Salmo salar (Atlantic salmon): 106585703
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Entry
106585703 CDS
T04363
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106585703
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sasa03310
]
106585703
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
106585703
Nuclear receptors [BR:
sasa03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
106585703
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF2716
Motif
Other DBs
NCBI-GeneID:
106585703
NCBI-ProteinID:
XP_014027694
UniProt:
A0A1S3PJZ4
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Position
ssa24:30374397..30412484
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AA seq
475 aa
AA seq
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MKTDVVAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAAYSCPRQRNCLIDR
TNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRILNERQQQTCEAE
ALARVYSSSLTNGLSTLNHEIGGTYANGHVIELPKGQVNGGATGGYYHGMDSTQPSPDQS
GLDLAGIKHIKQEPVYDLTPVANLFNYSTYQDSQLAHSNVSMGELDRIAQNIIKSHLETC
QYTADELQQLAWQTHSYDDIKMYQSKTRDVLWQQCAIQITHSIQYVVEFAKRISGFMELC
QNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGCDDLVSAVFDFAK
SLCSLQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNHMDEDALA
KLIGRIPMLSAVCTLHTEELQAFQQLHPETVNVLFPPLYKELFNPDPNAAITMPK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacggatgtcgtagcccaaatcgaagttataccgtgcaaaatctgtggagacaag
tcatcaggaatccactatggggtcatcacgtgtgagggctgcaaagggttcttcagacga
agtcagcagaacaacgctgcatactcctgccctcgccagaggaactgtctgatcgacagg
acaaaccgaaaccgctgccagcactgccgcttacagaagtgtcttgcacttggaatgtcc
agagatgcggtgaagtttggccgcatgtccaagaagcagcgtgacagcctgtacgccgag
gtacagaagcaccagcagcggatcctgaatgagcggcagcagcagacgtgtgaggcagag
gccctggcgcgcgtctactcctccagcctgaccaacggcctcagcaccctcaaccacgag
atcggaggcacctacgccaacggccacgtcatcgagctccccaagggccaggtgaacggt
ggtgccacaggtggctactaccatggtatggactccacccagccctccccggaccagtcg
ggcctggacttggcgggcattaagcacatcaagcaggagccggtgtacgacctgacccct
gtggctaacctgttcaactatagcacctaccaggacagtcagctggcgcacagcaatgtc
agcatgggagagctagatcgtatcgcccagaacattataaagtctcacctggagacctgt
caatacacagcagatgagctgcagcagctggcctggcaaacacactcctacgatgacatc
aagatgtaccagagcaaaacgcgagacgtgctgtggcagcagtgtgccatccagatcacc
cattccatccagtatgtggtggagtttgccaagcgcatctcaggcttcatggagctttgc
cagaacgaccagatcctcctgctcaagtcaggttgtctggaggtggtcctggttagaatg
tgtcgggcgtttaaccctctcaacaacacagtgctgtttgaggggaagtacgggggcatg
cagatgttcaaagcactaggctgtgacgacctggtcagcgctgtgtttgactttgccaag
agtctgtgctctctgcagctcactgaggaggagatcgctctgttctccgcagcagtgctc
atctccacagaccgtccatggctgatggagcccaggaaggtgcaaaagctccaggagaag
atctactttgcgctgcagcacatcatgcagaagaaccacatggacgaggacgcgctggct
aagctgattggtcggatacccatgctgtcggccgtgtgtactctccacacagaggagctg
caggccttccagcagcttcaccccgagacggtgaacgtgctcttccccccgctctacaag
gagctgttcaatcccgaccccaatgcagcgatcaccatgcccaagtga
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