Salmo salar (Atlantic salmon): 106586426
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Entry
106586426 CDS
T04363
Name
(RefSeq) CLIP-associating protein 1-B-like
KO
K16578
CLIP-associating protein 1/2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106586426
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
106586426
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
106586426
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
106586426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
TOR1L1_N
HEAT_DAAF5
Cnd1
Sec7-like_HUS
Dopey_N
ParcG
TAN
MMS19_C
DUF2726
Motif
Other DBs
NCBI-GeneID:
106586426
NCBI-ProteinID:
XP_014029145
UniProt:
A0A1S3PN82
LinkDB
All DBs
Position
ssa25:22739221..22832440
Genome browser
AA seq
1672 aa
AA seq
DB search
MEVNMEYCLAQVVQKDLGRKVQVGQELIDYIVDKEKSQDLEQDQTALDRMVDGIATTWVN
SSNFKVALLGIDLLSALVTRLQDRFRNHVGTVLASLIDRLGDSKDQVRDQDQILLLKIME
QAASPQYVWDRMLGGFKHKNNRTREGVCLCLISTLNMYGAQGLTLSKIVPHICNLLGDPT
SQVRDAAMGCLVEIYRHVGERVRMDLSKKGLPQSRLNVIFSRFDEVQRSGNMIPSSGSDK
NFDDEDSVDGGRSSSSASSSKAPPSGRRAVAAASVRRPSSATGPGKISAKDAAAGAVDEE
DFIKAFEEVPTIQIHSNRDMEDNLSKVREVLSDDKNDWEHRVVALKKVRSLLLAGALEYD
SFPQQLRLLEAPLKLSAKDLRSQVVREACITLGYLSTLLGNKFDHCAETLMPTLLNLVPN
SAKVMATSGMAAIRLILRHTHYSRLIPIITSNCTSKSVAVRRRSYEFLELLLLEWQTHTL
ERHVAVLTETIKKGIHDADSEARSVARKCYWGFHGHYSREAEHLFQALESTYQKALQSHL
KSSDSVVSLPQSDRSSSSSQESLNRPLSVKSAIGGSMTRGKMVSSRVNSNAGGSLQRSRS
DIDVNAAASAKSRLVTVPSASPFSSAAALPPGSYASLDGTPGKIDTGRVRTRRTSSGNAV
GANATVTDSRGRSRAKMMSQSQRSRSANPTGGGKARTSSNQTGSRSSSPGKLLGHSSGYG
RISRPPATSSTPADKRSKVPRSQGCSRDSSPNRLGLARLCGKALVPGTPLSSYNTLARSR
IPRPSMSQGCSRDTSRESSRDTSPARGFKPLASRRTSRSTSALSTADPHSQSDRFGLIHQ
ARISASVNAMRVLNTGTEVEAAVADALLLGDSRNKRKPMRRRYESPGIYSDDDANSDASS
ACSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRILSRVE
LKRLCEIFTRMFADPHSKRVFSMFLETLVDFVLVHREDLQDWLFVLLTQLLKKMGADLLG
SVQAKVQKALDITRESFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLGRQMDPTD
FVNSSETRLAVSRIITWTTEPKSSDVRKTLHNWVVEELSGRSGTAALLSQQAGEGHLEER
CKQAAQVVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTNSVVKEAAMSI
LSSPSNTIGRTPPRHTPSRTSPLTSPTNCSHGGLSPSRLWGGCWSGDGLSKHPPPPHPPP
PPSTPSGPALRVLRRAYSPSMLEYDTENMNSDEIYSSLRGVTEAIQSFSYRSQEDLNEPR
GKRDDAVGREGVASSPGSDARLGLDVVEGGRTALDNKTSLLNTPSPRSFSGPRAREFAPY
GYGDTITSSYDKSALKEAVFDDDVEQFRDCRRQDGSGENKMLLPKGFAPGSQDHSDLVAD
LLKELSNHNERVDERKGALVELLKITREDSLAVWDEHFKTILLLLLETLGDKDHTIRALA
LRVLKEILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLAGSIHPEQCIKV
LCPIVQTADYPINLAAIKMQTKVIERITKESLHQLLPDIIPGLLQGYDNTESSVRKASVF
CLVAIYSVIGEELKPHLQLLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSSHS
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcaatatggagtattgtctggcccaggtggtgcagaaagacctggggcggaag
gtacaggtgggacaggagctcatagattacatcgtggataaggagaagtcccaggacctg
gagcaagaccagacggctctggacaggatggtggacggcatcgctaccacctgggtcaac
tcctccaatttcaaggtggctttgctaggtatagaccttttatctgccttagtgacaagg
ttacaggaccgatttaggaaccatgtgggaacagtactggccagtctgatagatcgtctg
ggtgattccaaagaccaagtcagagaccaagatcaaatcctgctgctgaagatcatggag
caggctgcctccccacagtatgtttgggacagaatgctgggaggcttcaaacacaagaac
aacaggaccagagagggagtgtgcctttgtctcatctcaactctcaacatgtatggagcc
caaggcctaaccctcagtaaaatagtccctcacatatgtaatcttctaggagatcccacc
agtcaggtgagagacgcagctatgggctgcctggtggagatctacagacacgtgggggag
agggtgaggatggaccttagcaagaagggcctaccacagtcacggttgaatgtaatcttc
agcagatttgatgaagtccaaagatctgggaacatgatcccatcctcaggttcagataag
aactttgatgatgaggactctgtggacgggggccggtcctcctcctctgcatcgtcctcc
aaggcgccccccagtggtaggagggctgtagctgcggcttctgtccgcaggcccagctct
gccaccggacccggcaagatctctgctaaagatgctgctgcaggtgctgttgatgaggag
gacttcatcaaggcttttgaagaggttcctactatccagatccactccaacagagacatg
gaggacaacctctccaaggtccgggaggttctgtctgacgacaaaaacgactgggagcac
agagtcgttgccctgaagaaggtgcgttctctgctcctggctggagcgctggagtatgat
agtttcccccagcagctccgtctgctggaggcccctctgaagctgtcggctaaagacctg
aggtcccaggtggtacgagaggcctgcatcacactgggatacctgtccacgttgctgggc
aacaagtttgaccactgtgcagagaccctgatgcccacactgctcaacctggtgcccaac
agtgccaaggtgatggccacgtctggcatggcagccatacgtctcatcctcaggcacaca
cactactcgcgtctcatccccatcatcactagtaactgcacgtccaaatcagtggccgtc
agaaggcgcagttatgagttcttagagctgttattactggagtggcagacacacacactg
gagaggcacgtggctgttctgactgaaaccatcaagaaagggatccatgatgctgactca
gaggccagatcggtcgcgagaaagtgttattggggtttccatggccactacagccgggag
gcggagcatctgttccaggccctggagtcaacctatcagaaggctctgcagtctcacctg
aagagttctgacagtgtcgtgtctctcccccaatcggaccgctcatcctcctcctcacag
gagagcctcaaccggcccctgtctgtcaagagtgccataggaggcagcatgacaaggggt
aagatggtaagttccagggtgaactccaacgctggcggttctcttcagcgttcccgtagt
gatatcgacgtgaacgccgcggccagcgccaagtcacgcctggtcaccgtgccctccgct
tctcccttcagctcagcagctgccctgcccccaggctcctacgcctcactagatggcaca
cctggtaaaattgatactggccgtgtgcgtacgaggagaacaagctccggcaatgccgtt
ggagccaacgctactgtgactgacagcagggggcgcagccgagccaaaatgatgtcccag
tcccagcgatccagatctgctaaccccactgggggtggtaaggcccgaacttcatccaat
cagactggcagccgctccagttcccctggtaagctgctgggccactcgtctgggtacggg
aggatcagcaggccccctgcaacctccagcacacctgcagacaagaggagcaaggtcccc
cgcagccagggctgcagtagagattcctcgcccaacagactgggcctagccaggctgtgt
ggtaaagctcttgttcctggtactcctctctcctcctacaacacgctagcaaggagccgt
atcccccggcccagcatgagtcagggctgcagcagggacacatctagggaaagcagccga
gacaccagccctgctcggggcttcaagcctcttgcctcccgacgtacctcccgctctacc
agcgccttatccacggctgacccccacagccagtcagaccgatttggtttgatccaccag
gcccgcatttctgcctcagtgaacgccatgagagtcctcaacactggcactgaggtggag
gctgctgtggctgacgcactgctattaggagactccagaaataagcggaagcctatgagg
cggcgctatgagtctcctggtatctattctgacgatgacgctaacagtgatgcatccagc
gcctgctcggaacggtcgtacggctcccgaaacggaggtatccctcactacctgcgtcag
acagaggatgtggcagaggtactcaaccactgtgccagctccaactggtctgagaggaag
gagggactgctgggactgcagaacctgctcaagagtcaaagaatactcagccgggtggag
ctgaagagactctgtgaaatcttcaccaggatgttcgctgatccacacagcaagagagtg
ttcagtatgtttctagagactcttgtagactttgtcctggtgcacagagaggaccttcag
gactggctgttcgtcctgctcacccagctactgaagaagatgggagctgacctgctgggg
tctgtccaggccaaggtccagaaggctctggacatcaccagggagtcttttccgtttgat
cagcagtttaacatcctgatgaggttcattgtggatcagacacagacacccaacctcaag
gtgaaggtggccatcctgaagtacatagagtcactgggaagacagatggatcctacagac
tttgtcaactccagtgaaacgcgactggctgtatctcgcatcattacgtggaccacagaa
cccaagagctctgacgtcaggaagacccttcataactgggtggtggaggagctatcaggc
aggtccggtacggcagccttactgtcccagcaggccggggaggggcacctggaagagagg
tgtaagcaggcggcccaggtggtgctgatctctctgtttgagctgaacaccccagagttc
accatgctgctgggagccctgcccaagaccttccaggacggggccaccaagctgctccac
aaccacctcaagaactccagcaacaccaacagcgtggtaaaggaagcagccatgtcaatt
ttgagttctcccagcaacactattgggcggaccccaccccgccacacccccagccggacc
agccccctcacctctccgaccaactgctcccatggtgggctgtctccgagtcggttgtgg
ggtgggtgttggagtggcgatgggctgtctaagcacccccctccccctcatcctcctccg
cctccctccaccccctctggccccgccctcagggtcctccgcagagcgtactctcccagt
atgttggagtatgacacagagaacatgaactctgatgagatctacagctccctgcgagga
gtcacagaagccatccagagtttcagctatcgcagccaggaggacctcaacgaaccaaga
gggaagagggacgatgctgtggggcgtgaaggtgtggcgtcctccccaggctctgatgcc
cgtttggggctggatgtggtggagggtgggcggacggccttggataacaagacctccctc
ctcaacactccgtctccccgctccttctccgggccgcgggccagggagttcgccccctac
gggtatggggacaccatcacttcatcctacgacaagagtgccctaaaggaggccgtgttc
gacgatgacgtggaacagttcagagactgccgtaggcaggacggcagtggtgaaaacaag
atgttgctgcctaagggctttgctcctggttcccaggaccactcagaccttgtggcagac
cttctgaaggagctgtccaatcacaacgagcgtgtggatgagcgtaagggggccttggtg
gagctgctgaagatcacacgagaggacagcctggccgtgtgggacgaacacttcaagacc
atcctcctactgctcctggagacgctgggggataaagaccacaccatccgggctctggct
ctgcgggtactgaaggagatcctgagaaatcaaccggcccgcttcaagaactatgctgaa
ctcaccatcatgaagaccctggaggcacacaaagactcccacaaggaggtggtgcgggca
gcggaggaggctgcctccaccctggccggctccatccacccagagcagtgtatcaaggtg
ctgtgtcccatcgtccagacggctgactaccccatcaacctggctgccatcaagatgcag
accaaggtgatagaacgcatcaccaaggagtccctccaccagctgctgcctgatatcata
ccaggactactgcagggctatgacaacacggagagtagtgttcgcaaggccagcgtgttc
tgtctggtggccatctactccgtgattggagaagagctcaaaccacacctgcagctactc
acgggcagcaagatgaagctgctgaacttgtacatcaagagggcccagacgaccaacagc
aacagcagcagttcctcggatgtgtcctcacacagctag
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integrated database retrieval system
