Salmo salar (Atlantic salmon): 106587016
Help
Entry
106587016 CDS
T04363
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1-like
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04020
Calcium signaling pathway
sasa04080
Neuroactive ligand-receptor interaction
sasa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
106587016
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106587016
04082 Neuroactive ligand signaling
106587016
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106587016
Ion channels [BR:
sasa04040
]
Ligand-gated channels
Glutamate (ionotropic)
106587016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
DUF6724
SIP
Motif
Other DBs
NCBI-GeneID:
106587016
NCBI-ProteinID:
XP_014030305
UniProt:
A0A1S3PRH9
LinkDB
All DBs
Position
ssa26:1488668..1550402
Genome browser
AA seq
938 aa
AA seq
DB search
MRVFLLAFFISCSCAGGGCEPKIVNIGAVLSQKRYEQVFKDAVTQANTLYGKDKFKMNAI
SVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAQVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKNKNYENLDQLSYDNKRGPKAEKVLLFSQDTNLTSMLLEAKDLEARVIILSA
SEDEAASVYKAARQLNMTGSGYVWLVGEREMSGKALSEAPDGLLGLQLINGKNESAHIND
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWRTGPLFKRVLMSSKYPDGLTGRIEFNDD
GDRRFATYSILNYQKTRLVQVGIFNGTQVVMNPQRKIIWPGGETEKPRGYQMSTRLKIVT
IHQEPFVYVQPTTSDGTCQKEKTVNGLKDVQKVICTGPNGTIPGQPIVHQCCYGFCIDLL
IKLADTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNER
AQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRF
SPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMII
VASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMY
RHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMR
KDSPWKQNVSLSILSSHENGFMEELDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGG
IVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSDRAEPDSKQKTSFRSI
STNLASNIKRRRSSKDTPYPTDITGQLNLSDPSVSTVV
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtatttctgcttgcgtttttcatctcctgctcctgtgcgggtggtggatgtgaa
cccaagattgtcaatatcggagcggtcctgagccagaagaggtatgaacaggtgttcaag
gacgccgtcacccaggcaaacactctgtatgggaaagataagttcaagatgaacgccatc
tctgtcactcataaacccaatgcaattcagatggctctctccgtctgcgaggacctcatc
tcgaaccaggtgtatgccattctggtgagccacccgcctcagtcgaatgaccatctgacc
cccacacccgtgtcctacaccgcagggttctaccgtatccctgtggttgggctcaccacc
cgcatgtccatctattcggacaagagcatccacctgtctttcctgcgtaccgtgcccccc
tactcccaccaagcccaggtgtggttcgacatgatgagagagttccgctggaaccacatc
attctgatagtgagcgacgaccacgagggccgcgctgcccagaagaggctggagaccctg
ttggaggagagggagaccaagaataaaaacaagaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacccaaggcagagaaagttctcctgttcagccaagacaccaac
ctgacatccatgctgctggaggccaaggacctggaggctcgcgtcatcatcctctctgcc
agcgaggatgaagcggcgtcggtctacaaagctgcgcgccagctcaacatgacgggttct
ggctacgtgtggctggttggagagagggagatgtctggtaaagctttgagtgaagcacca
gatggcttgctcggccttcagctcatcaacggcaagaacgagtcggcgcatatcaacgat
gccgtggccgtggtggcacagtccatccaagagctttttgagaaggagaacatcacagaa
ccgcctcgcggttgtgtaggcaacacaaacatctggaggactggaccgctcttcaaacga
gtgctgatgtcatccaagtacccagatggcctgacaggacgcatcgagtttaatgacgat
ggtgacaggcggtttgctacctacagcatcctcaactaccaaaagaccaggctggtgcaa
gtgggcattttcaacggcacccaagtggtgatgaatccgcagaggaagatcatttggcca
ggaggagagacggagaagccaagaggataccagatgtctaccagactaaagatagtaacc
attcatcaggagccatttgtctatgtccaacccacaacaagtgatggaacttgccaaaaa
gaaaaaactgtaaatggacttaaagatgtccaaaaagttatatgcactggccccaatgga
accatcccaggacagcctatagtacaccaatgctgctacggcttttgcattgacctcttg
attaaactagcggataccatgaacttcacctatgaggttcatctggtggctgatgggaag
tttggtacacaggagcgggtaaacaacagcaacaagaaggagtggaacggcatgatggga
gaactcctgggtggcctggcagacatgattgtggcgccgctcacgatcaacaatgaacgc
gcccagtacatcgagttctcaaaaccctttaagtaccaggggcttaccatcctcgtgaaa
aaggaaataccacgcagtactttggattcgttcatgcagccctttcagagcaccctgtgg
ctgctggtgggtctatcggtccatgtggtggcggtgatgctctacctattagaccggttc
agcccatttggaaggtttaaagtgaatagcgaagaagaagaagaggacgccctcacctta
tcctccgccatgtggttctcttggggagtccttttgaactccgggattggagaaggagca
ccccggagcttttcagcaaggatcttaggtatggtgtgggctggatttgccatgatcatt
gtggcatcctacacagccaatctggcagccttcctagtgttggaccggcctgaggagcgc
atcaccggcatcaatgatcccaggctgcgaaacccatcagacaagttcatctacgccaca
gtgaagcagagttcggtggacatctacttccggcgccaagtggagttgagcaccatgtac
cgccacatggagaagcacaactacgaaagcgctgctgaggccatccaagctgtgcgcgac
aacaaactgcacgcgttcatctgggactctgccgtcctggagtttgaggcatcacagaag
tgtgacttggtgacaacgggagagctgttcttccgctccggcttcggcattggcatgcgg
aaggacagcccttggaagcaaaacgtttccctgtccattcttagctctcatgagaatggg
ttcatggaggaactagataaaacctgggtgagataccaggagtgtgactccaggagtaat
gccccagccaccctcacttttgagaacatggcaggtgtgttcatgttggttgctgggggt
atcgttgctggaatcttcctcatctttattgagattgcgtataagcgccacaaagatgcc
cgcaggaagcagatgcagctggccttcgctgcggtcaacgtgtggaggaagaacctacag
gataggaaaagtgatagagcagagcctgactccaaacagaaaacctcttttaggtccatc
agtaccaacctggcctccaacatcaagagacgtaggtcctccaaagacacgccttatccc
acggacatcacaggccagctcaacttgtcagacccctctgtcagcacggtggtgtga
DBGET
integrated database retrieval system
