Salmo salar (Atlantic salmon): 106585991
Help
Entry
106585991 CDS
T04363
Name
(RefSeq) transducin-like enhancer protein 4
KO
K04497
groucho
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04310
Wnt signaling pathway
sasa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
106585991
04330 Notch signaling pathway
106585991
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
106585991
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
ADF / Cofilin
SCMC complex
106585991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
Beta-prop_IP5PC_F
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
106585991
NCBI-ProteinID:
XP_014028225
UniProt:
A0A1S3PKN1
LinkDB
All DBs
Position
ssa24:47516172..47569657
Genome browser
AA seq
508 aa
AA seq
DB search
MARRGRSPSPDSVVRGMYKYTDPASPRGSPTQSPRENRLDKSRLLKKEVPPLSPASMASS
SSTPSNKSKDVITNEKSSTSTPGLRGKTSGLEGPGLRPLGLPCPYPGAFGMMPHPSLNGL
NGDLGGASAYASLHNLSPQISAAAAAAVAAYGRSQVVGFDPHHHMRVPGLPPNLSGIPGG
KPAYSFHVSTEGQMQPVPFPPDALIGPGIPRHARQINTLSHGEVVCAVTISNPTRHVYTG
GKGCVKIWDISQPGSKSPVSQLDCLNRDSYIRSCRLLHDGRTLIIGGEASTLSIWDLASP
TPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCI
DISHDGTKLWTGGLDNTVRSWDLREGRQLRQHDFTSQIFSLGYCPTGEWLAVGMENSNVE
VLHVTKPEKYQLHLHESCVLSLRFAHCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSV
LSCDISGDDKYIVTGSGDKKATVYEVIY
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtaggggcaggagcccatctcctgattctgtagtgcgaggcatgtacaagtac
accgatcctgcctctcctagaggaagcccaactcagtcccctcgtgagaaccgattggat
aagagccgtctgctgaagaaggaagtccctcccctcagccccgcctctatggcctcgtct
agtagtacgccctccaacaagtccaaagacgtcatcacgaatgagaagtccagcacctcc
acccccggcctgagagggaaaacatcaggactagagggccctggtctgcgtcccctgggg
ttgccgtgtccttacccgggtgcgtttggcatgatgcctcacccaagtctcaacgggctg
aacggcgacctgggcggagccagcgcctacgcctcccttcacaacctgtctcctcagata
agtgcggctgctgcggctgcagttgcggcctacggacgatcacaagtggttggttttgac
ccccaccaccacatgagggtccctggtcttcctcccaacctctctggcattcctggagga
aaaccagcctattccttccacgtgagtactgagggccagatgcagccggtgccgttccct
ccggacgccctgataggcccggggatcccacgtcacgcccgtcagatcaacacgctgagc
cacggcgaggtggtgtgtgccgtcactatctccaatccaaccagacacgtctacacagga
gggaagggctgtgtcaagatctgggatatcagccagcccggcagcaagagtcctgtctct
caactagactgtctgaacagagacagctacatccgttcatgccggctgctgcatgatggg
aggactctgatcatagggggcgaggcctccacactttcaatctgggacctagcctcaccc
accccgcgtatcaaggcagagctaacgtcttccgccccggcctgctacgccctcgccatc
tcccccgacgccaaagtctgcttctcctgctgcagcgacgggaacatcgccgtctgggac
ctccacaaccagacactggtcaggcagttccagggccatacagacggggctagctgtata
gatatctctcacgacggaaccaagctgtggaccggaggtctggacaacaccgtccgctcc
tgggacctgagagagggacggcaactacgtcaacacgacttcacctcacagatcttctct
ctagggtactgtcctacaggggagtggttagctgtagggatggagaacagtaatgtagaa
gtcctccacgtcaccaagccagagaaataccagctacatctccacgagagctgtgtcctc
tccctcaggttcgctcactgtggtaaatggtttgtgagtaccgggaaagacaacctgctg
aacgcttggagaacaccttacggagccagcatattccagtctaaggagtcatcctcagtg
ctaagctgtgatatctctggggatgacaagtacattgtgactggttctggagacaagaag
gcgaccgtctatgaggtcatctactag
DBGET
integrated database retrieval system
