Salmo salar (Atlantic salmon): 106585463
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Entry
106585463 CDS
T04363
Symbol
SMD3
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3-like
KO
K11088
small nuclear ribonucleoprotein D3
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106585463 (SMD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106585463 (SMD3)
03041 Spliceosome [BR:
sasa03041
]
106585463 (SMD3)
03032 DNA replication proteins [BR:
sasa03032
]
106585463 (SMD3)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
106585463 (SMD3)
Spliceosome [BR:
sasa03041
]
Complex A
U1 snRNP components
Sm proteins
106585463 (SMD3)
U2 snRNP components
106585463 (SMD3)
Complex B
U1 snRNP components
106585463 (SMD3)
U4/U6.U5 tri-snRNP components
106585463 (SMD3)
Complex C
U2 snRNP components
106585463 (SMD3)
DNA replication proteins [BR:
sasa03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
106585463 (SMD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Kringle
Motif
Other DBs
NCBI-GeneID:
106585463
NCBI-ProteinID:
XP_014027163
UniProt:
B5X939
LinkDB
All DBs
Position
ssa24:24788068..24789718
Genome browser
AA seq
127 aa
AA seq
DB search
MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMANITVTHRDGRVAQLEQ
VYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGAGAGRGKAAILKAQVAARGRGRGGMGRG
NMFPKRR
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgtccattggagtgccaatcaaagtccttcatgaagctgagggccacatcgttacctgc
gagaccaacaccggggaggtgtaccgggggaaactcattgaagctgaggacaacatgaac
tgccagatggccaacatcacagtgactcacagagatggccgtgtagcccagctggagcag
gtgtacatccgaggcagcaagatccgattccttattctaccagacatgctgaagaacgca
ccaatgctaaagagtatgaagaacaagaaccagggagctggagctgggagaggcaaagct
gccattctcaaagcacaagtggctgctaggggtcgaggacgtggagggatgggaagagga
aatatgttcccgaaaagacgataa
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