Salmo salar (Atlantic salmon): 106585428
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Entry
106585428 CDS
T04363
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04010
MAPK signaling pathway
sasa04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106585428
04020 Calcium signaling pathway
106585428
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106585428
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
106585428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
106585428
NCBI-ProteinID:
XP_014027082
UniProt:
A0A1S3PHI6
LinkDB
All DBs
Position
ssa24:26053029..26216901
Genome browser
AA seq
2474 aa
AA seq
DB search
MARFEEELSNRRGGVCQAGPPRVAGRPAGHPSGPRVYKQSMAQRARTMAIYNPIPVKQSC
LTVNRSLFIFSEDCIIRKYAKKITEWPPFEYLILATIIANCIVLALEQHLPASDKTPMSE
RLDDTEPYFIAIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGMLATVGADFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGMLLFFAILMFAIIGLDFYMGK
FHRTCFRTDTGEQAAEFPCGMEAPARTCENGTVCQEYWIGPNYGITNFDNILFAILTVFQ
CITMEGWVDILYNANDASGNTWNWIYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKR
QEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKHAEEKSPLDGAWYKRKHNNPVLKR
AKKSKNDLINAEEGEDHFTDVSSVGSPFTRATPPGSPFTRAAPPGSPFTRAAPPGSPFTR
ATPPGSPFTRATPPGSPFTRATPPGSPFTRASLKSSKNDSASYFRRKEKRLRFTIRRLVK
AQSFYWTVLCLVGLNTLCVAIVHYDQPEWLTYALYLAEFVFLGLFLTEMSMKMYGLGPRN
YFHSSFNCFDFGVIIGSIFEVIWAVVKPGASYGISVLRALRLLRIFKVTKYWNSLRNLVV
SLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGMFNFEEETPTTNFDTFPAAILTVFQIL
TGEDWNAVMYHGIESHGGVRWGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTK
DEEEQEVAITKKMALQMVKEVKEVSPMSAANISITALHSMLYTGQHGAERAMPASFVKQS
RGALSRSSSVCSVNSLSYVCSPVHHYLSKEQQKSLKMMSVWEQRTTQLRRHNLRASSEAL
YSELDPEERLRMSSALHIRPDMKTHLDRPLVVKPHDGPGPMGHLKPQTPEDTDNPGDPAG
PQPRRHHRDRERPIDEANENGDPGKEGRHHVHHSRSKYPNGTRGKEGKSERSHSREGGRR
HHHQTSVDEGGGGGTGTGERVHRHHHSHRQAREGNSTVNSGRKDERRSRHKDGRSGERCS
RGENGANGERRRHKTHSYRGQSTLAGEEHSERERGKGHRDRYVESEGDSMATSTQQDPGD
QRWGTEITEDSDNQRNVRRTGWTAVHIPPVTITSLPGETTLIPMNSIDCETLPMNEEKKT
LEVLTRNGPRPILPYSSMFVFGQTNMVRRLCHYIVSLRYFEMCILVVISMSSIALAAEDP
VQANAPRNNVLKYLDYVFTGVFTFEMVIKMVDLGLLLHPGSYFRDLWNILDFIVVSGALV
AFAFSSFMGPPQGVPRGSKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKN
VFNILIVYMLFMFIFAVIAVQLFKGKFFYCSDESKGLEKDCRGHFLDYDKDEVAAQPRVW
KKYEFHYDNVLWAFLTLFTVSTGEGWPDVLKHSVDATFEDQGPSPGYRIEISIFYVVYFV
VFPFFFVNIFVALIIITFQEQGDKAMSECSLEKNERACIDFAINAKPLTRYMPENVQSFQ
YRMWKFVVSPPFEYAIMIMIALNTVVLMMKFHGAPDFYEAMLKHFNIVFTALFSLECILK
IIAFGPLNYLKDAWNVFDFVTVLGSITDIVVTEINTTDRLLNLSFLRLFRAARLIKLLRQ
GYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIELNEDTSITHHNNFRTF
LQALMLLFRSATGEAWHEIMLSCLSHRACDERSGNLGKECGSDFAYFYFVSFIFLCSFLM
LNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRIKYLDMYQILLHMSPP
LGLGKKCPPRVAYKRLVKMNMPIADDNTVHFTSTLMALIRTALEIKLASGMVAQRLSDAE
LKKELSQVWPSLSQKTMDLLVTPHKPNELTVGKVYAALMIFDYYKQNRAKRLKEQQQQQQ
QQNATGSQGKVGALFKPILPLTHKQEKVKEKAMTNVEPPCELLPQPQSQALPRPSSTLLN
NGGTLPGHDGTMKGSSSWVSEKSREVHRPRIKTPVQRGQSEDVPNLTIPQESVEMRKMDT
SCSTVPGPGSGLESQGRAVSMPRLNAELQRSKSRHSPGTLLAPVPDCSPMKRSASTHAPQ
RPQEVNLHEHTLERPSTEERRHHHRHHHRCHHHRERDKKQRSLDRTPSTIGAPGDPAAEP
SSRDRVQDRGRSHERKNHSTAGEKQRYYSCDRYSSREHCHTTKSATTSCATSPSEVQEPS
INKQGSGSVKGSPVMLTSGAITPSRGRRQLPQTPLTPRPGVTFKTANSSPVHFVSAQCGS
GLPTLSPGRLSRGLSEHNALLHSGTSHIPSPITRISSEPFLGYSHSDPQGQGGPYCNLRD
ELLSPYGARAHSPRTARPQMRPGALHLPPPPQQRRAVPNGYHFTFGGNGNASLGSGSGAR
PPRYYHEAEEDEWC
NT seq
7425 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcgaagaggaactatctaaccggcgtggaggggtctgtcaagcgggccca
ccaagagtggcaggtaggccagcaggccacccaagcggccctagggtgtacaaacaatca
atggcccaacgagccaggacaatggccatttacaaccccatccctgtcaagcagagctgt
cttactgtcaaccggtctctattcatctttagtgaggactgtatcatacggaaatatgcc
aaaaagattaccgaatggcctccatttgaatacctgatcctggccaccattatagccaac
tgcatcgtccttgccttggagcagcacctaccagccagcgacaagacccccatgtcagag
cgcttggatgacacagagccctattttattgcaatattttgttttgaagctggcattaag
atcatcgcccttggttttgcgtttcacaaaggctcctatcttcggaatggctggaatgta
atggactttgtggtggtgctaacagggatgctggctacagtgggagcagactttgacttg
agaactctgagggcagtacgggtcctgaggccactgaaactggtgtctggaatccctagt
cttcaggtagttctaaagtccatcatgaaagccatggtgcctctgctgcagattggcatg
ctgctcttcttcgctatactcatgttcgcaatcatcggcctggacttttacatgggcaag
ttccaccggacctgcttcaggactgatacaggtgagcaggcagcagagttcccctgtggt
atggaggctccagcgaggacctgtgaaaatggaactgtgtgtcaggaatactggatcggc
cccaactacggcattaccaactttgacaacatcctctttgctattctgaccgtcttccag
tgcatcaccatggagggatgggtggacatcctctataacgccaacgatgcctcagggaac
acctggaactggatctacttcatccccctcatcatcatcggatccttcttcatgctcaac
ctggtcctgggagtcctgtctggggagtttgccaaggagcgtgagcgtgtggagaagagg
caggagtttctgaagcttcgcaggcagcagcagatcgagagggagctgactggatacctg
gaatggatatgcaaggcagaggaggtgatgttggcagaggaggacaagcatgctgaagag
aagtctcctctggatggagcgtggtacaagaggaaacacaacaacccagtgttaaaaaga
gccaagaagagcaagaatgacctgatcaacgctgaggagggcgaagaccacttcactgac
gtctcatctgttgggtctccgttcacccgggctactcccccagggtctccgttcacccgg
gctgctcccccagggtctccgttcacccgggctgctcccccagggtctccgttcacccgg
gctactcccccagggtctccgttcacccgggctactcccccagggtctccattcacccgg
gctactcccccagggtctccgttcacccgggccagcctgaagagcagcaagaacgacagt
gcttcctacttccggaggaaagagaagcggctccgcttcaccatcagacgcctggtcaag
gcccagagcttctattggacagtcctgtgtctggtgggcctcaacacactgtgtgtggcc
atcgtccattatgaccagcctgagtggctcacctatgcgctgtatttggcagagtttgta
ttcctgggcttgtttctgactgagatgtccatgaaaatgtatggactaggacctaggaac
tacttccattcctctttcaattgttttgattttggagtgattataggcagtatttttgag
gtgatctgggcagttgtgaaacctggggcctcctacggcatcagcgtcctgcgagctctc
cgtctgctcaggattttcaaagtcaccaagtactggaactctttgaggaacctggtggtc
tctttactcaactccatgaagtccattatcagcctgctcttcctcctcttcctcttcatc
gtggtgttcgccctactgggcatgcagctctttgggggaatgtttaattttgaggaggag
acaccaacaacaaacttcgacacctttccagcagccattctcacagttttccagatactg
acaggagaggactggaatgcagtgatgtatcatgggatagagtcccatgggggcgttcgg
tggggaatgttctcctctatctacttcatcgttctcaccctgtttggaaactacactctg
ctcaatgtcttcttggccattgctgttgacaaccttgcaaacgcacaggagctcactaag
gacgaggaggagcaggaggtggccatcactaagaagatggccctccagatggtcaaggag
gtgaaggaggtcagccccatgtcggcagctaacatctccatcacagcgctacacagtatg
ctgtacacaggccaacatggagcggagagggcaatgccagcaagttttgtaaagcaaagt
cgaggtgcactctctcgcagctcgtccgtctgcagcgttaattcactgagttatgtctgc
tccccagtccatcactacttgagtaaggagcagcagaagtctctgaagatgatgtcagtg
tgggagcagcgcaccactcagctgaggagacacaacctgcgggccagcagtgaggccctg
tacagcgagctggaccctgaggagaggctacgcatgtcctccgccctgcacatccgccct
gacatgaagacccacctggaccggcccctggtcgtgaagccccacgacggccccgggccc
atgggccacctcaagccccagacccctgaggacacggataaccctggggacccggccggc
ccccagccacgtaggcaccaccgggacagggagagacccatcgacgaggccaatgagaat
ggagatccaggcaaagagggtaggcaccatgtccatcacagtcgcagcaagtaccccaat
gggactcggggtaaggaggggaagagtgagcggtcgcatagccgagagggtggcaggagg
caccaccaccagacctcagtggacgagggaggtggagggggaactgggacgggagagaga
gtgcaccgccaccaccactcccacagacaggccagagagggtaacagcactgtcaacagc
ggacgcaaggatgagcgcaggtcacgccacaaagatggacgctcgggagagcgatgctcc
aggggagagaacggggccaatggggagaggaggagacacaagacccacagttacaggggc
cagtccacactggcgggagaggagcacagtgagagggagagggggaagggccacagggac
agatatgttgagtctgagggcgactccatggccactagcacccagcaggatcctggagat
cagaggtggggcacagagataactgaggactcagacaaccagaggaacgtcagacggaca
ggatggacggccgtccacataccccctgtcaccatcacctccctgcctggagagaccacc
cttatccccatgaacagtatagactgtgagacattgcctatgaacgaggagaagaagacc
ctggaggtgttgactcggaacggacccagacccatcctcccctacagctccatgtttgtg
tttggccagaccaacatggtgcggcgtctgtgtcattacattgtgagcctgcggtacttt
gagatgtgtatcctggtagtgatatctatgagtagcattgcattggctgctgaggaccct
gtccaggccaatgctccacgcaacaatgtgctcaagtatctggactacgtctttacggga
gttttcacatttgagatggtgattaagatggttgacctgggccttctgctccatcctggt
tcttacttcagagatctctggaacattctggacttcattgtggtcagtggagcactggtg
gcatttgcattttcgagcttcatgggaccgccacaaggtgtgcccagagggtccaaagga
aaggacatcagcaccatcaagtccctcagagttctgcgagtcttacggcccctcaagacc
atcaagcgcctgccaaagctgaaggctgtgtttgactgtgtggtcaactccctgaagaac
gtcttcaacatcctcattgtctacatgctcttcatgttcatcttcgctgtcatcgctgtg
cagctgttcaagggaaagttcttttactgctccgatgagtccaagggactggaaaaggac
tgcagaggtcatttcctggactacgataaggatgaggtggccgcccagcctcgggtgtgg
aagaaatatgagttccactatgacaacgtgctgtgggccttcctcactctcttcactgtg
tccactggagagggctggcccgatgttctgaagcactctgtggatgctacctttgaggac
cagggtcccagtccaggctaccgtatagagatctccatcttctacgtggtctacttcgtg
gtctttcccttcttcttcgtcaacatctttgtggccttgatcatcattaccttccaggag
caaggggacaaggccatgtcagagtgcagcctggagaaaaacgagagggcctgcattgac
tttgccatcaacgccaagccactgacgcgttacatgccagagaacgtgcagtccttccag
taccggatgtggaagtttgtggtgtcacccccgtttgagtacgccattatgatcatgatc
gccctgaacaccgtggtgctcatgatgaagttccatggagctccagacttctacgaggcc
atgttgaagcacttcaacatcgtcttcactgccctcttctctctggagtgcattctgaag
atcatcgccttcggaccactgaactacctgaaggatgcctggaacgtgtttgactttgtg
accgtgctgggaagtataactgacatcgtggtcacagaaatcaatactacggaccggctt
ttgaacctgagttttctgaggctgttcagagcagctcgtctcatcaaactactgaggcaa
ggctacaccatccgtatcctgctgtggaccttcgtccagtcctttaaggccctgccctat
gtttgccttctgatagcaatgctgttcttcatctatgccatcatcggtatgcaggtgttt
ggaaacattgagctcaacgaggacacatccatcactcaccacaacaacttccgcactttt
cttcaggctctcatgctactgttcaggagtgccacaggggaggcgtggcatgagatcatg
ctgtcgtgtttgagtcacagagcctgtgatgagaggtcaggcaacctggggaaggagtgt
ggcagcgactttgcctatttctactttgtgtccttcatcttcctctgctctttcctgatg
cttaatctgtttgtggctgtgatcatggataactttgaatacctgactcgagactcttct
atactggggcctcatcatctggatgagttcatccgtgtttgggctgagtacgaccctgct
gcctgtggccgtatcaagtacctcgatatgtatcagatactcctccacatgtccccaccc
ttaggtttgggaaagaaatgtccgccaagagtcgcctacaagcggctagtcaagatgaac
atgcccatcgctgatgacaacacagtccacttcacctccacactcatggccctgatccgg
acggccctggagatcaaactggcctcagggatggttgcccagcgtctctctgatgctgaa
ctgaagaaagagctctcccaggtttggccaagcctctcacagaagactatggatctgttg
gtgacaccacacaaacccaatgagcttactgttgggaaggtgtatgcagccctgatgatc
tttgactactacaagcagaaccgagccaagaggctcaaggaacagcaacagcagcagcag
caacagaatgctactggctcccagggaaaggtgggggctctgtttaaaccaatactgccc
ctgactcacaagcaggagaaagtgaaggagaaggccatgaccaacgtggagcctccctgt
gagctactgcctcagccccagtctcaggccctacctagacccagctccaccctgctcaac
aacggaggcacactgccaggccatgacggcaccatgaaaggatcatcctcctgggtgtca
gagaagtctagagaggtccacagacccaggattaagacacctgtccaaaggggccagtct
gaggatgtcccaaacctaaccatcccccaggagtcagtggagatgaggaagatggacacc
agttgcagcacagtgcctggtcctgggtctggactggagagccagggaagagctgtgtcc
atgccccgcctcaatgcagagctgcagaggagcaagtcgcgccactccccggggaccctg
ctggcacctgttcctgactgcagcccaatgaaacgctctgcgtccacccacgccccccag
cgcccccaggaggtgaacctgcatgaacacaccctggagaggcccagcaccgaagaaagg
cgtcaccatcaccgccaccaccaccgctgccaccaccaccgagagagggacaagaagcag
cggtcactggacaggacgccaagcaccattggtgcaccaggtgacccggctgcagagccc
tcgtctagagacagggtgcaggaccgcggccgctcccatgagaggaagaaccactcgacg
gcgggggagaagcagcgctactactcttgcgatcgctacagcagcagggaacactgccac
accaccaaatctgccaccactagctgtgccacctcccccagcgaggtgcaggaacccagc
atcaacaagcagggtagtggttcggttaaaggcagcccagtgatgttgacctcaggggct
atcacacctagccgtggacgcaggcagctcccacagacccccctgaccccccgccccggg
gtgacgttcaagactgcaaactcctcccctgtgcactttgtgtctgcccagtgtggcagc
ggcctgcccaccctgagtcctggccggctgagccgtgggctgtctgagcacaacgccctg
ctgcatagtggcacctctcacatcccctcccccatcacccgcatcagctctgagcccttc
ctgggctacagtcacagtgacccccaaggccagggtgggccgtactgcaacctccgggac
gagctgctgagcccttatggtgccagagcacactcccctcggactgcacgtcctcaaatg
aggccgggggccctccacctgcctccgccaccccagcagagacgtgcggtgcccaacgga
taccacttcacctttggtggtaatggcaacgccagcctgggctctggctctggtgccagg
ccacccaggtactatcacgaggcagaggaggatgaatggtgctag
DBGET
integrated database retrieval system
