Salmo salar (Atlantic salmon): 106587118
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Entry
106587118 CDS
T04363
Name
(RefSeq) autophagy-related protein 13-like
KO
K08331
autophagy-related protein 13
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04136
Autophagy - other
sasa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106587118
04136 Autophagy - other
106587118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106587118
03029 Mitochondrial biogenesis [BR:
sasa03029
]
106587118
Membrane trafficking [BR:
sasa04131
]
Autophagy
Autophagosome formation proteins
ULK complex
106587118
Atg1 complex
106587118
Mitochondrial biogenesis [BR:
sasa03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
106587118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
106587118
NCBI-ProteinID:
XP_014030614
UniProt:
A0A1S3PTR8
LinkDB
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Position
ssa26:9857389..9867351
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AA seq
549 aa
AA seq
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MMDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKVCTRSLSSPTGSDWFNLAIKDIP
EVTHEAKKALSGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYN
RLSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLTGLGEGFQTVRVGVVGTP
IGTITLSCAYRTNLAFMSTRQFERTAPIMGIIIDHFVERPFGNIGHMRPCNYRAPGEDEG
AYNGVEDSQEVCTTSFSTSPPSQCVFTVSKAHLKTPKPAVMDTLKVPMMGLAFSQQLYCS
RLSYQPPVLVGAADFCHPSTLNAANPHQVTTQMGIPGKEGGVPQQVPVQPCHGAQAEHGR
VSSCPPADHVLATPSSSGEDAETSSRSIEVKSVSPCDVLETTFTRKVGAFVNKPGTQVTT
ASLDLPFAAFAPRAYDLEENDPMVQPPESPATSSPLQGSLHSQGSGESGGPAQDDFVMVD
FKPAFSKDDLLPMDLGTFYREFQNPPQLASLTIDVSSQSMAEDLDSLPEKLAVYEKNIDE
FDAFVDTLQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgatggacagtgatctaagtcctcaggataaaaaagacttggacaagttcatcaagttt
tttgctttgaagacagtgcaggtgatagtccaagcacgacttggggaaaaagtatgcaca
cgctccttgtcttcacctactggctctgattggttcaatctggcaatcaaagatatccca
gaagttacacatgaggcaaagaaagctctgtccgggcagcttcctggcatcggacgatcc
atgtgtgttgagatctccctcaaaacctcagagggagactcaatggaattggagacatgg
tgtctcgaaatgaacgagaaatgtgacaaagatattaaggtgtcctacaccgtctataac
cgcctgtcgttactgctcaagtcactgctggccattacaagggtaaccccagcctacaaa
ctctcacgaaagcaaggccatgactatgtcatcctgtacaggatatattttggagaggtt
caactcacaggattgggagaagggttccagacagtgcgtgtaggagttgtgggaactccc
attggaacaatcaccttgtcttgtgcttacaggacaaacctggccttcatgtccaccagg
cagtttgagaggacggctccgattatgggcataattattgaccacttcgttgagcgcccc
tttggcaacataggacacatgcgtccatgtaactacagagcacccggggaagatgaagga
gcatacaatggggtggaggattctcaggaagtgtgcaccacgtccttctccacttctcca
ccctcacaatgtgtgttcactgtaagtaaggcacatttaaagacccctaaacctgcagtg
atggacactctgaaagtccccatgatgggcctggccttctcacagcaactctactgctct
cgtctttcttatcagcctcctgttcttgttggagctgctgacttctgccacccctccacc
ttaaatgctgccaacccacaccaggtaaccacccagatgggaattccagggaaggagggg
ggcgtaccccagcaggtgcctgtgcagccttgtcatggtgcccaggcagagcatggacga
gtgtcctcatgcccccctgctgatcatgttctcgccacgccctccagcagtggtgaggat
gcagagacctcgtcgaggagcatcgaggtgaagagtgtctctccctgtgatgtactggag
accaccttcaccaggaaagtgggtgcctttgtcaacaagccaggcacacaggtaaccaca
gcaagcctggacttaccatttgcagcgtttgctcccagagcctatgacctcgaggaaaat
gaccctatggttcagccgccggagtccccagccacgtcctctcccctgcagggcagttta
cactcccagggctctggtgagagtggtggcccggcacaggacgactttgttatggtggac
tttaagcctgcgttctccaaggatgacctccttcccatggaccttggcacattctacaga
gagttccagaaccccccacagctcgccagcctcactattgatgtcagttctcagtccatg
gcagaagacctggactctcttcccgaaaaactggcagtatacgagaagaacattgatgaa
tttgatgcatttgtggacacattgcagtag
DBGET
integrated database retrieval system
