Salmo salar (Atlantic salmon): 106587434
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Entry
106587434 CDS
T04363
Name
(RefSeq) DNA-binding protein RFX7-like
KO
K09175
DNA-binding protein RFX7
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106587434
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Other basic domains
RF-X
106587434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX5_N
Pox_D5
Motif
Other DBs
NCBI-GeneID:
106587434
NCBI-ProteinID:
XP_014031302
UniProt:
A0A1S3PUE7
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All DBs
Position
ssa26:21826181..21877816
Genome browser
AA seq
1459 aa
AA seq
DB search
MTEDQQQHDQLPKLGSGISTLPSLVPGLQGTEASALQLKIKNSICKSVQTKVDNILQDVE
MFTDIEKLYLYLKLPSGPSNSEKRTERGSASPGELSCSDQSSMSSSRTQQMHAFNWIRNH
LEEHPETSLPKQEVYDEYKSYCDNLCYHPLSAADFGKIMKNVFPNMKARRLGMRGKSKYC
YSGLRKKAFVHMPSLPNLELHKTGDGCEVLEASGQLCSAEEEVRSAACGLVCEWAQKVLS
RQFDAVEDLARFLLNSHYIGTKSVAALTVMTGTPTGVKTPLPSSAFAPTAEAHFFQSQVK
TLPSPSIDAKQQLQRKIQKKQQEQMLHSPLPGEAQARRADGGTPGVGSITCRSPALLSPH
PTIGIMVAAVPSPITVQRSRQLMSPSPVGTSEGKILPVNFQVVTQSMQPVKCPKTPQNIP
ASPVGDRSARHRYAQILPKPSATSAITLRSPPTLLITNSPIKTVMQPTPHISSVNVVKMT
TISLAPNCSTTSTLTNTTLRPASAGMGSTVALEESRPSPRARSGSAAPILSPLARSGRAT
TTPTIDIKMMEGEAISEGSPALGASRLTMTQEAAGGQRAGGAVPRAASVPTPHTKGSLGL
EVMAGTKCNVKSSLSNNPVAATAGSNNNTNNESTLYLTVSNQNTSTTLSPNGGTVATSLI
ASKSPRKRTGVGPESYPTPVKRVFISQQPLGGSDGYRHGIGAGVKKLPRAGTPVRPESAP
AIGKVTVKLNSTVPTPILSLSDSPIETRGFQTVVKPQNSVQRRDTPTTMDTSSIGNVSAP
AGHARIQHPQHMTGNMQSMPNSSALLEQSAVSDLRNTMWVGGQLEGGKQQQQQAYAQQIT
DHKQVSTPVMEPLAMMGQAPASSQLSMQTDMDYFHFNDDDMTQDSIVEELVQMEEQMKLN
SSLQAFGADVTVQGHQSVMQGNMMSSNQTVTPYYQSVHSSTTPIHTPTPTPTSTSEMMGG
GQGLTRESPCSRMAPTTPVDSALGSSRHTPIGTPHSNCSGSVPPSPVECRNPFAFTPINS
SITGYHDGSIVSSSPVKPMQRPMATHPDKAKLEWMNNGYNNSGGNSINGISILPSYQDLV
DDHFRKPHAFAIPGQSYQSQTRHYGRLTPISPVQQQAASMANLNKQEGFAVPAPLDNKAT
STSSAGGTFRCRSVSPAVRQRNLSGNQGLQNIPRTVVSPFTSPVTPEMINIFANSHVDVS
VSSMAQRSQSVPVNVMMQTEVLPMQGQTNSKKITNVLLSKMDGDSDDAVRGLGINNLPSN
YTARMNLTQILETTPSFPSSANHQTLMTSNAQNAYEFQKPGYLMKNSRNEQMSLSAGDSQ
AQSATGEQQHQQRQPMLLSQKLQQQQQQQQLDFSTTVKDLLVDGSHTPGNRLVRQVSELN
AVGSDFRLTSDLSSSINDLNNLDTNLLFDPNQQQGQYEDSTLEELKNDPLFQQICSETAN
SNGFDWLESKDQPTVGLMG
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggatcaacaacaacatgatcagctcccgaagctgggctctggaataagcacc
ttaccatccctagttcctggactgcaagggactgaggccagtgcgttgcagctcaaaata
aagaattccatctgtaaatctgtacagacaaaggtggacaatattttgcaagatgtggag
atgtttacagacatcgagaaactctacctctaccttaagttgccttctggtcccagcaac
agtgaaaaaaggactgagagagggtctgccagtcctggagaactgtcatgcagtgatcag
agctccatgtcatcaagccgcactcagcagatgcacgcgttcaactggatccgcaatcac
ctagaggaacacccagaaacctctctgcccaaacaggaggtctatgacgagtacaagagc
tattgtgacaatctctgctaccacccactgagtgctgcggactttggaaagatcatgaaa
aatgtatttccaaacatgaaggcacgtcgacttggcatgagaggcaaatcaaaatactgc
tatagtggactgaggaagaaagcctttgtccacatgccatctttacccaacctggagtta
cataaaacaggggatgggtgtgaggtgctggaggcctcaggtcagctgtgcagtgcggag
gaagaggtgcgctctgcggcctgtggcctggtgtgtgagtgggcccagaaggtgctgagc
cgccagtttgatgctgtggaggacctggctcgcttcctcctcaacagccactacatcggc
accaaatctgtggcagccctcacggtcatgactggtacaccaacaggagttaaaacgcca
ctcccatcctcagcatttgcacctacagctgaagcccacttcttccagtcccaagtgaag
accctgccctctccctccatcgatgccaagcagcagctccagcggaagatccagaagaag
cagcaggagcagatgctgcactcccccctccccggagaagctcaggccaggcgggctgac
gggggcacgcctggggtcggctccattacctgtagaagcccagccctgctctccccacat
cccaccattggcattatggtagctgcagtccccagccccatcacggtacaaaggagcagg
cagctgatgtcccccagtcctgtgggaacatcggagggcaagattttgcctgtcaacttc
caagtggtgacccagtcaatgcagcctgtcaagtgtcccaagacccctcagaatatccca
gccagccctgtgggggaccgctctgcccggcaccggtatgcccagatcctgcctaaaccc
tcagccaccagcgccatcaccctgcgctcgccccccaccctgctcatcaccaacagcccc
atcaagaccgtgatgcagcccacaccccacatcagctctgtcaatgtggtcaagatgacc
accatatccctggctcccaactgcagcactacatccaccctaaccaacaccaccttaagg
cctgcctctgctggcatgggcagcactgtagccctggaggagagcagacccagcccacgg
gccaggagtggctctgcagcccctatcctatcccccttagccaggtcaggccgggccacc
accacccctaccatcgacatcaagatgatggagggtgaagccataagtgagggcagtccg
gccctgggtgctagcaggcttactatgactcaggaagctgcagggggccagagggctgga
ggagctgtaccaagggctgccagtgtgcccacgcctcacactaaaggctccctgggactg
gaggtaatggctggaaccaaatgcaacgtaaagtcctctttgagcaacaaccctgtggca
gctacagctggtagcaataataacaccaataacgaaagcactttgtatttgacggtctcc
aatcagaataccagcaccactctgtcacccaatggcggcactgttgccacatcactcatc
gcctctaagagccccaggaagcgcacaggcgtcggcccagagtcttatcccacgcctgtc
aaaagggtcttcatctcccagcagcctcttgggggttccgatggttacagacatgggatt
ggtgcaggagtgaagaaactccccagggcaggaaccccggtcagacctgaaagtgcacca
gccatcggtaaagttactgtgaaactgaactccactgtcccaactccaatcctgtcactc
tctgattcccccatcgaaaccagaggcttccagactgttgtcaagccacagaactccgtg
cagagaagagacactccgaccaccatggacactagcagcatcggcaacgttagtgccccg
gctggtcatgcacgaattcagcacccgcagcatatgacgggtaacatgcaatccatgccc
aacagctctgccctactggagcagtctgctgtgagtgacctaaggaacaccatgtgggtc
gggggccagctggagggaggtaagcaacagcagcagcaggcctacgcccagcagatcaca
gaccacaagcaggtatccacaccggtcatggagcccctggccatgatgggccaggcccca
gcctctagccagctctccatgcagacagacatggactacttccatttcaatgatgacgat
atgacccaggacagcattgtggaggagctggtgcagatggaggagcagatgaagctcaac
agcagtctgcaggccttcggagctgatgtgacagtgcaaggccatcagtctgtaatgcag
ggcaacatgatgtcctccaaccagacagtgaccccttactaccaatcagtacacagcagc
accacccctatccacacccctactccaactcccacatccacctctgagatgatgggagga
ggccagggcttgaccagggagagtccctgctcccgcatggcccctaccaccccagtggac
agtgccctggggagcagccgacacacccccatcggcactccacactccaactgcagcggc
agcgtgccccccagccctgtggagtgcaggaatccctttgccttcactcccattaactcc
agcattacaggctaccacgacggcagcattgtctccagcagccccgtcaagcccatgcag
aggcccatggctactcacccagacaaggccaaactggagtggatgaacaatggttacaac
aacagcggggggaactccatcaacggcataagtatcctccccagctatcaggacctggtt
gacgaccacttccgaaagccccatgccttcgccatccctggtcagtcctatcagtctcag
acgaggcactacggccgcctaacacccatctctccggtgcagcagcaggcagccagtatg
gccaacctgaacaagcaggagggcttcgctgtgcccgcccctctggacaacaaggccacc
agcacatcctcagcaggcgggaccttccgctgtcgtagtgtgagccctgccgtgcgccag
cgaaacctgagtggcaaccagggcctgcagaacatcccccgaacagtggtgtcccccttc
acctcccccgtgacccccgagatgatcaacatcttcgccaacagccatgtggatgtcagc
gtcagcagcatggcacagaggagccagtctgtgcctgtcaacgtgatgatgcagacggag
gtgctgcccatgcagggccagaccaacagcaaaaagatcaccaacgtgctcctgagcaag
atggacggggacagtgacgacgcggtgcggggcctgggcatcaacaacctgccgtccaac
tacacagcccgcatgaacctcacccagatcttagagaccacgcccagcttccccagcagt
gccaaccaccagactctgatgacttccaacgctcagaatgcgtacgagtttcaaaagcct
ggttacctcatgaagaactctaggaacgaacagatgagtctctcagcaggtgacagccaa
gcacaatcagctactggagaacagcagcatcagcagagacagccaatgttgctgtcccag
aaacttcagcaacaacagcagcagcagcagctagatttcagcaccaccgttaaagacctc
ttagtggacggcagccatactcctggcaatcggctcgtgagacaggtgtcagaactcaac
gctgtggggtctgattttcgactgacctctgatctttccagtagcatcaatgacctgaac
aatttggacacaaaccttctgtttgaccccaatcaacagcagggacaatatgaagactct
acactggaggaactgaagaatgatccactgttccagcagatttgcagtgagactgcgaat
tccaatggatttgattggctggaaagtaaagaccagcccacagtcgggttaatgggttaa
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integrated database retrieval system