Salmo salar (Atlantic salmon): 106586852
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Entry
106586852 CDS
T04363
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106586852
Membrane trafficking [BR:
sasa04131
]
Protein recycling
Others
Others
106586852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
PSII_BNR
Motif
Other DBs
NCBI-GeneID:
106586852
NCBI-ProteinID:
XP_014030051
UniProt:
A0A1S3PQZ3
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Position
ssa02:49011951..49178436
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AA seq
1288 aa
AA seq
DB search
MERGVRLCPIWHTSVFWFLLLIILSFFLAAKSEITCRSCQPGDKGRIKELLLKTDTREFA
TGYGGEVIGNGDGTTASRSLNSASAETQQLDCEAGSDECIQGKYIYSRRKRNTDMLLRSK
NALLDGGMHYGGGKQRKFTRRGEYKVSNLKMNRHSGNTDVGKARAYLIPGISHKHRVRRD
SPRANIGDDKVKSSGSPQRRETLPLSYSREGITSPAGRSRVTRSELRWSNEDRRAASSRQ
DELKLTSSTFALTGDSSHNQAMVHWSGQNSSVILMLTKLFDFNLNSVTESSLWRSTDYGT
TYQKLNEKVGAKTILSYLYVSPNNKRKIMLLTDLEVESSLLISSDEGATYQKYRLSFYIL
SLLFHPEQEDWILAYSHDQKLYSSVEFGRRWQLVHERVAPNRFYWSKTGLDKEPGLIHLE
TIISEGQALYVTCKLQNCTEANKGKPFPGYIDPNSLVVQDEYVFVQVSTGGRPIYYVSAK
REVFTPMKLPKYTLPKDLHVISTDENRVVAAVQEWNQNDTYNLYVSETGGVFYTLALENV
VSSMGHEGNVMIDLYEVAGIKGMFLANKKMDNVVKTYITYNRGRDWRLLQAPTADLRGNS
IRCELPYCSLHLHLHVSANPYTSGNIESKDSAPGIIVASGSIGAELTTSNVSMFITSDAG
NTWRQIFDEEYSVLYLDQGGALVAIRHTPLPIRHLWMSFDEGRQWNKYSFTMSPLFVDGL
LGEPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCTEGDYQTWHLHNRGEPCIMGVK
RIYRKLKPIARCVMGKTYSVTMTSEPCDCTEADFECDYGYDRRSDGKCTPAFWFLPSSMS
RSCTTGTTFINSTGYRKVVSNNCTAGVIAEYTARRQHCPTQAPKGLHLVTSEGKLTATLG
TNVTFLVFLEEGDGARTSIMVDFGDGHALTYSNVSSIENGVKHVYKAVGIYRVTATGENS
LGSESVVLYLHVTCQLEYIHLSAPFVAVKSKEVNLTAVLWPSQVGTVTYIWWFGNNTEPI
ITLEGSVACTFSREGVNTVTVQVSAGNAILQDRKTIAVHEYFRSHLLAFSSNLDDHNPDV
ADWRLDVSRVIKNSMVKATGVTPERLLVTVLPGLPTAAEFFLLPDKELTEGKPEKNSAHL
DQLSEILLSALNQNLVQFTLRPGVQVTVYAAHLSAAPLVDTSENHSGSAMLMLLSVVVLG
LAIFVVYKFKRKIPGLNVYAQMQNEKEQEMIQSPVSPTESTLVSPNTPRELVTSPELMDT
ELNTRPIGCIKSHAHVKFSTELPTYINI
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggagaggggggtcagattatgccctatttggcacaccagcgttttttggtttctgctt
ttgataattctatctttctttctagccgctaaatcagagataacatgcagatcatgtcag
ccgggagataaggggcgtattaaggaattactgcttaaaacggacacacgagaattcgca
acagggtacggaggggaagttattggaaatggagacgggacaactgcttcacggagttta
aattctgcaagcgccgaaactcaacagcttgattgtgaagctgggtccgatgaatgcatc
caggggaaatacatctactcaaggcgaaaacggaatactgacatgctgctccgttccaag
aacgcactactcgatggaggaatgcactacggtggtggtaaacagagaaaattcacccgg
cgcggtgagtacaaagtttccaacctgaaaatgaaccgtcattcaggcaatacagatgtc
gggaaggctcgcgcatatttaattcccggcatctcacacaagcaccgagttcgtagggac
agcccgagagctaatattggggatgataaagtgaagtcctccggctcaccccagagaagg
gagacactgcctctgagttactcgcgagagggcatcacctcaccggctgggcgcagcaga
gtgacacggtccgaattgcgatggagcaacgaggacagaagagcggccagttcaaggcag
gacgaactcaaactcaccagttcaaccttcgcattgaccggagattcctctcacaaccaa
gccatggtgcactggtctgggcaaaatagcagtgtgattctcatgctgaccaagctgttt
gacttcaacctgaacagtgtcacagagagctcattgtggaggtcaaccgactacggaacc
acttaccagaagctcaacgagaaagtgggggcgaaaacaatcctcagctacttgtacgtc
agtcccaacaacaagagaaagatcatgcttctgactgacctggaggtggaaagcagcctg
ttgatcagctccgatgagggagccacctatcagaagtaccgcctcagcttctacatcctc
agcctgctcttccaccccgagcaggaggactggatccttgcctacagccatgaccagaag
ctgtacagctcggtggagtttggaaggaggtggcaacttgtccatgagagggtggccccc
aatcgattctactggtcaaaaacgggtttagacaaagaaccgggcttaattcacctggaa
accatcatctctgaaggacaggcgctgtacgtcacctgcaagctgcagaactgcaccgag
gccaataagggcaagccgtttcctggctacattgaccccaattcccttgtggtgcaagac
gagtatgtttttgtccaggtgtcaactggtgggcgtccaatctactacgtgtcagccaag
cgggaagtcttcacacccatgaagctacccaagtacaccttgcctaaggatctgcatgtg
atcagtacggatgagaaccgggtggttgcggcggtgcaggagtggaaccagaacgacacc
tacaacctgtacgtgtcagagactggaggggtcttctacaccctggccctggagaacgta
gtcagcagcatggggcacgagggcaacgtcatgatagacctgtatgaggtggcgggtata
aaagggatgttcctcgccaacaagaagatggacaacgtggtgaagacttatatcacctac
aacagagggagagactggaggctactgcaggctcccactgctgacctgaggggcaacagt
atccgctgtgaactaccatactgttccctacaccttcacctacatgtgtcggccaaccct
tacacgtcggggaatatcgagagcaaggactctgccccggggatcattgtggcttcaggc
tccatcggagcggagttgaccaccagcaacgtgagcatgttcatcacctcggacgccggc
aacacatggagacagatctttgatgaggagtacagtgttctctacctggaccaaggaggg
gccctggtggctataagacacactccactccccatccgacacctatggatgagtttcgac
gaggggagacagtggaataaatacagtttcaccatgtcgcccctgtttgtggacgggtta
ctaggggagccgggggaggagactctcattatgacgatctttggacacgtcagtcaccgg
tccgagtggcagctggtcaagattgacttcaggtccatcttcaaccggagatgtacagag
ggggattaccagacatggcacctacacaaccggggcgaaccgtgcatcatgggagtgaaa
agaatctacaggaagttgaagcccatagccaggtgcgttatgggtaagacgtactcggtc
acgatgacctcggagccctgcgactgcacagaggccgactttgagtgtgactatggctac
gataggcggagtgacggcaagtgcacccccgccttttggttcctcccatcgtccatgtct
agaagctgcaccacagggactactttcatcaacagcactggctacaggaaggttgtgtcc
aataactgcacagcgggtgtgatagcagagtacacggccaggaggcagcactgtcctacc
caggcccctaaaggcctgcacctcgtcaccagtgaaggaaagctgaccgctacgctgggc
accaatgtcaccttcctggtgtttcttgaagagggcgacggagccaggacgagcatcatg
gtggattttggggacggtcacgctctgacctactccaacgtgagctccatagagaatggg
gtcaagcacgtctacaaggctgtcgggatctaccgtgtgacagctacaggagagaacagc
ctggggtcggagagcgtggtgctgtacctccacgtcacatgtcagctggagtatatccat
ctctccgctccctttgtggcggtgaagagtaaggaagtcaacctcactgctgtgctgtgg
cctagccaagtgggaacagtcacctacatctggtggttcggaaataacactgagccgata
atcaccctggaagggagcgtggcgtgcacgttctcccgggaaggcgtcaacactgtcacc
gtgcaggtgtccgctgggaacgccatcctgcaggaccggaaaaccatcgctgtccacgaa
tatttcaggtcacatctactagccttctcatctaacctggatgaccacaaccccgacgtg
gccgattggagactggacgtcagcagagtcatcaagaactccatggtcaaagccacaggg
gtgaccccggagcggctccttgtcactgtcctaccagggttgcccacggcagcagagttt
ttcctcctgccagacaaagagttaacggagggcaagccggagaagaactcagctcattta
gaccagctctctgaaatcttacttagcgccctcaaccaaaacctggtccagttcaccctt
cggcctggggtccaggtcacagtatatgctgcacatttgtctgcagcgcccctagtggac
acgagtgagaaccacagcggctcggccatgctgatgctgctgtcggttgtggttctgggt
ttggcgatatttgtcgtctacaaattcaaaaggaagatcccaggcctcaacgtctatgcg
cagatgcagaacgaaaaagaacaagaaatgatccagagtccagtaagtccgacggaaagc
accctggtgtccccgaacactccgagggagctggtgacttctccggagcttatggacaca
gagttgaacacacggcccatcggatgcatcaaatctcacgcacatgtcaagttctcaacg
gaactccccacgtacatcaacatttaa
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