Salmo salar (Atlantic salmon): 106585905
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Entry
106585905 CDS
T04363
Name
(RefSeq) protein HIRA
KO
K11293
protein HIRA/HIR1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106585905
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
106585905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hira
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
EIF3I
Beta-prop_IFT140_1st
WDR55
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
HIRA_B
NBCH_WD40
WDR90_beta-prop_4th
WD40_like
Beta-prop_EIPR1
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
106585905
NCBI-ProteinID:
XP_014028117
UniProt:
A0A1S3PKE6
LinkDB
All DBs
Position
ssa24:41715890..41752734
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AA seq
1040 aa
AA seq
DB search
MKLLKPSWVSHNGKPIFSVDIHPDGTKFATGGQGEDSGKVVIWNMAPVLREEDEKNVNIP
KMLCQMDNHLACVNCVRWSNTGLYLASGGDDKLVMVWKRAAFIGPSTVFGSSSKLANVEQ
WRCVTILRNHTGDVMDVAWSPHDVWLASCSVDNTIVIWNARKFPEIVASLKGHTGLVKGL
TWDPVGKYIASQADDHSLKVWRTMDWQQETNITKPFNECGGTTHVLRLSWSPDGQYLVSA
HAMNNSGPTAQIIERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKQRNGSSPKPSCPYCCC
AVGSKDRSLSVWLTSLKRPLVVIHDLFDKSIMDISWTLNGLGILVCSMDGTVAYLNFSQD
ELGDPLNEDEKNAIHQNIYGKSLAITTEAQLSTTIIENPEMLKYQQERQRAEQANHRMTH
EAQAHKLTSVVNGESLEDIRKNLLKKQVETRTADGRRRITPLCIAQLDTGDFSPALFNSV
PILPGSASQLTSQLSSDSNTATSNLDPLSTPLGGKAPDDAKDSVSGAMAQASSLNTTAMK
SNLLLTTSTKMEPMKALDSRFTERSKVMPGVTISMAGLTPLDRVKDSSTLKELKDETSSD
SEDKMAVVKSPSFTKRKALDVDGGDNQLEKRKALDVDGGDNQVEKRKALDVDGGDNQVEK
RKKGRPRKMDAKMMTPVSHQPFQQATPSSEKEPCCVAAVPVAVLKLPTPTPQKAFTLQVS
MEPPVYLEVENEVSAVSGAKLSQLRCSREGREWDTLLPSRVITAAGSSDVVAVACADRML
SVFSACGRRLLPAILLPAPMSALHCSGFYVMALTACATLSVWDVQKQSAVVKNESLQTIL
SGTECTVSQSLLTQQGVPVIGLSNGKSYCFNSSLETWNLIADKQDSLVQCADFKNCISSQ
DALVSQGPLALTQGHNLNAGRLASRLSSTPHHLQHGMTLVFLENQLASALTLRSSTEYHY
WLLIYARFLVTEGSDYRLRELCKDLLGPVHKSASSAWEPTTLGLRKRDLLRELLPVIGQN
LRFQRLFTEYQDQLELLGNK
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgaagctattgaaaccaagttgggtcagtcacaatgggaaaccaatattttctgttgac
atccatcctgatggaacaaagtttgccacgggtggccagggagaggactctgggaaggtt
gtcatatggaacatggctccagtgctccgagaggaggacgagaagaacgtgaacatcccc
aagatgctctgccagatggacaatcacttagcctgtgtgaactgtgtccgctggtcaaac
accgggctttacctggcctccggaggagatgacaagctggtcatggtgtggaagagagct
gccttcattggaccgagtactgtatttgggtccagcagtaaattggccaacgtggaacag
tggcgctgtgtcaccatactgagaaaccacacaggggatgtcatggatgtggcgtggtcc
cctcacgacgtgtggttagcctcctgcagtgtggacaacaccattgtgatctggaatgct
cgcaaattcccagagatagtggcgtcgctgaagggccacacaggcctggtgaaggggctg
acgtgggaccctgtagggaagtacatcgcctcccaggctgacgaccacagcctgaaggtg
tggaggaccatggactggcagcaggagaccaacatcaccaagcccttcaacgagtgtggg
gggaccacccacgtactgcgcctcagctggtctcccgacggacagtacctggtgtcagcc
cacgctatgaacaactccgggcccaccgctcagatcattgagagggacggctggaagacc
aacatggactttgtgggccaccgcaaggctgtcactgttgtgaaattcaaccccaaaatc
ttcaaaaagaaacagaggaatgggagttctcccaagcccagctgtccctactgctgctgt
gctgtgggaagcaaagaccgctccctctccgtttggctgacgtctctgaagcgccctcta
gtggtgatccacgacctgtttgataaatccatcatggacatctcatggaccctgaatggg
ctgggtatcttggtgtgctccatggacggtacagtggcatacctcaacttctctcaggac
gagctcggggaccccctcaacgaggacgagaagaacgccatccaccagaacatctatggt
aagagcctggccatcaccaccgaggcccaactctccaccaccatcatcgagaacccggag
atgctcaagtaccagcaggagaggcagcgtgcagagcaggccaaccacaggatgacccac
gaggcccaggcccacaaactcaccagcgtggtcaacggagagtccctggaggacatccgc
aagaacctgttgaagaaacaggttgagacgaggaccgcggacggcaggaggaggattact
cctctctgcatcgcccagctcgacacaggggatttctccccagccctcttcaacagcgta
cccatcctccctgggtcggccagccagctcacctcccagctttcctcagactccaacacg
gccacctccaatttggaccccctatccaccccactggggggcaaggccccagatgacgcc
aaagacagtgtttccggtgccatggctcaggcctcgtctcttaacaccacagccatgaag
tccaacctgctcctaaccacctccaccaagatggagccaatgaaagcccttgactccagg
ttcacagagaggtcaaaggtcatgcccggggtcaccatctccatggcaggactcaccccg
ctagacagagttaaagacagcagcactttaaaggagctcaaggatgagacgagcagcgac
agcgaggacaagatggctgtggtgaagtccccctccttcaccaagaggaaggccctagac
gtggacggaggggacaaccagttggagaagaggaaggccctagacgtggacggaggggac
aaccaggtggagaagcggaaggccttagacgtggacggaggggacaaccaggtagagaag
aggaaaaagggacggcccaggaaaatggacgcgaaaatgatgacgcccgtgtcccaccaa
cccttccagcaggctaccccttcatcagagaaggagccttgttgcgtcgctgctgtcccc
gtggctgtcctcaaactgcccactcccacaccgcagaaagcatttactcttcaggtcagt
atggagcccccggtgtacctggaggtggagaatgaggtctctgcagtgtccggagccaaa
ctcagccagctccgctgttccagggagggcagggagtgggacacgttgctgcccagccga
gtcatcactgcagcgggcagcagtgatgttgtggcagtggcgtgcgcagaccgcatgttg
tctgtgttttcggcgtgtggccgccgcctactacccgccatcctgctgcccgcgcccatg
tccgccctgcactgctcaggcttctacgtcatggccttgaccgcctgcgccaccctgtct
gtctgggatgtccaaaaacagagtgctgtagtgaagaatgaatctttgcagaccattcta
tcaggcacagaatgcactgtgtcccagtctttactgacacagcagggggtcccagtcatt
ggcctctccaatgggaagtcttactgcttcaactcctccctggagacatggaacctaata
gcggataaacaggactccctggtgcagtgtgctgacttcaagaactgcatctcctcccag
gatgcacttgtgtcacagggacccctggctctcacacagggacacaacctcaatgcgggt
cgcctggcctccagactgtcgtccaccccccaccacctgcagcatggcatgaccctggtt
ttcctggagaaccagctggcgtcggccctcaccctgcgctccagcacagagtaccactac
tggctgctcatctatgcacgcttcctggtcactgagggctctgattatcggctacgggag
ctctgtaaagacttactgggaccagtgcacaagtctgccagcagtgcctgggagcctaca
accctgggcctgcggaagagggacctgttgagagagctgctgcctgtcataggacagaac
ttgcgtttccagaggctcttcacagagtaccaggaccagctggagctgctcggcaacaaa
tag
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integrated database retrieval system