Salmo salar (Atlantic salmon): 106586229
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Entry
106586229 CDS
T04363
Name
(RefSeq) integrin alpha-6-like
KO
K06485
integrin alpha 6
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
sasa04514
Cell adhesion molecules
sasa04810
Regulation of actin cytoskeleton
sasa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106586229
04514 Cell adhesion molecules
106586229
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106586229
09142 Cell motility
04820 Cytoskeleton in muscle cells
106586229
04810 Regulation of actin cytoskeleton
106586229
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106586229
04515 Cell adhesion molecules [BR:
sasa04515
]
106586229
04090 CD molecules [BR:
sasa04090
]
106586229
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106586229
Exosomal proteins of breast milk
106586229
Cell adhesion molecules [BR:
sasa04515
]
Integrins
Integrin alpha subunits
106586229
CD molecules [BR:
sasa04090
]
Proteins
106586229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
106586229
NCBI-ProteinID:
XP_014028746
UniProt:
A0A1S3PMB9
LinkDB
All DBs
Position
ssa25:14429298..14452126
Genome browser
AA seq
1093 aa
AA seq
DB search
MVLPRRYFPIHVALFCWLEWTHISAFNLDTLNVLRKDGEPGSLFGFSLAMHRQFIPSDKR
ILLIGAPRAKALANQRANITGGLYSCDITTESDDCDRIDFDNEEDVRVENKENQWMGVTV
NSQGPGGKIVTCAHRYQRRLFVDTAQESRDITGRCYVLSQDLTIDTSSDEDGGNWKFCEG
RARGHEMFGSCQQGLAATFTKDYHYVVFGAPGAYNWKGIVRVEQKNNTLLEKGFYDDGPY
EVGDENRLDPDLVPVPANSYLGFSLDSGFSITKGRGLTIVSGAPRANHCGAVVLLRKENE
ASARLSPEYILEGPGLASSFGYDVAVVDLNGDGWQDIVVGAPQFFMKEGDIGGAVYVYIN
QAGKWAKITPIRLNGTKDSMFGLAVENIGDINQDSYQDIAVGAPYADAGAGKVYIYHGSA
NGINTMPAQILEGKPNNIRLFGYSLAGNMDLDKNSYPDIAIGSLSDTVLVYRARPIISIK
KDVKITPKEIDFTKKTCGNSICLTVEACFTYKANPASYSPKLTIRYEFEAEADRRKQGLI
SRVLFLNKSHTDQDFQSTGNLDLRGQNKRACTKTKIRLQDNIRDKLRGIPIEVSVGILAT
KRQKRQNALPQLVPILDNSQPSKVVTEVNFLKEGCGNDNICQSNLQLEYRFCSKEPNQEV
FPPLQMQNGLPVISLSDQKDIALEVTVRNRNGDDAHEAKLVGMFPNALSFSGFRSQKTTR
DKPVLCLANQNGSQTECELGNPFKTDSEVTFYIILSTAGISLNTTEIDIDLELQTTSTQD
KTGSVKARAKVVIEMLLSVAGIARPSQVYFGGDVKGESAIKTEEEIGSLIDYEFRIINLG
KPLKSFGTATLNIQWPKENVDGKWLLYLVKISTTGLEEIPCSPETEINSLKHVQESSTSR
KKREAGGKKSGGKISLSDQRKHKILMCGNGYDARCVVIKCPLLGLDSSAVISLRSRLWNA
TFLENYASLNYLDIIVKASISLDAPAKNMVLRNAETQVRVTVFPEKAVAQFGGVPWWIIL
VAVLAGILMLALLVFLLWKCGFFKRSQHDDSVPRYHAVRIKKEACQFKDGKAKMDSFEKK
QWMTSWNENESYS
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggttctcccgagaagatattttccaattcatgtggcacttttttgttggctagaatgg
actcatatatcagccttcaacctggataccttgaatgtgctgaggaaagacggtgaaccg
ggcagtttatttgggttctctctagccatgcaccggcaatttattccttcagataagaga
atactgttgattggagcaccaagagccaaagctctggccaaccagagagccaacataacc
ggaggcctgtacagttgtgacatcaccacagaatccgatgactgcgatcgcatcgatttt
gacaatgaagaggatgtgagagttgagaacaaggagaaccagtggatgggggtgacagtt
aacagccagggccccggagggaagattgtgacctgtgctcatcgctaccagagacgtctg
tttgtggacactgctcaggagtcccgtgacatcacaggccgctgctacgtcctgagtcag
gacctcactattgatacgtcctctgatgaagacggagggaactggaagttctgtgaggga
cgtgccagaggccatgagatgtttggctcatgccagcagggtctggctgccacgttcacc
aaggactaccactacgtggtgtttggagcgcctggcgcctacaactggaaaggcattgta
cgtgtagagcaaaagaacaacactttgttggaaaagggattttatgatgatgggccttat
gaagttggagatgagaaccgcttggatcctgacctggtgcctgtgcctgctaacagctac
ctaggattttcccttgattctggctttagcatcaccaaggggcgtggcctaactattgtg
tctggggcaccacgagccaatcactgtggggctgtggtcctgttgcgaaaagagaatgaa
gcgtcggcaagactctccccagagtacattctagaagggcctggactggcatcgtctttt
ggatatgatgtagctgtggtcgacctgaatggagatgggtggcaggatattgttgtggga
gcccctcagttcttcatgaaagagggagacattggaggagctgtttatgtctacatcaac
caggcaggaaagtgggccaagatcaccccaatccgcctcaatggaaccaaagactcaatg
tttgggctggcagtggaaaacatcggtgacatcaatcaggactcctatcaagacattgcc
gttggagcgccctacgctgacgctggtgcaggaaaagtgtacatttaccatggttctgct
aatggaatcaacaccatgcctgcacagatccttgagggaaagcccaacaacatcagatta
tttggatattctctggctgggaacatggatttagataagaattcctatcctgatatagcc
attgggtcgctctcagatacagttctcgtttacagggcaaggccaattattagtatcaag
aaggatgtcaaaattactccgaaggaaattgacttcacaaagaaaacctgtggcaacagt
atctgtttgaccgtggaagcatgcttcacctataaagcaaaccctgcatcatacagccca
aaactaactatccgctatgaatttgaggctgaagcagatcgcaggaagcaagggctgatc
tctagggtcttgtttctgaacaagtctcacaccgatcaggacttccagtccaccggaaat
ctggacctccggggacaaaacaaaagagcgtgtaccaagacaaaaatcagactgcaggat
aacattagggacaagctgcgtggtattcccattgaggtgtcagtggggatcctggccacc
aagcggcagaagaggcagaacgctctcccccagcttgtgcctattcttgacaactcccag
ccaagcaaggtcgtcactgaggtgaacttcttaaaggagggatgtggaaatgataatatt
tgccagagtaacttacaactggagtacagattctgctccaaagagcccaaccaagaggta
ttccctccattacagatgcagaatgggctaccagtgatctccctcagtgatcagaaggac
atagctctggaggtgacagtgaggaacagaaatggggatgatgcccatgaggctaagctg
gtggggatgttccctaacgctctctcattctccggctttcgctctcagaaaactacgagg
gacaaaccggtgctttgtttagccaatcagaatggctcccagacagagtgtgaactgggg
aatccattcaaaacagattcagaggttactttctacataatcttgagcactgctggtatc
tctctcaatactacagaaatcgacattgaccttgagcttcaaacgaccagtacacaggac
aaaacgggcagtgtgaaagcaagggcaaaagtagtgattgagatgttactttctgttgca
ggaattgcgagaccctcccaggtgtattttgggggcgatgtgaaaggagagagtgccatc
aagacagaagaggagattggcagtttgatcgattatgaatttaggataatcaatttgggt
aagccgttgaagtcctttggcacagccacgttaaacatccagtggcccaaagagaatgtg
gatgggaagtggctgttatatctggttaagatcagcaccactggcctggaagagatcccc
tgctccccagagactgagatcaactctctcaaacacgttcaggagtctagcacatctagg
aaaaagcgtgaagctggaggcaaaaaatctggaggcaaaatctctttatcagaccaaaga
aagcacaagattttgatgtgtggcaatggctacgacgctagatgtgtggtgatcaagtgc
cctctactgggcttggacagtagtgcagtgatttctctaaggtcccgtctgtggaacgcg
accttccttgagaattacgcgtctttgaactatcttgatataattgtgaaagcttccatc
agccttgatgcacctgcaaagaatatggttctcaggaatgctgagactcaggtgagagtc
acagtgtttccagagaaggcggtagcccagtttggtggagtcccatggtggatcatcctt
gtggctgtcctggctggtattctgatgttggcgttgctggtgtttctactctggaagtgt
ggatttttcaaacgctcacaacatgatgacagcgttccaagataccatgccgtacggata
aagaaggaggcttgtcagtttaaagacggaaaagccaagatggattcctttgagaaaaag
cagtggatgacaagctggaatgagaacgagagctactcatga
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