KEGG   Salmo salar (Atlantic salmon): 106586615
Entry
106586615         CDS       T04363                                 
Name
(RefSeq) probable ribonuclease ZC3H12C
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sasa03019]
    106586615
Messenger RNA biogenesis [BR:sasa03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     106586615
SSDB
Motif
Pfam: RNase_Zc3h12a Regnase_1_C UBA_6
Other DBs
NCBI-GeneID: 106586615
NCBI-ProteinID: XP_014029572
UniProt: A0A1S3PPG3
LinkDB
Position
ssa25:complement(32138537..32166108)
AA seq 870 aa
MGLKDHLEDETGHILNLALDLDYLHVEGTDRQASLSATVGTHSGALERDETEVGGTHSSV
SSSSSSSSCSNSSEESAASDSEDERGVQHGSGSDAQTTHPHPCHPAGQGPAQSPHSRDPK
HSTNPFTEYRSKMEFALKLGYSEELVLLVVQKLGPDALINDILGELVKLGTKSETDQAGG
SATSHSPSSSLSSSSLDSCRLDCSSQLLLDDKENIRPVVVDGSNVAMSHGNKEVFSCHGI
QLAVDWFLERGHRDITVFVPAWRKEQSRPDTLITDQEILRHLEKDKILVFTPSRRVQGRR
VVCYDDRFIVKLAYESDGIIVSNDNYRDLANEKPEWKKFVDERLLMYTFVNDKFMPPDDP
LGRHGPSLENFLRKRPVIPEHRKQQCPYGKKCTYGHKCKFFHPERGSQPQRAVADELRAK
NSSSSSTSSSKRVGEALMVKSHSMSSSSRVDGLPDPHQAPPKRQSDPSLCAPSYNDLLEE
RLGRRTKAEARRGSSSSSSSSCSSSLLASAPGGPSFSHGFSLQDWGNTSSRAPGLSGLGH
SKSYSTCESPELSYHSLMRAYSSLSLVVPRSPDRLFPADLRTGSLVSDCSSEGSVSSDSF
SPDPLLDDSLKCHYPHHHHHHCPSCYPHHPNHPPPGLTQHPHGGSYHGYPLAQSSLEDPP
SSLHHFKAQLSYLPPHFQQPSVGSHSGCSGKYPPQPLSQTSSPHSHSHSSLLGHNLGGSI
WQDNNNLYKQSPVHPRRIYPGPGQEQRLARWDPHYQHPPQACYEPFTFQSLPEGRKHPWH
SPWPRGIHSPHPQSLSSSHPPPLTHTSTAPQHQEPPALGRYQDVRENVFVNLCNIFPPEL
VRVVMVRNPHVMDAQQLAAAILAEKSQAGY
NT seq 2613 nt   +upstreamnt  +downstreamnt
atgggcctgaaggaccatctggaggatgaaacaggccacatcctcaacctggcgctggat
ttggactacctccacgtggaaggcaccgaccgccaggccagcttgagtgccacagtcggc
acccactcaggagccttggagagggacgagacggaggtaggaggcacccatagcagtgtc
agtagtagcagcagtagtagtagttgtagtaactcctctgaagagagtgctgcgtcggac
agcgaggatgagcggggggtccaacatggctctggttctgatgctcagaccacccacccg
cacccctgtcaccctgctgggcagggcccggcacagagcccccattctagggacccaaaa
cactccaccaaccccttcacagagtatcgctccaagatggagtttgccctgaagctgggc
tactctgaggagctggttctgctggttgtgcagaagctagggcctgacgccctcatcaat
gacatactgggagaactggtcaaactgggcaccaagtcagagacggatcaggctgggggg
tcggccacctcccactcgccctcctcctccttatcctcctcctcactggactcctgcagg
ctggactgctcctcccagctgctgttggatgacaaggagaacatcaggcctgtggtggtg
gatgggagtaatgtagccatgagccatgggaataaggaagtgttctcctgtcacggcatc
cagctggctgttgattggttcctggagcgcggtcaccgtgacatcactgtgtttgtgccc
gcctggagaaaggaacaatccagaccggacaccctcatcacagaccaggagatattgcgg
catctggagaaagacaagatccttgtgttcactccatctcgtcgggtccagggccgccgg
gtggtctgctatgacgaccgcttcatcgtcaagctggcctacgagtccgacggcataatc
gtctctaacgacaactaccgggacctggccaatgagaagccagagtggaagaagtttgtt
gacgagcggttgctcatgtatacgttcgtcaatgacaagttcatgcctcctgatgatcct
ctgggccgccatggtcccagtctggagaacttcctgaggaagagaccagttatcccagaa
cacaggaagcagcaatgcccctatgggaagaagtgcacttacggccacaagtgtaagttc
ttccaccctgagagaggcagtcagccccaacgcgctgtggccgatgagctgcgtgccaag
aactcctcttcatcctctacctcctcctcaaaaagggtgggcgaggctctgatggtgaag
agtcacagcatgtccagcagctccagggtagacgggctcccagacccccaccaagctccc
ccaaagaggcagtcggaccccagcctttgcgccccctcctacaacgacctcctagaagag
cgtctaggcaggaggactaaagcagaggcccgcagagggagtagcagcagcagtagcagc
agctgcagcagcagcctcctggcttctgctcctgggggaccttctttcagccacggcttc
tctcttcaggactgggggaacacttcctccagagctccagggctgtcggggcttggtcac
tcaaagtcatactccacctgtgaatccccggagctaagctaccactccctgatgagggcc
tactccagcctaagcctggtagtgccgcggagccccgatcggctgttcccggctgaccta
cggacgggctcactggtgtctgactgcagcagcgagggcagcgtgagctcagactccttc
tcccctgatcccctgctggatgacagcctcaagtgccactatccccatcaccaccaccat
cactgccctagctgctacccacatcaccctaaccacccaccccctggtctgacccagcac
ccccatggaggctcctaccatggctaccctctagctcagagcagcctggaggatcctccc
tcctccctccaccacttcaaggcccagctctcctaccttcctcctcattttcagcaaccg
tctgtggggagccactctggctgttctgggaagtaccctccccaacctctatcccagacc
tcaagcccccactcccactctcacagctctcttctggggcataacctggggggctccatc
tggcaggacaacaacaacctctacaagcaatcccctgtccacccaaggaggatctaccct
gggccaggacaggagcagcgactggccagatgggacccccactaccagcatcccccccag
gcctgctacgagcccttcactttccagtccctgcctgagggccgcaaacatccctggcac
tcgccctggcccagggggatacactctccccatcctcaatccctttcctcctcccatcct
ccacctcttacccacacctccacggccccccagcaccaggagccccctgccctgggcaga
taccaggacgtgagggagaatgtgtttgtcaacctgtgtaacattttccccccagagctg
gtgagggtggtgatggtgaggaacccccatgtgatggacgcccagcagctggctgcagcc
atcctggctgagaagtcccaggctggctactga

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