Salmo salar (Atlantic salmon): 106586369
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Entry
106586369 CDS
T04363
Symbol
CH60
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106586369 (CH60)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106586369 (CH60)
03110 Chaperones and folding catalysts [BR:
sasa03110
]
106586369 (CH60)
03029 Mitochondrial biogenesis [BR:
sasa03029
]
106586369 (CH60)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106586369 (CH60)
Enzymes [BR:
sasa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
106586369 (CH60)
Messenger RNA biogenesis [BR:
sasa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
106586369 (CH60)
Chaperones and folding catalysts [BR:
sasa03110
]
Heat shock proteins
HSP60 / Chaperonin
106586369 (CH60)
Mitochondrial biogenesis [BR:
sasa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
106586369 (CH60)
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106586369 (CH60)
Exosomal proteins of other body fluids (saliva and urine)
106586369 (CH60)
Exosomal proteins of breast cancer cells
106586369 (CH60)
Exosomal proteins of colorectal cancer cells
106586369 (CH60)
Exosomal proteins of bladder cancer cells
106586369 (CH60)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Gag_p15
AcnX_swivel_put
Motif
Other DBs
NCBI-GeneID:
106586369
NCBI-ProteinID:
XP_014029041
UniProt:
A0A1S3PN43
LinkDB
All DBs
Position
ssa25:20988017..20995855
Genome browser
AA seq
574 aa
AA seq
DB search
MLRLPTVMRQMRPVSRALAPHLTRAYAKDVKFGADARTMMLKGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKCKYQNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDSISKGANPVEIRRGVMLAVETVINELKRMSKPVTTPEEIAQVATISANGDV
EIGAIISNAMKKVGRKGVITVKDGKTLYDELEIIEGLKFDRGYISPYFINTAKGQKCEFQ
DAYVLLSEKKISSVQSIVPALELANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKAQLHDMAVATGGTVFGDEAVGIALEDIQAHDFGKVGEVSVTKDDTMLLKG
KGDTAAIEKRQAEIVEQLENTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRSIPALDALVPINTDQKIGIDIIRRALRVPAMTIA
KNAGVEGSLVVEKILQAAGEIGYDAMEGEYVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAECVVTELPKDEKEAGMPGGMGGMGGGMGGGMF
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtctacccacagtgatgaggcagatgaggccagtcagcagggccctggcccct
cacctcacccgggcttacgccaaggacgtcaagtttggagccgatgctcggaccatgatg
ctgaagggagtggatctgctggctgatgctgtcgccgtcaccatgggacccaagggtcgc
acagtcatcatcgagcagagctggggcagccccaaggtgaccaaggacggtgtcactgta
gccaaggccatcgacctgaagtgcaagtaccagaacattggtgccaagctggtccaggac
gtggccaacaacacgaacgaggaagcgggagatggcaccaccactgccaccgtgctggcc
agagccatcgccaaggagggctttgacagcatcagtaaaggagctaaccctgtggagatc
cgccgtggcgtcatgctggctgtggagaccgtcatcaacgagctgaagaggatgtccaag
ccagtcaccacccctgaggagattgcccaggtggccaccatctctgctaatggagacgtg
gagatcggcgccatcatctccaacgccatgaagaaagtgggccgcaagggagtcatcact
gtcaaggatggcaaaaccctttatgatgagcttgagatcattgaggggctgaagttcgac
cgcggatacatctccccttacttcatcaacacagccaaaggccagaagtgtgagttccag
gatgcctatgtgttgctgagtgagaagaagatctcttctgtccagagcatcgtccctgcc
ctggaattggccaaccagcaccgcaaacctctagtcatcgtggccgaggatgttgacgga
gaggccctcagcaccctggtcctcaacaggctgaaggtgggactgcaagtggtggcagtc
aaggccccaggctttggagacaacaggaaggcccagctgcatgacatggccgttgccacc
gggggcactgtatttggtgatgaagcggtgggcattgccctggaggacatccaggcccat
gactttggtaaggttggcgaggtgtctgtcaccaaggatgacaccatgctgctgaagggg
aagggagacactgcggccatcgagaagcgccaggcagagatcgttgagcagctggagaac
accactagcgactacgagaaggagaagctcaacgagaggctggccaagctgtctgacgga
gtggctgtgctcaaggtaggaggaacgagtgatgtggaggtgaacgagaagaaggatcgt
gtgacagacgccctgaatgccaccagggccgctgtggaggagggcatcgtgcccggaggt
ggctgtgccctgctgcgctccatccctgccctggatgccctcgtgcccattaacactgac
cagaagattggaattgacatcatcagacgagccctgcgtgtgccagccatgaccattgcg
aagaacgctggtgtggagggctctctagtggtggagaagatccttcaggccgcgggggag
ataggatacgatgccatggagggagagtacgtcaacatggtagagaagggcatcatcgac
cccaccaaggtggtaagaacggcactgatggacgctgcaggtgttgcttctctgctctcc
accgcagagtgtgtggtcacagaactgcccaaggatgaaaaggaggctggcatgccaggt
ggcatgggtggtatggggggtggcatgggaggtggcatgttctaa
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