Salmo salar (Atlantic salmon): 106587239
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Entry
106587239 CDS
T04363
Name
(RefSeq) cartilage intermediate layer protein 1-like
KO
K24436
cartilage intermediate layer protein
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sasa04990
]
106587239
Domain-containing proteins not elsewhere classified [BR:
sasa04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
106587239
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
I-set
Ig_2
TSP_1
CarboxypepD_reg
CarbopepD_reg_2
ig
TSP1_spondin
TSP1_CFP_C
V-set
Motif
Other DBs
NCBI-GeneID:
106587239
NCBI-ProteinID:
XP_014030916
UniProt:
A0A1S3PTE4
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All DBs
Position
ssa26:complement(16470481..16480978)
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AA seq
1258 aa
AA seq
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MARSRTLGSALSCIRERAAGQSAQTQHPAYREERDYATLLHRDTHRELLEVLVEYSLCCR
AWRVKVITIRSEVTGQRQQQSARMCCLSTWAFLLALGVTTTAQGTWRRDSLRVARQNNPA
VYHSEDNYEWTTWFNVDHPGGRGDYEQLDAIRFYYRARVCDAPQALEARTTDWIPARNTG
EKIHEDPSLGFWCANAEQAPGRNCSNYAVRFLCPKGNTGSEGSQDAWGPWSDWSHCSAKC
GLVAMQVRSRKCQSQPKQWDKQCSGPTVEGRACKGPECPGTGCTLHCEMGRVNAECDTCM
CQDHIVLGSVRSAGGLPAPGATILRFGPSSKLLTVTDHNGHFRIPGICPDGNATLTVQLR
NHAPHTVIVPHSTERTSVLSIMLNRAEKLHVVKNPENKARREGQTAALCCKVGGSPEPED
YQWFHNGSLLDGKQLNYDSTLVLRNLSMEQTGEYYCRASNQAGAIKSKPAIVTVLGKDQP
SCNPKPESYLIRLPHDCYQNSTDSLYYDVGKCHSGTCAGRLDNGIRCKDSVAYCCGVAKM
EEKQLKCQGYELPTMVVTECGCQKCVETKAIVRGRAVAADTGEPMRFGHVYINGARVSRT
GYKGTFSIQVPHDTERLVMTFVDNMDKFVNTTKVLPFNTKGGAVYHEIKLLRKKEPVTIS
STELNTLQLGEVEGQNPIAEIQIPPNSFYKQSGEVFVGNVKASITFLDARDVSTAAAAQS
DLNFIGDEGDTLPLRTYGMFSVDFRDEEAGEPLNAGEVKVKMDSTQVKMPEHLDTMKLWS
LNPDTGLWEEEGVFQMEKKQRGKREERTFLIGNMEIRERRLFNLDVPENRRCYIKVRGFR
SDRFMPSEQVEGVVVTLINMEPTAGYSSNPRAWGRFDSVITGPNGACLPAFCDDQKPDAY
SAHVMANMGGEELEAVPSAPKFNPNIIGVPQPYLGKLNYRRSDHNDPRLKKTAFSINVAK
PSPNTAEELNGPVYSFDQLKECEEAPFTAGHFRFTRVEGDRYDYNTVPFNEDDPMSWTED
YLSWWPKPMEYRACYVKVKINGPHEINMRSRNQGGTHPKTVGQLYGLRDTRSIRDMDQST
VSAVCLEFKCSGMLYDQDRVDRTLVKVIPQGSCKRDNVNSMLQEYLVNHLPLAVNNDTNE
FTMLAPLDPLGHNYGIYTVTDQDPRTAKEIALGRCFDGTSDGTSRVMKSNEGVALTFTCG
DREVTRQSVFQALQNSPGQSLASAVRDGRGRKQRAGANALRNSRRRSTRNPTATRTSG
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atggcacggagccgaaccctgggctctgcactgagctgtataagagagagagcagcagga
caatcagcacagacacaacaccctgcatacagggaggagagagactacgcaacactacta
cacagagatactcacagggagttgctggaggtgttggtggagtattctttgtgttgtcgt
gcctggcgtgtgaaggtcattaccataaggtcagaggtcacaggtcagaggcaacagcag
agtgccaggatgtgctgcctatcaacatgggctttcctcctagctctgggagtcaccact
acggcacaaggaacatggaggagagacagtttgagagttgcgagacaaaacaaccctgca
gtgtaccactctgaagataactatgaatggaccacttggttcaacgtggaccaccctgga
ggtcgaggagactatgagcagttggatgctatccgtttctactaccgtgcgcgggtgtgt
gatgccccccaggccctggaggctcgtaccactgactggatccccgctcgcaacacgggg
gagaagatccacgaggacccttccctgggcttctggtgtgccaacgctgagcaggcccct
ggccgcaactgctccaactacgctgtgcgcttcctgtgccccaaaggcaacactgggtca
gaaggctctcaggatgcctggggtccttggtcagactggagtcattgctctgccaagtgt
ggtctggtggcaatgcaggtgcgctccaggaaatgccagtcccagcctaagcaatgggat
aagcagtgcagcggacctacagtggagggtagagcctgcaaaggacctgaatgccctggg
actggttgcacactgcactgtgagatgggtagggtgaatgcggagtgtgacacctgtatg
tgtcaggaccacattgtactgggctctgtccgcagtgctggaggtctccctgccccaggg
gccaccatcctccgcttcggccccagctccaaactcctcaccgtcaccgaccacaatgga
cacttccgcatcccagggatctgtcccgacggcaacgccacactgaccgtccagctgcgg
aaccacgcccctcacactgtcatcgtgccccacagcaccgaacgcacctctgtcctcagt
atcatgctgaatagagcagagaagctccatgtggtgaagaaccctgagaacaaggccaga
agagagggccagacagctgctctctgctgcaaagtgggtggatcaccagagccagaagat
taccagtggtttcacaacggcagcctgctggacgggaagcagctgaactatgacagcacg
ctggtcttaagaaacctgagcatggagcagactggggagtactactgcagagccagcaat
caggctggggccatcaagtccaaaccagccatagtcacagtcttaggtaaagatcaacct
tcatgtaacccaaaacccgaatcctaccttattcgcttacctcatgactgctatcaaaac
agcaccgactcactctattacgacgtaggaaagtgccactcagggacttgtgcaggacgg
ctggacaatggaatcaggtgcaaagactcagtggcttactgctgtggggtggcaaagatg
gaggagaaacaactgaaatgccagggctatgagctccctaccatggtggtgaccgaatgt
ggctgccagaagtgtgtggagaccaaggccattgtgcgtgggcgggctgtggccgcagac
actggggagcccatgagatttggtcacgtctacatcaatggagccagagtcagccgcaca
ggctacaaaggcaccttctccatccaggtcccccatgacactgaaaggctggtgatgacc
tttgtggacaacatggataagtttgtcaacaccaccaaggttcttccattcaacaccaaa
gggggcgccgtctaccatgagatcaagcttttgaggaagaaggaaccagtgaccatcagc
tcaacagagctcaacactcttcagctgggagaggtggagggccagaatcctattgctgag
atccagatcccacccaactccttctacaagcagagtggagaagtatttgtgggtaatgtg
aaggctagcatcacttttctggacgctagagacgtgtccacagcagcagccgcacagagt
gacctcaacttcataggagatgagggtgacaccttgcccctgagaacatacggtatgttc
tcagttgacttcagggacgaggaggctggagaaccactgaatgccggagaagtgaaggtg
aaaatggattcaacacaggtgaaaatgcccgagcacctggacaccatgaagctgtggtcc
ttgaaccccgacacaggcttgtgggaggaggagggggtcttccagatggagaagaagcaa
cgtggtaaaagggaagagaggaccttcctcattgggaacatggagatcagagagaggagg
ctgtttaacctggacgtcccagaaaacaggaggtgttacatcaaggtgcgaggcttccgc
agcgatcgcttcatgcctagtgagcaggtagagggagtggtggtgaccctgatcaacatg
gagcccactgcaggttactcctccaaccctcgtgcctggggacgctttgacagcgtcatc
actggccccaatggtgcctgtctgcctgccttctgcgacgaccagaaacctgacgcatat
tctgcccacgtcatggccaacatgggaggagaagaactcgaggcagtcccatctgctccc
aagtttaaccccaacatcattggagtccctcagccgtacctgggcaagctgaactacaga
cggtcagaccacaatgaccccaggttaaagaagacagccttcagcatcaatgtggccaag
cccagcccaaacacagctgaagagctcaatggacctgtgtactcatttgaccaactgaaa
gaatgtgaggaagccccatttactgcaggccacttccgcttcaccagagtggagggagat
cgctacgactacaacacagtgcctttcaacgaagacgatcctatgagctggacagaagat
tacctgagctggtggccaaagcccatggagtaccgagcctgctatgtcaaggtcaagatc
aatggtccccatgagatcaacatgcgctcccgaaaccagggcggcactcaccccaagacc
gttggccaactgtatggcctccgcgacacccgcagcatccgcgacatggaccagtccacc
gtctctgctgtgtgcctggagttcaagtgcagcggcatgctctatgaccaggaccgagtg
gaccgcactctggtgaaggtgatccctcagggcagctgtaagagggacaatgttaactcc
atgcttcaagagtacctggttaatcacctgcctctagccgtcaacaacgacaccaatgag
ttcacaatgctggcaccactggaccctctgggccacaactatggcatctacacagtgaca
gaccaggacccccgcactgccaaagagatagcactgggacgctgctttgatggcacctct
gacggtacttcccgtgtcatgaagagcaatgagggagtggcacttacctttacctgtggc
gaccgtgaggtgacccgtcaaagcgtgttccaggctctgcagaactcccccgggcagtct
ctggcgagtgcagtgagggatggccgaggcaggaagcagagagcaggagccaatgcactt
cgcaacagccgtagacgcagtactcggaatcccactgccacacgcacctcaggctaa
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