Salmo salar (Atlantic salmon): 106585825
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Entry
106585825 CDS
T04363
Symbol
mex3c
Name
(RefSeq) mex-3 RNA binding family member C
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106585825 (mex3c)
04121 Ubiquitin system [BR:
sasa04121
]
106585825 (mex3c)
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106585825 (mex3c)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106585825 (mex3c)
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106585825 (mex3c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
KH_2
KH_DEAH11_2nd
zf-C3HC4
Prok-RING_4
zf-RING_5
zf-P11
Motif
Other DBs
NCBI-GeneID:
106585825
NCBI-ProteinID:
XP_014027971
UniProt:
A0A1S3PK43
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All DBs
Position
ssa24:38368193..38373117
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AA seq
600 aa
AA seq
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MPSSTSLLETEETEPEIPPLVVHAFADIGLEAHYRQTEQPERLLHSRPVSHFNVLGAVLD
LQPIQHHHPTPTEEDEERANEDVLGEDEFNKTLLVQAQVSGLGSVMLPGMDTPETLLLYN
EFDHGTLQQAQGMMVLPPVYGEPGYEVETSLLMRRKSVNTTECVSVPSSEHVAEIVGRQG
CKIKALRAKTNTYIKTPVRGEQPVFVVTGRKEDVVMAKREILSAAEHFSLIRASRNKAGP
MAAAGPGLPAAPSLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEP
VFEVTGMPENVDRAREEIEAHIAIRTGNCVEIPGDENDFHYNGTDVSFEAGSCGVWLQSN
AATPAGAQRTGNCSVRMTANYRNDSSSSLGSGSTDSYYGGGGNRMADFSPTSPFVNSNNN
VGASFWFEETLLPLASEELAALGSPGFDPLAITTAAPAPQPQVVWSHLEQGVQLLGGRQA
PVRDSQSGTPHLSPAFQEALEHPMAQRVQRVSLSVSESQKFPVYGPTFSSSSDSSSSPPD
SCRGGQECIRCLESEIIAALVPCGHNLFCIECANRICQSPEAICPVCQAPVTQAIRLSLP
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgccaagtagcacatctttgttggagaccgaggaaactgagccggagatcccgccacta
gttgtgcatgcattcgccgacataggcctggaagcccactacagacagacggaacaaccc
gagaggctcttgcattcacgcccggtctctcatttcaatgtgcttggtgctgtgctggac
ctgcagcctatacagcaccaccatccgacaccgacggaagaggacgaagaaagagctaac
gaagacgtgttgggagaggatgagttcaacaagacgctgcttgtgcaggcccaagtctcg
ggactaggctctgttatgctacctggaatggatacgcccgagacactcttgctgtacaat
gagtttgaccacggcacactacaacaggcccagggaatgatggttctaccacctgtgtat
ggagagcctggctatgaagttgagacatcgctgctcatgcggaggaagagtgtgaacaca
accgagtgtgtgtcggtgcccagctcagaacatgttgccgagattgtcggtagacaaggt
tgcaagatcaaggcattgcgagcaaagaccaacacttacatcaagaccccagtgcgaggg
gagcagccggtgttcgtggtgacagggcggaaggaggatgtggtcatggccaagagggag
atcctctcggcagctgagcacttctccctcatccgagcctcccggaacaaggcaggtccg
atggctgcagcagggccagggctacctgctgcaccttccctacctggtcaaaccaccatc
caggtgcgtgttccctaccgcgtggtgggactggtggttgggcccaagggagcgaccatc
aagcgcatccaacagcagacacacacttacattgtcactccaagccgagacaaagagcca
gtgtttgaggtgacgggcatgcctgagaatgtggaccgagcgcgagaggagatcgaggcc
cacattgccatacgcacaggcaactgtgtggagattccaggagacgagaacgacttccac
tacaacggcactgacgtcagcttcgaggcgggaagctgtggggtgtggctgcagtcaaac
gcagccacacctgctggtgcccagcgcaccggcaactgcagtgtgcgcatgaccgccaac
taccgcaacgacagctccagctccctgggcagtggctccactgactcctactatggcgga
ggggggaaccgcatggccgacttcagccccaccagcccctttgtcaacagtaacaacaat
gttggggccagcttctggtttgaggagactctgctccccttggcgtctgaggagctggca
gcactgggatctcctgggtttgaccctctggccatcactacagctgctccggcaccgcag
ccacaggtggtgtggagccacttggaacaaggtgtccagctgttgggtggccgccaggcc
cctgtccgagacagccagtccggcacacctcacctctcccctgccttccaagaggccttg
gaacaccccatggcccagcgggttcaaagggtctccctcagtgtctcagagtctcaaaag
ttcccagtctacggccccaccttctcgtcctccagtgacagctccagctctcccccagac
tcatgcagaggaggccaggaatgcatccgttgcctggagagtgagatcatcgcagccctg
gtgccctgcggacacaacctcttctgcatagaatgcgccaaccgcatctgccagagcccc
gaggccatctgcccagtgtgtcaggcaccagtcacccaggccatacggctgagcctgccc
tga
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