Salmo salar (Atlantic salmon): 106585921
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Entry
106585921 CDS
T04363
Name
(RefSeq) nipped-B-like protein A
KO
K06672
cohesin loading factor subunit SCC2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106585921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106585921
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
106585921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
HEAT_EZ
Cnd1
Cnd3
Bacillus_HBL
Motif
Other DBs
NCBI-GeneID:
106585921
NCBI-ProteinID:
XP_014028139
UniProt:
A0A1S3PLC4
LinkDB
All DBs
Position
ssa24:43051028..43066486
Genome browser
AA seq
2064 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRIAEEVNCLLACRDEN
LVSQLAHGLNQVSTEHIELKDNLGSDEPEGDVPVLLQTVLSRNPGIFREKNVMQQPMVQQ
YKPIQNSMHGSPAQSANFQQASMSPNPSNRGFVSPQSSSGSRFVPQQNSPVPSPYTPQSP
AGFMQYPHPPSYNQHQQIQQASPMVPGGMRNIHESKGPMTNAAHHHSDRQEDYMSIVQRL
GNEESDPSMRNASFPLRSPQPGCSPVGNEGTPKAGSRPPLILQSPPPYMSPREGPPDLLL
ESPDQRKKQQKKKLVGKEDKDAYDIVTSPSKDTTKLTLSLSRVKSEEVEDPSGELLPVMM
DQNSDLEGELGYQQVPVLQNVGVIKGQEGPLSSPFDEAELDALAEIERIERESASERERC
SKEVQDKDKPLKKRKQDSFPLEPGAGGTAGTTGAPGSGGGGNAGKLIPQEATAAGNGASR
PALMVSIDLQQAGRADGQLDPCMAAPIPALEAQRWPEEPAEGPAAEGSDTAGVLRLKADD
RPEVIKNSMDKHDNHREPSRHRHDGKQDRRPDTPKSSSREHGRDRDRERRHRNEDKRSPE
ERYRPDSPRVKQEGRGGGFDPSGRPRSDRPGFRSPSGGETARNRPDGHKQLQPESKSGEF
PAYLLGGQGSGGLKNFVIPKMKRDGGAVEVAEGWGQPRVKLERLGVRGLVDHISKRPKPV
VVLQKLSFDEVQRIIRVKDRHGSKSGKNRLLSGRSGKGGLDQSVLEELPPELLAEMESTM
PLCERVKMNKRKRSTVKEKPKYTEVDSDDDSNGESARKRQRKNRGDKAWEYEPERERRGS
GDHRRSKGFQEGRRGSGSCYRDSSDEESPPPSMSDIARQMKKKENQKKRKAYEPKLTHQE
LMDSSTFKRFSSSVDNILENLEDVDFTQMDDDEIPQELLLGKQQLNELGSESAKIKAMGI
TCRIPSDKLVKVLNILEKNIQDGARLSTLMSHDNGEDEEKLWRDLIMERVTKSADACLTA
LNIMTSAHMPKAVYMEDVIERVLQYTKFHLQNTLYPQYDPVYRVDPHGGGLLSSKAKRAK
CSTHKQRVIVMLYNKVCDMVSNISELLEIQLLTDTTILQISSMGITPFFVESVSELQLCA
IKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDRDGEPMYIQMVTALV
LQLIQCVVHLPNDRDAMEDEYDSKVDQDLLITNNYETAMRTAQNFLSVFLKKCGSKQGSE
EDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMTLRVASLDYLGT
VAARLRKDAVTSKMDQRSIDRILKETQGDDETQQLQKALLDYMEENTETDPSLLFARKFY
IAQWFRDTTIETEKTMKSQKRDREEDSSDGPGHHAKDIETIGEVMQRAEARKKFLRKIIK
TVPSHFTTLRMNSDTVDYDDSCLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKA
MKCLSEVVSVDPSILSRLDMQRGVHGRLMDNSTSVREAAVELLGRFVLSRPQLTEQYYDM
LIERILDTGISVRKRVIKILRDICLEQPTFNKITEMCVRMIRRVNDEEGIKKLVNETFQK
LWFTPTPAHDKDTMTRKILNITDVVAACKDTGYDWFEQLLQNLLKVEEDAAYKPAQKACV
QLVDNLVEHILKYEESLTESKGVNSTRLVSCITTLFLFSKIRAQLIVKHAMTMQPYLTTK
CNNASDFMVICNVAKILELVIPLMEHPSETFLTTIEEDLMKLIIKYGMTVVQHCVSCLGA
VVNKVTHNYKFVWSCFNRYYGALTKLKTQHQEDPNSTALAANKPALLRSLFTVGALCRHF
EFDMEEFKGITKVVIKEKVLELLLYFTKHEDEEVKTKAIIGLGFLVIMHPSQMFSPEVKT
LYNGILADRSTSVNLKIQVLKNLQTYLQEEDSRMQEADQHWKKLSKQEDLKEMGDISSGM
SSSIMQLYLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPSM
RNKADQQLVEIDKKYTGFIHMKAV
NT seq
6191 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcaccactctcgctgggattgctagccttaca
gacttgttgaatcagctgcccctgccctctcctctcccagccaccaccaccaaaagcctg
ctctacaatgggaggatcgcagaggaggtcaactgcctgctggcctgccgggacgagaac
ctggtctcccagctggcccacggtcttaaccaggtttccacagagcacatagagctgaag
gacaacctgggcagtgatgagccagagggtgacgtgccggtgctgctgcagacggtgctg
tccaggaaccctggcatcttcagggagaaaaatgtcatgcagcagccgatggtgcaacag
tacaaaccaatacagaattccatgcatggcagcccagcccagtcagcaaactttcagcag
gcttcaatgtctcctaatccatccaaccggggatttgtctccccacagtcgagctcaggg
agtcggttcgtcccccagcagaacagccctgtgcccagcccgtacactccccagagccca
gctgggttcatgcagtacccccacccgcccagctacaatcagcaccaacagatacagcaa
gccagccccatggtccctgggggcatgaggaacatccatgagagcaagggaccgatgacc
aacgctgcccaccaccactcagacagacaggaggactacatgagtatagtccagagactg
gggaacgaggagagtgacccctccatgagaaacgcctcattccctctgaggtcgcctcag
cctgggtgctcgcccgtgggaaacgaaggaacacccaaagctggttctaggccgccgctc
atccttcagtctcctccgccgtacatgtctccccgggaaggccctccggacttgctactg
gagtctcccgaccagaggaagaaacagcagaagaagaagctggtgggcaaagaggacaag
gatgcgtacgacatcgtcacctcgccctccaaggacaccaccaagctgacgctgtcgctg
tcacgggtcaagtcggaggaggtggaggacccctctggtgagctgctgccagtcatgatg
gatcagaactctgacctagagggcgagcttggctaccagcaggtccctgtgctgcagaac
gtgggggttattaaagggcaggagggccctctctcatcgccttttgatgaggcggagcta
gacgccctggcggagattgagaggatagagcgtgagtcagccagtgagagggagcgctgc
tccaaagaggtgcaggataaagacaagcccctgaagaagcgaaagcaagactcgtttcca
ctggagcccggagcagggggcaccgcaggcaccaccggtgcgccaggcagcggaggaggg
ggcaatgcaggcaaactgatcccccaggaggctacagcagcaggaaacggagctagcaga
ccagccctcatggtcagcatcgacctgcaacaggcgggccgggccgacggccagcttgac
ccttgcatggcagctcccatcccggccctggaggcacaacgctggcccgaggagcctgcc
gagggccctgcagccgagggatctgacacagccggggtgctccggctcaaagccgacgat
cgacccgaggtcatcaagaacagcatggacaaacacgacaaccaccgtgagccatccagg
caccggcatgacggaaagcaagaccggcgccctgacacacctaagtcatcgagcagagag
cacgggcgggacagagaccgggagaggcggcacaggaatgaagacaagcgctcgccagag
gagcgctaccggccggacagccccagggtcaagcaggagggccgaggaggtggttttgac
cccagcgggcgacctcgcagcgacagacccggcttcaggtcccccagcggaggagagact
gccagaaaccgcccagatggacacaaacagctacagcctgagagcaagtcaggagagttc
cctgcttacctgctgggggggcaagggtctgggggtctgaagaactttgtgatccccaag
atgaagcgggacggcggagctgtggaggtggcagaaggctggggccagccccgggtcaag
ctggagcggctgggggttcgggggctagtggaccacataagtaagaggcccaagcctgtc
gtggtgctgcagaagctctcttttgatgaggtgcagaggatcatcagggttaaggaccgt
cacggctccaagtctggcaagaacaggctcctctcaggaaggtcaggcaaaggtggacta
gaccagtcggtgctggaagagcttcctcctgaactgttggcggagatggagtccaccatg
ccgctgtgcgagagggtgaagatgaacaagcgtaagcggagtacggtcaaagagaagccc
aagtacacagaggtcgactcggacgacgattccaacggggaatctgccaggaagcgccag
aggaagaaccggggggacaaggcctgggagtatgagccagagcgggagaggaggggctct
ggggaccataggcggagtaaggggttccaggagggacgcagaggctcaggcagctgctac
cgggactcttctgatgaggagtcgcccccacccagcatgagtgacattgccaggcagatg
aagaaaaaagagaatcagaaaaagaggaaagcctatgagcccaagctcactcaccaggaa
ctgatggactcgtccacattcaaaagattctcctccagcgttgacaacatcctagagaat
ctggaggatgtggacttcacgcaaatggacgacgatgagatcccacaggagctgctgctg
ggtaaacagcagctgaacgagctgggcagtgagtcggccaagatcaaggccatgggcatc
acctgcaggataccgtcggataagctggtgaaggtactgaatatcctggagaaaaacatc
caggatggggccaggctctcgacactcatgagccacgacaacggcgaagatgaggagaag
ctgtggcgagacctcattatggagcgcgtgaccaagtcagctgacgcctgtctgacggcc
ctcaacatcatgacgtccgcccacatgcccaaggccgtatacatggaggacgtgatcgag
agggttctccagtacaccaagttccacctgcagaacaccctctacccccagtatgaccct
gtctatagggtggaccctcacggaggtggcctgctgagctccaaagccaagcgggccaag
tgctccacccacaagcagcgggtcattgtcatgctgtacaacaaggtgtgtgacatggtc
agcaacatctctgagctgctggagattcagctgctcaccgacaccaccatcctccagatc
tcttcaatgggcatcacccctttctttgtggagagtgtcagtgagctgcagctgtgtgcc
atcaagctggtgacagcggtgttctcccgctatgagaagcataggcagctgattctggaa
gagatcttcacatctctggccagactgcccaccagcaaacgcagtctccgcaacttcagg
ctgaacagcagcgacagggacggcgagcccatgtacatccaaatggttacagccctggtg
ctacagctcattcagtgcgtggtacacctcccaaacgaccgcgacgccatggaggacgag
tacgacagcaaggtagatcaggacttgctgatcaccaacaactacgagacggccatgagg
acagcccagaacttcctctcggtgttcctcaaaaagtgtggcagtaagcagggcagcgag
gaggactacaggcctctgtttgagaactttgtccaggacctgctctccacggttaacaag
ccagagtggcccgctgccgagctactgttgagcctgttaggcagactgctggtgcaccag
tttagtaacaagcagacggagatgaccctgagggttgcctccctggactatctaggcacg
gtggccgctcgcctgcgcaaagatgccgtcaccagcaagatggaccagcgatccattgac
cgcatcctgaaagagacccaaggtgacgacgagacccagcaactgcagaaagcccttctg
gactacatggaggagaacacagagactgacccttcactattgtttgccaggaagttctac
atagcacagtggtttcgcgacaccaccatagagacagagaagaccatgaagagccagaaa
cgggaccgggaagaggactcgtcggacggccctggtcaccatgccaaggacatcgagacc
attggggaggtcatgcagcgggccgaggcgcgcaagaagttcctccgcaagatcataaag
acggtcccctcccatttcaccaccctgagaatgaactctgacacggtggactacgacgac
tcctgcctcatcgtccgctacttagcctccatgaggccgttcgcccagagctttgatatt
tacttaacccagatcttgcgagtcctgggggagagtgcaatcgctgtccggacaaaagcc
atgaaatgtctgtctgaggtggtttctgtagaccctagcattctttccaggttggacatg
cagcgcggggtgcatggccgtctgatggacaactccaccagcgtgcgcgaggcggccgtg
gagcttctgggccgcttcgtgctgagccgtccccagctcaccgagcagtactacgacatg
cttatcgagaggatactggacacgggcatcagcgtgaggaagagggtgattaagatcctg
agagacatctgtctggagcagcccaccttcaacaagattacagagatgtgtgtgaggatg
atccgtcgggtcaacgacgaggagggcattaagaaactagtcaacgaaacattccagaag
ctgtggttcaccccgaccccggcccacgacaaagacactatgaccaggaagattctcaac
attaccgacgtggtcgcggcatgcaaagacacgggctacgattggtttgagcaactcctt
caaaatctgttgaaagtggaggaagacgctgcctacaaaccggcccagaaggcttgtgtg
cagctcgtggacaatcttgtggagcacatcctcaaatacgaggagtctcttacagaaagt
aaaggggtgaactcaacccgcctggtgtcctgcatcacaactctcttcctgttcagcaag
atccgggctcagctcatcgtcaaacacgccatgaccatgcaaccctacctgaccaccaag
tgcaataacgccagcgacttcatggtgatctgtaacgtggccaagatcctggagttggtg
atccctctgatggagcacccttctgagaccttcctcaccaccatcgaggaagacctcatg
aaactcatcatcaaatatggcatgacggttgtccaacactgtgtcagctgcctcggcgcc
gtggtcaacaaggtgacccacaactataagtttgtgtggtcttgctttaacagatactac
ggtgctctgaccaagctgaagacgcagcaccaggaagatcccaacagtacagctctggct
gccaacaagccagccctcctgcgctccctcttcaccgtgggagccttgtgtcgccacttt
gagttcgacatggaggagttcaagggcatcaccaaggtggtgatcaaagagaaggtgttg
gagctgctgctctactttaccaaacatgaggacgaggaggtgaagaccaaggctatcatc
ggcttaggcttcctggtgatcatgcaccctagccagatgttttccccggaggtgaagacc
ctgtacaacggcatcctggccgacaggagcacctcggtcaacttgaagatccaggtgttg
aagaacctgcagacctatctgcaggaggaggactcgcgcatgcaggaggcggaccagcac
tggaagaagctgtccaagcaggaggacctgaaggagatgggggacatctcgtcgggcatg
agcagttccatcatgcagctgtacctcaagcaggtgctggaagccttcttccacacccag
tccagcgtgcgccactttgccctcaacgtcatcgcactcaccctcaaccagggcctcatc
caccctgtacagtgtgtaccatacctcatcgccatgggaacggaccccgagcccagtatg
agaaacaaagcggaccagcagttggtggagatcgacaagaagtacaccggattcattcac
atgaaggcagt
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integrated database retrieval system