Salmo salar (Atlantic salmon): 106587054
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Entry
106587054 CDS
T04363
Name
(RefSeq) low-density lipoprotein receptor-related protein 4-like
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106587054
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
106587054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
SGL
Vgb_lyase
cEGF
EGF_LRP2
DUF5050
EGF_CA
UPF0113
Motif
Other DBs
NCBI-GeneID:
106587054
NCBI-ProteinID:
XP_014030411
UniProt:
A0A1S3PRY9
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All DBs
Position
ssa26:complement(4698583..4975193)
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AA seq
1921 aa
AA seq
DB search
MQVSVVLCSMITFFLRSQGVLGSAECSCGRNHFTCAVSVFGECTCIPAQWQCDGDNDCGD
HSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDCEDDSDEQDCPPRECEEDEFHCQN
GYCIRSLWHCDGDNDCGDNSDELCDMRKCSDKEFRCTDGSCIAEHWYCDGDTDCKDGSDE
ENCPSDVMTATCSVEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQPCRSVEFMCS
SGMCINAGWRCDGEFDCDDQSDEKNCTTSMCTADQFRCASGRCVRLSWRCDGEDDCSDGS
DEDDCEKTGTCVDTPPCAPDQFLCGNGRCIGQRKVCNEVSDCGDGTDEHPHQDCRPRSSD
GNCNLNNGGCSQKCQMARGLVQCTCHTGYRLMEDGRACQDVDECAEEGYCSQGCTNTEGG
FQCWCVQGYELRPDKRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDF
HHNQELVFWSDVTLDRIMKANLNGSNVEEVVSTGLESPGGLAIDWIHDKLYWTDSGTSRI
EVANLDGTHRKVLLWQSMEKPRAIALHPIEGKIYWTDWGNTPRIEYANMDGSNRRVIADT
HLFWPNGLTIDYAGHRMYWVDAKHHVIERADLDGRNRKAVISQGLPHPFAITVFEDSLYW
TDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGGRNRCGTNNGGCSHLCL
PGNKTYTCDCPTGFKKVDQHNCALSLDKFLLFARRTDIRRISFDTEDMSDDVIPLADVRN
AVALDWHAEEGFIYWTDVTTDSINRAQWDGSRQEVVVDTSLESPAGLAIDWVTNKLYWTD
AGTDRIEVSNADGSMRTVLIWENLDRPRDIVVDPIGGYMYWTDWGVSPKIEQAGMDASSR
IVIISSNLTWPNGLAIDYQTQRLYWADAGMKTIEFGNFDGSDRQVLIGSQLPHPFGLTLH
EEKLYWTDWQSKSIQCANKMTGLGRQTLAENLENLMDIHMFHRYRTTVRTPCAVNNGGCS
HLCLLAPPTKGSSCTCPTGINLQLDGKTCTHGMSSFLIFARRTDIRMVSLDIPYFADVVL
AVNRSMKNTIAIGVDPKEGKVYWSDSTLKKVSRANINGTAHEDIIATGLMTTDGLAVDAV
GRKIYWTDTGTNRIEVANLDGSMRKVLIWQNLDSPRAIALYHEMGYMYWTDWGEHAKLER
SAMDGSDRLVLISNNLGWPNGLAVDSAGSQLLWADAHTERIEAADLNGQNRHTLVSPVQH
PYGLTLLGPHIYWTDWQSRSIQRADKTTGANTITVRSNLPGLMDIQAVDREKPLSFNKCG
RRNGGCSHLCLPRPNGTSCACPTGILLKGDARSCDDSPETYLLFSNRVSVRRISLDTNDH
TDVHVPVPELHNVISLDYDSVDGKLYYTDVSLDVIRRVNLDGTGMETVISQGLKTTDGLA
VDWVTRNMYWTDTGRNTIEVARLDGTSRKVLVNNSLDEPRAIAVFPSKGYLFWTDWGHIA
KIERAHLDGSDRKVLINTDLGWPNGLTLDYDTRRIFWVDAHLDRIESSDLNGKLRQILVS
PVSHPFALTQLKPVSSPLTPFSRLSQQDRWIYWTDWQTKSIQRVDKHTGRSKETVLANVE
GLMDIIIVSPQRQSGTNHCGVNNGGCTHLCFANTNSFVCACPDEPDSRPCSTISGYVPTS
PDRETTSTPAPNKIPKAPTDTPQQGPPLINCTDKSLSVEGCVESNVVTAPHGEGLHISYG
IGGALTILAILIIITAFIIYRHKKSKFADPGVSNLTYSNPSYRTSTQEVKIETSQKPPIY
NQLRYKKEGGGDSGYTKEKIRIVEGVCLLSSEELYWEDLKQLKPSRGGLHTCMRTDTVSL
QASSASLDDGETEQLLQEETSECSSINTLTPVTVTPQRHPQHSLPDTGWTPARKPSTESE
V
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtctctgtggtgctgtgtagcatgataactttctttcttcgcagtcaaggcgtg
ttgggcagtgcggagtgttcatgcgggcgcaaccacttcacgtgtgcagtgagcgtgttt
ggggagtgtacatgtatcccggcccagtggcagtgtgacggggacaacgactgtggcgat
cacagcgacgaggatggatgcatgctgcccacctgctctccactggacttccactgtgac
aatgggaagtgtatccgccgctcctgggtgtgtgacggggacaacgactgtgaggatgac
tccgacgaacaggactgtcctcctagagagtgtgaagaggatgagttccattgtcagaat
ggctactgcatccgcagcctgtggcactgtgatggggacaatgactgtggggataacagt
gacgagctgtgtgacatgcgtaagtgttccgataaggagtttcgctgtacagatgggagc
tgcattgctgaacactggtactgtgatggagacactgactgcaaggacggatcagacgag
gaaaactgcccatctgatgtaatgacggccacctgtagtgttgaagaattccaatgtgcg
tacggacgctgtattctggacatttaccactgtgacggagatgacgactgtggagactgg
tctgatgagtccgactgctcctcccaccagccttgtcgttctgtggagttcatgtgcagc
agtgggatgtgcatcaacgctggctggaggtgtgacggggagtttgactgtgatgaccaa
tcagatgagaagaactgcaccacctccatgtgtactgcggatcagttccgctgtgcatcg
ggacgctgtgtcaggttgtcatggagatgtgacggtgaggatgactgctctgacggcagc
gatgaagatgactgtgagaagactggtacgtgtgtggacacccctccatgtgctccagac
cagtttctgtgtggtaacggccgctgtattggccagaggaaggtctgtaatgaggtcagc
gactgtggagatgggactgatgaacaccctcaccaggactgccgcccgcggtccagcgat
ggcaactgtaacctgaataacggaggctgttctcagaagtgtcagatggccagaggtctg
gtccagtgtacctgtcatactggctacagactgatggaggacggcagggcctgccaggat
gtggatgagtgtgcagaggagggctactgcagccagggctgtaccaacacagagggaggg
ttccagtgctggtgtgtgcagggctatgagctgaggcctgacaagcgcagctgcaaggcg
ctgggtcctgagccagtgctgctgtttgcgaaccgtatagacatccgccaggtgttgccc
caccggtccgagtacactctgctgctgaacaacctggaaaatgccatcgctctggacttc
caccacaaccaggagctggtcttctggtctgatgtcacgctcgaccgcatcatgaaggcc
aacctgaacgggagcaatgtggaggaagtggtctccactggcttagagagtccaggtggt
ctggctatagactggatccatgacaagctgtactggactgactcagggacgtcccgtatt
gaggtggccaatctggatggaacccaccgcaaggtcctcctatggcagagcatggagaaa
ccccgagccatcgcactgcaccctatagagggtaagatctactggacggactggggtaac
actcctcgtatcgagtatgccaacatggacggctcaaaccgccgcgtcatcgccgacacc
cacttgttctggcccaacgggctgaccatcgactacgccgggcaccgtatgtactgggtg
gacgccaagcatcacgtcatcgaaagagctgaccttgacggacggaaccgtaaggccgtc
atcagccaaggcttgccccatccatttgccatcacggtatttgaggatagcctttactgg
acagactggcacaccaagagcatcaacagtgccaacaagttcacgggcaagaaccaggag
ataatcagaaacaagctgcacttccccatggatatacacacactgcacccgcagagacag
cccgcaggtgggcgtaaccgatgtgggaccaacaacgggggctgcagccacctctgtctc
cctggcaacaagacctatacatgcgactgccccacgggcttcaagaaagtggaccagcat
aactgtgccctgagtcttgacaagttcctgctttttgcccgaaggacggacatccgacga
atcagcttcgacaccgaggacatgtcggatgatgtcatcccgctggccgacgtacgcaac
gccgtggcactggactggcacgccgaggagggcttcatctattggacggacgtcaccacc
gactccatcaaccgcgcccaatgggacggctcaaggcaggaggtggtggtggacaccagt
ttggaaagtccagccggtctggctattgactgggtgaccaacaaactttactggaccgac
gcaggtacagatcgtatcgaggtatctaatgcagacggcagcatgcgtaccgttctgatc
tgggagaatcttgaccgacccagggacatcgtggttgacccaattggaggatatatgtac
tggacagactggggtgtgagtcctaagatagagcaggcagggatggacgcatccagccgt
atcgtcatcatctcttccaacttgacatggcctaacggactggcaattgactaccaaaca
cagcgcctgtactgggccgacgccgggatgaagaccatcgagtttggcaactttgacggc
tcagacagacaggtgttgattggcagtcagttgccccacccctttgggctgactctgcat
gaggagaagctctattggacagactggcagtccaagagcatccagtgtgccaacaaaatg
actggcctgggacgacagacactcgccgaaaacctggagaacctcatggatattcatatg
ttccaccgctaccgcaccaccgtacggacaccttgtgcggtgaataatgggggctgcagt
cacctgtgtctgttggctccaccgacaaaaggctccagctgtacctgtcctactggcatc
aaccttcagctggacggaaagacctgcacacacgggatgagtagtttcctgatctttgca
cggcggactgatatcaggatggtttctctggacatcccctactttgctgatgtggtgctg
gctgtcaacagatccatgaaaaacaccatcgccatcggagtggaccctaaagagggtaaa
gtgtactggtcagacagcacactgaagaaggtgagtagagctaacatcaatgggacggct
catgaggatatcatcgctacaggtctgatgaccactgatggtctggcggtggatgcggtg
ggtcgaaagatctactggactgacaccggaacgaaccggatcgaggtggccaacctggac
ggctccatgaggaaggttctgatctggcagaacctggacagcccgcgagccatcgccctc
taccacgagatggggtatatgtactggacagactggggggagcatgctaagctggagcgg
tcagcgatggatggctcggaccgtttggttctgatcagtaacaacctaggctggcctaac
ggactggccgttgacagtgccggctcacagctactgtgggctgacgcgcacacagagcgc
atcgaggcggcagacctgaacgggcagaaccgccataccctggtatccccggttcagcac
ccgtacggtctgaccctactaggaccacacatctactggactgactggcagagccgcagc
atacagcgggctgacaaaaccaccggcgccaacaccatcaccgtacgcagcaacctgccc
gggctcatggacatacaggccgtggatagagagaagccactgagtttcaataagtgtggt
agaaggaacgggggctgtagtcacctgtgtctgccccgccccaacggtacttcctgtgcc
tgtcccaccggcatcctcctcaagggggacgccaggtcatgtgacgactcccccgagacc
tacctgctcttctccaaccgggtcagcgttcgacgcatctccctggacacaaatgaccac
acggacgtgcatgtgcccgtgcctgagctgcacaacgtcatctcactggactatgacagc
gtggacgggaagctgtactacactgatgtcagccttgacgttatcagacgggtcaacctg
gatggtacagggatggagaccgtgataagccagggtctgaagactactgatggtctggct
gtggactgggtgaccaggaatatgtactggacggacacaggtcgcaacaccatcgaggtg
gcccgactggacgggaccagccgcaaagtactagtcaacaacagcctggatgaacccagg
gccatcgctgtgtttcccagcaaagggtacctgttctggacagactggggtcacattgct
aagattgagcgggcacacctagacggatcagaccgtaaagttctgattaacacagacctg
ggctggcccaacggactcacactggactacgacacacgcaggatcttctgggtggatgct
cacctggaccgcattgagagttccgacctaaatggaaagctccgtcaaatcctcgtcagc
cctgtgtcccacccctttgccctcacacagttgaagccggtgtcctcccctctaacccct
ttctcccgactctcgcagcaagaccgttggatctactggacggattggcagactaagtcc
attcagcgtgtggacaaacacactggccgcagcaaggagacggtgctggccaacgtggag
ggcctcatggacatcatcatagtctcgccacagaggcagagtggcactaaccactgtgga
gtgaataatggaggatgtactcatctctgcttcgctaatacaaacagctttgtctgtgcc
tgccctgatgaaccagacagcaggccctgctccaccatctcaggttatgtgccaacctca
ccagacagagagaccaccagcaccccagcccctaacaagatccccaaagcccccacagac
acgcctcagcaaggacccccactgattaactgcacagacaagagcctgagtgtggagggc
tgcgttgagagcaacgtggtgacggctcctcacggggaggggcttcatatcagctatggg
attggaggagcattgaccattctggccatcctgataatcatcactgccttcattatttac
agacacaaaaagtccaagtttgctgaccccggggtgagcaacctgacctacagtaacccc
tcatataggacgtcaacgcaagaggtcaagattgagacctctcaaaagccgcccatttac
aaccagctacgatataagaaagaggggggtggggacagtggctacaccaaggagaagatc
cgcatcgtggaaggagtgtgtctcctctccagcgaggagctgtactgggaggacctgaag
cagctgaagccgtcgcggggtggtctgcacacatgcatgcgcacagacactgtgtccctg
caggccagcagcgcctcgctggacgatggcgagacagagcagttgctccaagaggagacg
tcggagtgttcgtccataaacacgctgacccccgtcaccgtcacaccccaacgccatccc
caacacagcctgcccgacaccggctggacccccgcacgcaaaccctccaccgagagcgag
gtgtaa
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