Salmo salar (Atlantic salmon): 106586901
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Entry
106586901 CDS
T04363
Name
(RefSeq) nucleoporin NUP53-like
KO
K14313
nuclear pore complex protein Nup53
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106586901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106586901
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106586901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
106586901
NCBI-ProteinID:
XP_014030112
UniProt:
A0A1S3PR00
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Position
ssa25:complement(48122078..48130751)
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AA seq
349 aa
AA seq
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MVSKAIIKRHPPLSSLLCQKGNIERLPGTPAKQTRPGFDKSTREGTEPMTLGSPTSPKPG
PSAQFLPGFLMGDLPAPITPQPRSFGVMDMRSPLQIGGSPPQPVVPTPKDKSGAPPVRSI
YDDLSCPAIGMSPMGAHKQPFSMMHTPLSGYMAVTPGTASSLFSPATIGQQAKSTMSPAQ
VDPFFTQGDALSSEDHLDDTWITVFGFPPASASYILLQFAQYGNITKHVMSNTGNWMHIQ
YQSRLQARKALSKDGKIFGEAIMIGVKSCIDKNVMESSDRSSTSSGSVFTPPVRNATPSH
HVSTPRSSMRPLSAAYKASSSDYQVLADEQTPRKDDGLVSKAMEYMFGW
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggtttccaaggccatcattaagagacatcctcccctcagcagcctcctgtgccagaag
ggaaacatcgagagacttccaggaacaccggccaaacagaccaggcccgggtttgacaaa
tcaacgagagaaggcacggaaccaatgactctgggttccccgacatcacccaagcccgga
ccgagtgcccagtttctccccgggtttttgatgggggatctgccagcacctatcacaccc
cagcctcggtcattcggagtcatggatatgaggtcaccacttcaaataggtggctctccc
cctcaacctgtggttccgacacccaaagacaagagtggggcccctccagtcaggagtatc
tatgatgacctgtcctgtcctgccatcgggatgtcccctatgggtgcacataaacagccc
ttctcaatgatgcacaccccactgtctggctatatggcagttacaccaggaacagcgtcc
agtctatttagtcctgctaccatcgggcagcaagcgaagtcaacaatgtctccagcccaa
gtagaccctttcttcactcagggagatgcactgtcttctgaagaccatctagatgatact
tggatcactgtatttgggttccctcctgcctccgcgtcttatattctgttgcagttcgcc
cagtatggaaacataacgaaacacgtgatgtccaacactggtaactggatgcacattcaa
tatcagtctagactccaagcaagaaaagctctaagtaaagatgggaagatttttggcgaa
gctataatgattggtgttaaatcatgcatcgataagaatgtgatggagagctcagaccga
agctctacctcctctggctcagtatttactcctcctgtcagaaatgcaacccccagccac
catgtctctacacctcgctcctcaatgaggcccctcagtgcagcctacaaggcctccagc
agtgactaccaggtgttggcagacgaacagaccccgaggaaagacgacggtttggtttct
aaagcgatggagtacatgttcggctggtga
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