Salmo salar (Atlantic salmon): 106585916
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Entry
106585916 CDS
T04363
Name
(RefSeq) nipped-B-like protein B
KO
K06672
cohesin loading factor subunit SCC2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106585916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106585916
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
106585916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
HEAT_EZ
Cnd1
Bacillus_HBL
Cnd3
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
106585916
NCBI-ProteinID:
XP_014028133
UniProt:
A0A1S3PKD7
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All DBs
Position
ssa24:complement(42716698..42747207)
Genome browser
AA seq
1583 aa
AA seq
DB search
MGITCRIPSDKLVKVLNILEKNIQDGARLSTLMSHDNGEDEEKLWRDLIMERVTKSADAC
LTALNIMTSAHMPKAVYMEDVIERVLQYTKFHLQNTLYPQYDPVYRVDPHGGGLLSSKAK
RAKCSTHKQRVIVMLYNKVCDMVSNISELLEIQLLTDTTILQISSMGITPFFVESVSELQ
LCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDRDGEPMYIQMVT
ALVLQLIQCVVHLPNDRDAMEDEYDSKVDQDLLITNNYETAMRTAQNFLSVFLKKCGSKQ
GSEEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMTLRVASLDY
LGTVAARLRKDAVTSKMDQRSIDRILKETQGDDETQQLQKALLDYMEENTETDPSLLFAR
KFYIAQWFRDTTIETEKTMKSQKRDREEDSSDGPGHHAKDIETIGEVMQRAEARKKFLRK
IIKTVPSHFTTLRMNSDTVDYDDSCLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVR
TKAMKCLSEVVSVDPSILSRLDMQRGVHGRLMDNSTSVREAAVELLGRFVLSRPQLTEQY
YDMLIERILDTGISVRKRVIKILRDICLEQPTFNKITEMCVRMIRRVNDEEGIKKLVNET
FQKLWFTPTPAHDKDTMTRKILNITDVVAACKDTGYDWFEQLLQNLLKVEEDAAYKPAQK
ACVQLVDNLVEHILKYEESLTESKGVNSTRLVSCITTLFLFSKIRAQLIVKHAMTMQPYL
TTKCNNASDFMVICNVAKILELVIPLMEHPSETFLTTIEEDLMKLIIKYGMTVVQHCVSC
LGAVVNKVTHNYKFVWSCFNRYYGALTKLKTQHQEDPNSTALAANKPALLRSLFTVGALC
RHFEFDMEEFKGITKVVIKEKVLELLLYFTKHEDEEVKTKAIIGLGFLVIMHPSQMFSPE
VKTLYNGILADRSTSVNLKIQVLKNLQTYLQEEDSRMQEADQHWKKLSKQEDLKEMGDIS
SGMSSSIMQLYLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPE
PSMRNKADQQLVEIDKKYTGFIHMKAVAGMKMSYQVQQAIMASRKSIIRGFRHDETTSAL
CAHLFSMVRGNRQHRRAFLISLLNLFDDSSKTDVNMLLFIADNLACFPYQSQEEPLFIMH
HIDITLSVSGSNLLQTFKESLLKEPRRREPKVKKEHQSKNGSGGEEDEDKEEICDSSRSD
DNSNPDDDDEVVRRPKKSKRPVAVEEPSSESDLDLEDLDVEDVDRVMRRLPENSTPLLDF
ANASQGILLLLVLKQHLKNLYSFSDSKIQKYSPTESAKVYDKAVNRKTNVHFKPRQTIDF
LSNNWANVVFTHDIKTRIVKQYLDFKTLMEHLDPDEEDEEGEAAQASANIRNKAINALLG
GAGHGHLAPVEYDEDDESDEDERNPGSSRRARRSGDPGNLNESVDSMDVIAIHCPKHKDR
PQLARVIQKISTGYSVHWMSGSYSGPWADAKKRDGRKTVPWVDTIKESDIIYKKIALTSN
HKLSNKVAQTLRSLYAAKEGTSS
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcacctgcaggataccgtcggataagctggtgaaggtactgaatatcctggag
aaaaacatccaggatggggccaggctctcgacactcatgagccacgacaacggcgaagat
gaggagaagctgtggcgagacctcattatggagcgcgtgaccaagtcagctgacgcctgt
ctgacggccctcaacatcatgacgtccgcccacatgcccaaggccgtatacatggaggac
gtgatcgagagggttctccagtacaccaagttccacctgcagaacaccctctacccccag
tatgaccctgtctatagggtggaccctcacggaggtggcctgctgagctccaaagccaag
cgggccaagtgctccacccacaagcagcgggtcattgtcatgctgtacaacaaggtgtgt
gacatggtcagcaacatctctgagctgctggagattcagctgctcaccgacaccaccatc
ctccagatctcttcaatgggcatcacccctttctttgtggagagtgtcagtgagctgcag
ctgtgtgccatcaagctggtgacagcggtgttctcccgctatgagaagcataggcagctg
attctggaagagatcttcacatctctggccagactgcccaccagcaaacgcagtctccgc
aacttcaggctgaacagcagcgacagggacggcgagcccatgtacatccaaatggttaca
gccctggtgctacagctcattcagtgcgtggtacacctcccaaacgaccgcgacgccatg
gaggacgagtacgacagcaaggtagatcaggacttgctgatcaccaacaactacgagacg
gccatgaggacagcccagaacttcctctcggtgttcctcaaaaagtgtggcagtaagcag
ggcagcgaggaggactacaggcctctgtttgagaactttgtccaggacctgctctccacg
gttaacaagccagagtggcccgctgccgagctactgttgagcctgttaggcagactgctg
gtgcaccagtttagtaacaagcagacggagatgacccttagggttgcctccctggactat
ctaggcacggtggccgctcgcctgcgcaaagatgccgtcaccagcaagatggaccagcga
tccattgaccgcatcctgaaagagacccaaggtgacgacgagacccagcaactgcagaaa
gcccttctggactacatggaggagaacacagagactgacccttcactattgtttgccagg
aagttctacatagcacagtggtttcgcgacaccaccatagagacagagaagaccatgaag
agccagaaacgggaccgggaagaggactcgtcggacggccctggtcaccacgccaaggac
atcgagaccattggggaggtcatgcagcgggccgaggcgcgcaagaagttcctccgcaag
atcataaagacggtcccctcccatttcaccaccctgagaatgaactctgacacggtggac
tacgacgactcctgcctcatcgtccgctacttagcctccatgaggccgttcgcccagagc
tttgatatttacttaacccagatcttgcgagtcctgggggagagtgcaatcgctgtccgg
acaaaagccatgaaatgtctgtctgaggtggtttctgtagaccctagcattctttccagg
ttggacatgcagcgcggggtgcatggccgtctgatggacaactccaccagcgtgcgcgag
gcggccgtggagcttctgggccgcttcgtgctgagccgtccccagctcaccgagcagtac
tacgacatgcttatcgagaggatactggacacgggcatcagcgtgaggaagagggtgatt
aagatcctgagagacatctgtctggagcagcccaccttcaacaagattacagagatgtgt
gtgaggatgatccgtcgggtcaacgacgaggagggcattaagaaactagtcaacgaaaca
ttccagaagctgtggttcaccccgaccccggcccacgacaaagacactatgaccaggaag
attctcaacattaccgacgtggtcgcggcatgcaaagacacgggctacgattggtttgag
caactccttcaaaatctgttgaaagtggaggaagacgctgcctacaaaccggcccagaag
gcttgtgtgcagctcgtggacaatcttgtggagcacatcctcaaatacgaggagtctctt
acagaaagtaaaggggtgaactcaacccgcctggtgtcctgcatcacaactctcttcctg
ttcagcaagatccgggctcagctcatcgtcaaacacgccatgaccatgcaaccctacctg
accaccaagtgcaataacgccagcgacttcatggtgatctgtaacgtggccaagatcctg
gagttggtgatccctctgatggagcacccttctgagaccttcctcaccaccatcgaggaa
gacctcatgaaactcatcatcaaatatggcatgacggttgtccaacactgtgtcagctgc
ctcggcgccgtggtcaacaaggtgacccacaactataagtttgtgtggtcttgctttaac
agatactacggtgctctgaccaagctgaagacgcagcaccaggaagatcccaacagtaca
gctctggctgccaacaagccagccctcctgcgctccctcttcaccgtgggagccttgtgt
cgccactttgagttcgacatggaggagttcaagggcatcaccaaggtggtgatcaaagag
aaggtgttggagctgctgctctactttaccaaacatgaggacgaggaggtgaagaccaag
gctatcatcggcttaggcttcctggtgatcatgcaccctagccagatgttttccccggag
gtgaagaccctgtacaacggcatcctggccgacaggagcacctcggtcaacttgaagatc
caggtgttgaagaacctgcagacctatctgcaggaggaggactcgcgcatgcaggaggcg
gaccagcactggaagaagctgtccaagcaggaggacctgaaggagatgggggacatctcg
tcgggcatgagcagttccatcatgcagctgtacctcaagcaggtgctggaagccttcttc
cacacccagtccagcgtgcgccactttgccctcaacgtcatcgcactcaccctcaaccag
ggcctcatccaccctgtacagtgtgtaccatacctcatcgccatgggaacggaccccgag
cccagtatgagaaacaaagcggaccagcagttggtggagatcgacaagaagtacaccgga
ttcattcacatgaaggcagtggctgggatgaagatgtcctaccaggtgcagcaggccatc
atggcgtcccgcaagagcatcatccgaggcttccggcacgacgagaccacctcggccctc
tgcgcccacctcttctccatggtccgagggaaccggcagcatcggcgagccttcctcatc
tccctgctcaacctgtttgatgacagctccaagactgacgtgaacatgctgctgttcata
gctgacaacctggcctgtttcccctaccagagccaggaggaacccctcttcattatgcac
cacatagacatcacactgtctgtgtctggcagcaacctgctgcagaccttcaaagagtct
ctgttgaaggagccgcggcgccgcgagcccaaagttaaaaaggagcaccagtcaaagaac
ggctctggcggggaggaggacgaggacaaggaggagatctgtgactcctcgaggagtgat
gacaactcaaaccctgatgatgatgatgaggtggtgcggcggcctaagaagtccaagagg
cctgtggctgtggaggaacccagctctgagtcggatttagacctggaagacctggacgtg
gaagatgtggaccgggtgatgcggcgactgcctgagaactccacgccgctcctggacttt
gccaacgcctcgcagggcatcctgctgctcctcgtgctcaaacaacacctcaagaacctt
tacagcttctcagacagcaaaatccagaagtactcaccgactgagtcggccaaagtgtac
gacaaggcggtgaacaggaagaccaacgtccacttcaagccccgacagaccatcgacttc
ctgtccaacaactgggccaacgtggtgttcactcacgatatcaagacgaggatagtcaag
cagtacctggatttcaaaaccctgatggaacacttggacccagatgaggaggacgaggag
ggcgaggcagcacaggccagcgccaacatccggaacaaagccataaacgcactgcttgga
ggggccggccacgggcatcttgcaccagtagagtacgatgaggatgacgagagtgacgaa
gatgagagaaaccctgggtcctctcggcgggcgagacgttcaggggaccccgggaacctc
aacgagagcgtggactctatggacgtcatcgccatccattgccccaagcacaaggaccgt
ccgcagctcgcccgggtcatccagaagatcagcacaggctacagcgtgcactggatgtcc
ggctcctactctggcccctgggccgacgccaagaaacgggacggacgcaaaacggtgcct
tgggtggacactattaaggagtctgacataatttacaaaaaaatcgccttgaccagtaac
cacaaactgagtaacaaagtggcgcagactttacggtcactgtacgctgccaaggagggg
acttccagttaa
DBGET
integrated database retrieval system