Salmo salar (Atlantic salmon): 106585516
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Entry
106585516 CDS
T04363
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
106585516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106585516
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106585516
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106585516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-rbx1
WWE_5
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-RING_Vps41
zf-RING_5
zf-ANAPC11
zf_RING_Vps8
PHD_NSD
zf-UDP
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
106585516
NCBI-ProteinID:
XP_014027285
LinkDB
All DBs
Position
ssa24:23353991..23423925
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AA seq
650 aa
AA seq
DB search
MARPGSGVLVSVNGLGYPPQNLARVVVWEWLNEHGRWRPYNVTTCHHIENVLKGDARGTV
VLGQVDAQLAPYVIDLQSMHQFRQDTGTMRPVHRNFYEPSSAPGKGVVWEWENDSGSWTP
YDMEICVTIQNAYEKQHPWLDLTSLGFCYLIDFNSMVQTNRQSQRKRRLRRRMDLAYPLI
MGSIPKSQSWPVGTSSGQPCSCQQCILVNSTRAASNAILASQHRKLYGGATGPSGATGTL
TVVRQSNTFAGTTLWSPTSSAGTNNIQHNNISAGGGQAKAEQVQSLLSSANFPCSPALPS
LPPAHGHSHAHAHSHSHHAIINGQNNLNRPGTQRISMGTARGAIPPGVPPLPVKNLTVSG
PVHPAIAGMTGILMCAAGLPVCLTRAPKPILHPPPINKSDMKPVPGVNGIRRKTKKKHLR
RGKNPEDVVRRYTEKVKVAPDEDCTICRERLVMSSGYEGVKGIKPEVVGKLGKCGHMYHL
LCLVAMYNNGNKDGSLQCPTCKAIYGEKTGTQPPGKMEYHVIPHCLPGYPEAKTIRIVYD
IPAGLQTTEHPNPGRKFSARGFPRHCYLPDNNKGRRVLKLLIMAWDRRLIFTIGTSSTTG
ESDTVVWNEIHHKTEFGSNLTGHGYPDPNYLDNVLTELSAQGVGQDNLKD
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcacggccaggctctggggtgctggtgtcggtcaacgggctggggtacccccctcag
aacctggcccgggtggtggtgtgggagtggctgaatgaacatgggcgctggcggccctac
aacgtgacaacttgccaccacatagagaacgtactgaagggggatgcgcgggggactgtg
gtccttggacaggtggatgcccagcttgccccttacgtcatagacctgcagtccatgcac
cagttcagacaggacacaggcaccatgaggccggtccacaggaacttctatgagccgtca
tcggccccggggaagggtgtggtgtgggagtgggagaacgacagcggctcctggacgccc
tacgacatggagatctgtgtgaccatccagaacgcctatgagaagcagcacccctggctg
gacctgacctctctgggcttctgctacctcattgacttcaacagcatggtccagaccaac
cggcagagccagaggaaacgccgcctgcgccgacgcatggacctggcctaccctctcatc
atgggctccatccccaagtcccagtcttggcccgtgggaaccagctccggccagccctgc
tcctgccagcagtgcatcctggtcaacagcacgcgggctgcctccaatgccatcctggcc
tctcagcaccgtaagctgtatgggggggctacggggccttcaggggctacaggcacgctc
accgtggtacggcagagtaacaccttcgctggaaccaccctctggtcccccacctctagt
gccgggaccaataatatacaacataacaacataagcgcaggaggaggccaagccaaagct
gaacaggtgcagtctctcctgtctagtgccaacttcccatgttccccggcgctgccatcc
cttccgcctgcacatggccactcccacgcccacgcacactcccacagtcaccatgccatc
atcaatgggcagaacaacctgaaccggccgggcacccagcgcatttccatgggcactgcc
agaggagccatcccaccaggggtccctcccctccctgttaagaacctgactgtctctgga
ccagttcacccagcaattgcaggtatgacaggtatcctgatgtgtgcggctggcctgcct
gtgtgtctgaccagggcccctaaacccattctgcacccgccgcccataaacaagagtgac
atgaagcctgtgcctggggtcaacggcatccgccgcaagaccaagaagaagcacctcagg
agagggaaaaacccagaggatgtggtgcggagatacacagagaaagtaaaagtagcccct
gatgaggactgcaccatctgcagggagaggctggtgatgtcatcaggctacgagggtgtt
aagggcataaagccagaggtggtgggcaaacttggcaagtgtgggcacatgtaccatctg
ctgtgcctggttgccatgtacaacaatggcaacaaggatggcagtctgcagtgccccact
tgtaaagctatctatggggagaagacaggcacacagccccctgggaagatggagtaccat
gtcatcccccactgcctgccaggctacccagaggccaagaccatccgcatcgtctatgac
attcctgctggcctacagaccacagagcatcccaacccagggaggaagttcagcgctagg
gggttcccccggcactgctacctcccagacaataacaaaggcaggagggtcctgaagctc
ctgatcatggcgtgggaccgccgcctcatcttcaccatcggcacgtccagcaccacggga
gaatcagacaccgtggtgtggaatgagatccaccacaagacagagtttggctccaacctg
acgggacacggctacccagaccccaactacctggacaacgttctgacagagctgtcagcc
caaggggtgggacaggacaacctgaaggactga
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