_014026836
UniProt:
A0A1S3PGV4
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Position
ssa24:complement(17841171..17853541)
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AA seq
601 aa
AA seq
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MSAHLSYGRVNLNILREAARKELREFLDKCGGSKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKGGRLPAADVKNIIFFVRPRLELMDIIAENVISEDKMHSPRDFHMLFVPRRSML
CEQRLKEQGVLGSFINIDEYILDLIPYDGDLLSMESEGAFRECYLESDQTSLYHTAKGLM
TLQALYGTIPQIFGKGECARHVANMMLRMKREFAGSQTQILPVFDSLLLLDRNVDLLTPL
ATQLTYEGLIDEVYGITNGYVKLPPEKFSAQKKQGEAGKDLPTEPKKMQLNSAEELYAEI
RDKNFNGVGAALSKKAKIISAAFEERHSAKTVGEIKQFVSQLPHMQAARSSLANHTSIAE
LIKDITTSEAFFDNLTVEQEFMTGVDTDKVNTYIEDCIAQKDPLIKILRLVCMQSVCNNG
LKQKLLDYYKREILQTYGYEHMLTLNNLEKTGLLKPQTSTRNNYPTIRKTLKLWMEDANE
QNPNDISYVYSGYAPLSIRLTQVLARPGWRSIEEVLKMLPGPHFEERQQLPAGLHKKRQQ
GENRTTLVFFLGGVTYAEIAALRFLSQMEDGGTEYIIATTKLINGTSWIKSLMDRPEAQA
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgcacttatcatatggaagagtaaatttaaacattttgagggaagcagcgcgg
aaggagctccgtgagtttttggacaaatgtggaggaagcaaggctattgtgtgggatgaa
tacctgactggaccctttggattgatagcacaatattctttgttgaaggaacatgaggtg
gagaagatgttcaccctcaaaggggggcgtctccctgctgctgacgtgaaaaatatcatc
ttctttgtccgtcccaggcttgagctgatggatattatagctgaaaatgtaatcagtgag
gataagatgcattccccacgtgatttccacatgttgtttgtgccacggcggagcatgctc
tgtgagcagcggctgaaagagcagggggtcctgggctcgtttatcaacatagacgagtac
atcttagacctcatcccctatgatggagacctgctctccatggagtctgagggggctttc
agggagtgctatctggaaagtgaccagacaagtctgtaccacaccgccaagggccttatg
actctccaggctctgtatgggaccatcccccagatatttgggaaaggggagtgtgcacgg
catgtagctaacatgatgcttaggatgaaaagggagtttgctggcagccagactcagatc
ctacctgtgtttgactcactgctgctgctggaccgcaatgtagacctgctcacccctttg
gccacacagctcacctacgagggcctcattgacgaagtctatggaatcaccaacggttat
gtgaagttgcctcctgagaagttttctgcccaaaagaagcagggtgaggcgggtaaagac
ctgcccacggagcccaagaagatgcagctcaactcagcagaggagctgtatgctgagata
cgggacaaaaacttcaatggcgtaggggctgcactgagcaagaaggccaagatcatctcc
gctgcatttgaggagcggcatagtgccaaaacagtgggtgagataaagcagtttgtgtcc
cagctgccccacatgcaggcagcacggagctcgctggccaatcacacctccatagctgag
ctcatcaaggacatcaccacctctgaggccttctttgataacctgacagtggagcaggag
tttatgactggagtcgatacagacaaggttaacacatacatagaggactgtatcgcccag
aaggatcccctaatcaaaatcctgcggctggtctgtatgcagtcggtctgcaacaatggc
ctcaagcagaagttgttggactactacaagagggagattctgcagacgtatggatatgaa
cacatgcttaccctcaacaacctggagaagacaggtcttctgaagccccagacaagcacc
aggaataactaccccaccatcaggaagacactcaaactctggatggaggatgccaatgaa
cagaaccccaacgacatctcctatgtgtacagtggctatgctcctctcagcatccgtctg
acccaggtgttggccaggcctggctggcgcagcatcgaggaggttctgaagatgctccct
ggtccacactttgaggagagacaacagctgcctgctggtctccataagaaacgccagcaa
ggggagaacaggaccacactggtgttctttctgggaggggtgacatacgcagaaattgct
gccctgcgcttcctgtctcagatggaggatggtggcacagaatacatcattgccaccacc
aagctcatcaatggtaccagctggatcaaatccctaatggaccgccctgaggctcaggcc
tcctga
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