Salmo salar (Atlantic salmon): 106585540
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Entry
106585540 CDS
T04363
Name
(RefSeq) LIM/homeobox protein LMX-1.2
KO
K09371
LIM homeobox transcription factor 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106585540
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
106585540
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
TLP-20
Motif
Other DBs
NCBI-GeneID:
106585540
NCBI-ProteinID:
XP_014027337
UniProt:
A0A1S3PI77
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Position
ssa24:21773920..21843474
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AA seq
396 aa
AA seq
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MDIATGPESLEHCFLKRNQSKYPRMLDGIKTEDHPHRQATLGVVLGTECHHQSVCEGCQR
PISDRFLMRVNDSSWHEECLQCAVCQQPLATSCYFRDRKLYCKHDYQQLFATKCSGCLEK
IAPTEFVMRALECVYHLNCFSCCVCDRQLRKGDEFVLKEGQLLCKIDYEKEKDLLSSVSP
DDSDSEKSDDDDVDIKQEKGTGGQGKGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSK
PCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRQQQQQEQQNSQRLGQEVMSNRME
GMMNSFTPLAPPQQQLVAMDQNGYSTDPFQQGLTPPQMPGDHMNPYGNDSIFHDIDSDTS
LTSLSDCFMASSEVNMQARVGPIDRLYSMQNSYFAS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggatattgcaacaggtccggagtcactggaacactgtttcttgaagagaaaccaatcc
aagtacccaaggatgttagacggtataaagactgaagatcatccccatcgtcaagctacc
cttggagtcgtgcttgggacggaatgccatcaccaatctgtatgtgaaggatgccagcgt
ccaatatctgacaggtttctgatgagagtcaacgattcctcgtggcatgaggagtgtttg
cagtgcgctgtgtgtcaacaacctctagctaccagttgttacttccgagataggaaactg
tactgcaaacatgactaccaacaattgtttgccaccaagtgcagtgggtgcctggagaag
atcgcccccacagagtttgtgatgcgtgcactggagtgtgtgtaccacttaaactgcttc
tcctgctgtgtgtgtgaccggcagctgaggaaaggggatgagtttgtcctgaaggagggc
cagctgctgtgtaagattgactatgagaaggagaaggacctgctcagttctgtcagccca
gacgattctgactcagagaaaagcgacgatgacgatgtggatatcaagcaggagaaaggc
acgggaggccaggggaagggagatgatgggaaggaccccaggaggcccaagcggccacgc
accattctgaccactcagcagagacgcgctttcaaagcctccttcgaggtgtcctccaaa
ccctgcagaaaggtgagggagactttggctgctgagacaggtctcagtgttcgtgtggta
caggtgtggtttcaaaaccagagagccaagatgaagaagctggcaagaagacagcagcag
caacaggaacaacagaattctcaacggcttggccaagaggtgatgtccaatcggatggag
ggcatgatgaactccttcacgccactggccccgccccagcagcagctggttgccatggat
cagaacggctacagtacggaccccttccagcagggcctcacccccccacagatgcccgga
gaccacatgaacccatatggtaatgactcaattttccatgatatagacagtgacacatct
ttaaccagcctcagtgactgcttcatggcatcttcggaagtgaatatgcaagcacgtgtg
ggacccattgaccgactctattccatgcagaactcttactttgcatcatga
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