Salmo salar (Atlantic salmon): 106586615
Help
Entry
106586615 CDS
T04363
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106586615
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
106586615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
Motif
Other DBs
NCBI-GeneID:
106586615
NCBI-ProteinID:
XP_014029572
UniProt:
A0A1S3PPG3
LinkDB
All DBs
Position
ssa25:complement(32138537..32166108)
Genome browser
AA seq
870 aa
AA seq
DB search
MGLKDHLEDETGHILNLALDLDYLHVEGTDRQASLSATVGTHSGALERDETEVGGTHSSV
SSSSSSSSCSNSSEESAASDSEDERGVQHGSGSDAQTTHPHPCHPAGQGPAQSPHSRDPK
HSTNPFTEYRSKMEFALKLGYSEELVLLVVQKLGPDALINDILGELVKLGTKSETDQAGG
SATSHSPSSSLSSSSLDSCRLDCSSQLLLDDKENIRPVVVDGSNVAMSHGNKEVFSCHGI
QLAVDWFLERGHRDITVFVPAWRKEQSRPDTLITDQEILRHLEKDKILVFTPSRRVQGRR
VVCYDDRFIVKLAYESDGIIVSNDNYRDLANEKPEWKKFVDERLLMYTFVNDKFMPPDDP
LGRHGPSLENFLRKRPVIPEHRKQQCPYGKKCTYGHKCKFFHPERGSQPQRAVADELRAK
NSSSSSTSSSKRVGEALMVKSHSMSSSSRVDGLPDPHQAPPKRQSDPSLCAPSYNDLLEE
RLGRRTKAEARRGSSSSSSSSCSSSLLASAPGGPSFSHGFSLQDWGNTSSRAPGLSGLGH
SKSYSTCESPELSYHSLMRAYSSLSLVVPRSPDRLFPADLRTGSLVSDCSSEGSVSSDSF
SPDPLLDDSLKCHYPHHHHHHCPSCYPHHPNHPPPGLTQHPHGGSYHGYPLAQSSLEDPP
SSLHHFKAQLSYLPPHFQQPSVGSHSGCSGKYPPQPLSQTSSPHSHSHSSLLGHNLGGSI
WQDNNNLYKQSPVHPRRIYPGPGQEQRLARWDPHYQHPPQACYEPFTFQSLPEGRKHPWH
SPWPRGIHSPHPQSLSSSHPPPLTHTSTAPQHQEPPALGRYQDVRENVFVNLCNIFPPEL
VRVVMVRNPHVMDAQQLAAAILAEKSQAGY
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaggaccatctggaggatgaaacaggccacatcctcaacctggcgctggat
ttggactacctccacgtggaaggcaccgaccgccaggccagcttgagtgccacagtcggc
acccactcaggagccttggagagggacgagacggaggtaggaggcacccatagcagtgtc
agtagtagcagcagtagtagtagttgtagtaactcctctgaagagagtgctgcgtcggac
agcgaggatgagcggggggtccaacatggctctggttctgatgctcagaccacccacccg
cacccctgtcaccctgctgggcagggcccggcacagagcccccattctagggacccaaaa
cactccaccaaccccttcacagagtatcgctccaagatggagtttgccctgaagctgggc
tactctgaggagctggttctgctggttgtgcagaagctagggcctgacgccctcatcaat
gacatactgggagaactggtcaaactgggcaccaagtcagagacggatcaggctgggggg
tcggccacctcccactcgccctcctcctccttatcctcctcctcactggactcctgcagg
ctggactgctcctcccagctgctgttggatgacaaggagaacatcaggcctgtggtggtg
gatgggagtaatgtagccatgagccatgggaataaggaagtgttctcctgtcacggcatc
cagctggctgttgattggttcctggagcgcggtcaccgtgacatcactgtgtttgtgccc
gcctggagaaaggaacaatccagaccggacaccctcatcacagaccaggagatattgcgg
catctggagaaagacaagatccttgtgttcactccatctcgtcgggtccagggccgccgg
gtggtctgctatgacgaccgcttcatcgtcaagctggcctacgagtccgacggcataatc
gtctctaacgacaactaccgggacctggccaatgagaagccagagtggaagaagtttgtt
gacgagcggttgctcatgtatacgttcgtcaatgacaagttcatgcctcctgatgatcct
ctgggccgccatggtcccagtctggagaacttcctgaggaagagaccagttatcccagaa
cacaggaagcagcaatgcccctatgggaagaagtgcacttacggccacaagtgtaagttc
ttccaccctgagagaggcagtcagccccaacgcgctgtggccgatgagctgcgtgccaag
aactcctcttcatcctctacctcctcctcaaaaagggtgggcgaggctctgatggtgaag
agtcacagcatgtccagcagctccagggtagacgggctcccagacccccaccaagctccc
ccaaagaggcagtcggaccccagcctttgcgccccctcctacaacgacctcctagaagag
cgtctaggcaggaggactaaagcagaggcccgcagagggagtagcagcagcagtagcagc
agctgcagcagcagcctcctggcttctgctcctgggggaccttctttcagccacggcttc
tctcttcaggactgggggaacacttcctccagagctccagggctgtcggggcttggtcac
tcaaagtcatactccacctgtgaatccccggagctaagctaccactccctgatgagggcc
tactccagcctaagcctggtagtgccgcggagccccgatcggctgttcccggctgaccta
cggacgggctcactggtgtctgactgcagcagcgagggcagcgtgagctcagactccttc
tcccctgatcccctgctggatgacagcctcaagtgccactatccccatcaccaccaccat
cactgccctagctgctacccacatcaccctaaccacccaccccctggtctgacccagcac
ccccatggaggctcctaccatggctaccctctagctcagagcagcctggaggatcctccc
tcctccctccaccacttcaaggcccagctctcctaccttcctcctcattttcagcaaccg
tctgtggggagccactctggctgttctgggaagtaccctccccaacctctatcccagacc
tcaagcccccactcccactctcacagctctcttctggggcataacctggggggctccatc
tggcaggacaacaacaacctctacaagcaatcccctgtccacccaaggaggatctaccct
gggccaggacaggagcagcgactggccagatgggacccccactaccagcatcccccccag
gcctgctacgagcccttcactttccagtccctgcctgagggccgcaaacatccctggcac
tcgccctggcccagggggatacactctccccatcctcaatccctttcctcctcccatcct
ccacctcttacccacacctccacggccccccagcaccaggagccccctgccctgggcaga
taccaggacgtgagggagaatgtgtttgtcaacctgtgtaacattttccccccagagctg
gtgagggtggtgatggtgaggaacccccatgtgatggacgcccagcagctggctgcagcc
atcctggctgagaagtcccaggctggctactga
DBGET
integrated database retrieval system