Salmo salar (Atlantic salmon): 106587416
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Entry
106587416 CDS
T04363
Name
(RefSeq) transcriptional repressor CTCF-like
KO
K23195
transcriptional repressor CTCF
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106587416
03036 Chromosome and associated proteins [BR:
sasa03036
]
106587416
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106587416
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
106587416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451
Zf-C2H2_ZNF451_C
zf-met
LIM
zf-C2HE
zf-C2H2_15
DTHCT
zf-C2H2_ZN142
Stm1_N
DUF7128
Motif
Other DBs
NCBI-GeneID:
106587416
NCBI-ProteinID:
XP_014031262
UniProt:
A0A1S3PUA8
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All DBs
Position
ssa26:complement(22139559..22151982)
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AA seq
798 aa
AA seq
DB search
MRARAPSITCMVMLQKHPQYRARHMRVNRVVSMEGEVVSIEPAQVEGLQDSGEGAELLQT
ADAALMEGGVAPQEVTGNVEMMVMDTLDSTLDPALLQMKTEVLEGGGTVTVTGGDEGQII
TLQVVNMEQTSAALGLGQLQLVQVPVTTATVEELQASFVDASAGNTEAEPVICHTLPLPE
GFQVVKVGANGEVETVEQEELQAAQDELQVIHREEEEEEEEAEPQVEDQTWSKDPDYQPT
AGIRKGKKGKKSRLRYGEGERDMDVSVYDFEEEQQEGMLSEVNAEKVVGNMKPPKPTKIK
KKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTG
TRPHKCQDCDMAFVTSGELVRHRRYKHTFEKPFKCSMCDYASVEVSKLKRHIRSHTGERP
FQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFH
CPHCDTVIARKSDLGVHLRKQHSFMEMGRKCRYCDAMFHERYALIQHQKSHKNEKRFKCD
QCDYCCRQERHMIMHRRTHTGEKPYACSQCEKTFRQKQLLDMHFKRYHDPNFIPTAFVCS
KCGKTFTRRNTMLRHAENCNGENTGDENGTPPKKGRRGRKRKMRSRRDDDDDDTEPELDD
IEEEEEELLAEIEVEQAPPVVPVPAPVGPPAKRKRGRPPKAKPAPTEAIIRVEDETTGEV
DDIIVKKEMKAEQASQEEEAVEDEEPAVEVEHAEGEPANQLEESFQGEEVVQEVALSVTE
APPNGDLTPEMILSMMDR
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcgagctccctctataacctgcatggtaatgttacaaaaacatccgcaatac
cgggcaagacacatgagggtgaatagggtcgtttctatggagggtgaagtcgtttccatt
gagcccgctcaggtcgagggtctccaggacagtggggagggagcagagctgctccagact
gcagatgctgccctgatggaggggggtgtggcaccccaagaggtgacggggaatgttgaa
atgatggtgatggacaccctggactcgacccttgaccctgccctgctacagatgaagact
gaggtccttgaagggggtggcacagtgacggtcaccgggggagacgagggacagatcatc
accctgcaggtggtgaacatggagcagacgagtgcagcactggggcttggacagctgcag
ctggtgcaggttcctgtcactacagccaccgtggaagagctccaggccagcttcgttgac
gcctcagcaggcaatactgaggcagagccagtgatctgccacaccctccctctgcctgag
ggcttccaggtggtgaaggtgggggcgaatggagaggtggagacagttgagcaggaagaa
ctgcaggcagcccaggatgagctccaggtgatccacagggaggaggaggaggaggaggag
gaagctgagccccaagtagaggaccagacatggtccaaagacccagattaccagccaact
gctggcatccgcaaggggaagaagggcaagaagagccgcctgcgttacggggagggggag
cgggacatggacgtgtctgtgtatgactttgaggaggagcagcaggaggggatgctctct
gaggtcaatgctgagaaggttgtgggcaacatgaagccgcccaaacccaccaagataaaa
aagaaaggtgtgaagaagacgttccagtgtgagctgtgtagctacacctgcccccggcgc
tctaacctggaccgccacatgaagagccacacagatgagaggccacacaaatgccatctg
tgtgggagggccttcagaacagtcacactgctgaggaaccacctcaacacacacacaggc
actcgtcctcataaatgccaagattgtgacatggcatttgtgaccagtggagagctggtg
cgtcatcgtcgctacaaacacacattcgagaaacccttcaagtgctccatgtgtgactac
gctagtgtggaggtgagtaagctgaagagacacatccgctcccatacaggcgagaggccc
ttccagtgcagtctgtgcagctacgccagccgagacacctacaaactgaagagacacatg
aggacacactcaggtgagaagccgtatgagtgctacatctgccatgctcgtttcacgcag
agcggcaccatgaagatgcacatcctgcagaagcacacagagaatgtggccaaattccac
tgtccccactgtgacacagtcatcgcccgcaagagcgacctgggtgtccacttgcggaag
cagcattcgttcatggagatgggcaggaagtgtcgttactgtgacgctatgttccacgag
cgttacgcactcatccagcaccagaaatcccacaagaacgagaagcgcttcaagtgcgac
cagtgtgactattgctgcagacaggagcgtcacatgatcatgcacagacgcacacacacg
ggggagaagccgtacgcctgcagccaatgtgagaaaaccttccggcagaagcagctgctg
gacatgcatttcaaacgttaccatgaccccaacttcatccccactgccttcgtctgcagc
aagtgtggcaagacctttactcgcaggaacaccatgctgcgtcacgcggagaactgtaac
ggagagaacaccggcgatgagaacggaaccccgccaaagaaaggccgccgtggcaggaag
aggaagatgcgctccagacgggatgacgacgatgacgacaccgagcctgagctggatgat
attgaggaagaggaggaggagctgctagctgagattgaggtggagcaggcacctccggtt
gtccctgtccctgcccctgttggcccgccagccaagaggaaacgtggaagacctcccaag
gccaaacctgccccaacggaggcaattatccgggtggaggatgagaccacaggcgaggtg
gatgacatcatcgtgaagaaagagatgaaagccgagcaggcgagccaggaggaagaagct
gtcgaggatgaggagccagcagtagaggtggagcatgctgaaggagagcctgccaatcag
ctagaagagtcattccagggggaggaggtggtgcaagaagtggcactgtctgtcacagag
gctccgcccaacggtgacctcactcctgaaatgattctcagtatgatggaccggtga
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integrated database retrieval system
