Salmo salar (Atlantic salmon): 106587331
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Entry
106587331 CDS
T04363
Name
(RefSeq) AP-1 complex subunit gamma-1
KO
K12391
AP-1 complex subunit gamma-1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
106587331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106587331
Membrane trafficking [BR:
sasa04131
]
Endosome - Golgi transport
Others
AP-1 complex
106587331
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Ortholog
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GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
INTS1_R4
Ltn1_1st
Motif
Other DBs
NCBI-GeneID:
106587331
NCBI-ProteinID:
XP_014031091
UniProt:
A0A1S3PTS5
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Position
ssa26:complement(20521979..20551247)
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AA seq
820 aa
AA seq
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MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLG
YPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQG
LALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATK
NLLSEKNHGVLHTSVVLLTEMCERSPDMLLHFRKNEKLVPQLVRILKNLIMSGYSPEHDV
SGISDPFLQVRILRLLRILGKSDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIM
DIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDL
DVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCDPEFKADCASGVFLAAEKYAPSKRW
HIDTIMRVLTTAGSYVRDDSVPNLIQLITNSVEMHAYTVQRLYKALLDDISQQPLVQVSS
WCIGEYGDLLVSGQCEEEEPIQVTEDEVLDVLEGLLVSNLSTPVTRGYSLTAIMKLSTRF
SSVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPIMEKTASNGPTEI
VQTNGETEPSVPDTKHPPLVTQPANQANDLLDLLGGNDVVPVIQTTLPTKPASAGGELLD
LLGDLSLSGGPAPAPSVPLSQPPFLLDGLSSQPLFNDISAAIPPMTAYSKNGLKIEFTFE
RANPNPNIAVITIHATNTTEADMTEFVFQAAVPKTFQLQLLSPSSNIVPALNQGSVTQVI
RVLNPQKQQLRMRVKLTYTHKGSPVQDLAEVNNFPPQSWQ
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgccgatcagactgcgggagctgatccggaccatccggacggctcggacccag
gcagaggagcgcgagatgatccagaaagagtgtgctgccatacgctcatccttcagagag
gaagacaacacttaccgctgtagaaatgtggctaagctactctacatgcacatgctgggc
tacccagcgcactttgggcagcttgagtgtctgaagttgattgcgtcccagaagttcact
gacaagcggatagggtacctgggagccatgctactgttggacgagaggcaggacgtccat
ctactaatgacaaactgcatcaagaatgatctgaatcacagtacacagtatgtccagggc
ctggccttgtgcaccctgggctgcatgggctcctcggagatgtgtcgagacctggctgga
gaggtggagaagctgctcaaaacatccaactcctacctgaggaaaaaggcggcattgtgt
gcagtccatgtcatcaggaaggtcccagagctgatggagatgttcctcccagccacaaag
aacctgctgagtgagaagaaccatggtgttctccacacttctgttgtcctcctcactgaa
atgtgtgaaagaagtcctgacatgctcttacacttcagaaagaatgagaagttggttcca
cagctggtgagaatcctgaagaacctgatcatgtctggatactctcctgagcacgatgtg
tctggcatcagtgaccccttcctgcaggtgcggatattgagactattgcgaattctgggc
aagagtgatgacgactcaagtgaagcaatgaatgacattcttgcacaggtggcaaccaac
accgagaccagtaaaaatgtaggcaatgcaatcctctacgagacagtactgaccataatg
gacatcaaatcagaaagtggattgagggtgttggccatcaacatactgggacgcttcctt
ctcaacaatgacaaaaatattagatatgtggcactgacgtccctactgaagactgtacag
acggaccacaatgcagtgcagaggcatcggagcaccattgtggactgtctaaaagacctg
gatgtgtccatcaagaggcgtgcgatggagctgagcttcgccctggtgaatgggaacaac
atccgaggcatgatgaaggagctgctctacttcctggactcctgtgacccagaattcaaa
gcggactgtgcatccggagtcttcctggctgcagagaagtatgcgccttcaaaaagatgg
cacattgacaccatcatgcgagtcctgacaacggcggggagctatgtccgagacgactct
gtccccaacctcatccagctcatcaccaacagtgtggagatgcatgcctacacggtgcag
agactctataaagccctgctggatgacatctcacagcaaccactggtccaggtgtcatcc
tggtgtataggggagtatggagacctgctggtatctggacagtgtgaggaggaggagccc
atccaggtgacagaggatgaagtcctggatgttttggaaggtcttcttgtgtccaacttg
tccacccctgtaacccggggttactccctcactgccatcatgaagctgtctactcgcttc
agcagtgtcaaccgaatcaagaaggtggtgtcaatatacggcagcagcatcgacgtggag
ctgcaacagagagctgtggagtacaatgcacttttcaagaaatatgatcacatgaggcct
gccttactagagcgaatgcccatcatggagaaaacagcctccaatggccctacagagatc
gtgcagaccaatggggagacagagccctcggtgcctgacacaaaacacccgcccctagtc
acccagccagccaaccaggctaatgacttgttagacctgctgggaggtaatgatgtggtg
cctgtgatccaaaccaccctgcccaccaagcctgcctcggctggaggagagctgctcgac
ctactgggggacctctcactgtctggtggtccagctcctgccccctctgtgcccctctcc
cagccccccttcctcctggatggcctctcctcacagcccctgtttaatgatatttcagca
gctattccccccatgacagcttatagcaagaatggcctgaaaatagagttcacctttgag
agggccaatccgaacccgaacatagcagtcatcactatccacgccaccaacaccaccgag
gctgacatgacagagtttgttttccaggctgcagtaccaaagacattccagctgcagctc
ttgtcccctagcagtaatattgtcccagcactcaaccagggaagtgtcacacaggtcatc
agagttctcaacccacagaagcaacaactccgcatgagggtcaagctgacgtacacccac
aaaggctcacctgtccaagacctggccgaggtcaacaacttccctcctcagtcctggcaa
tga
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