Salmo salar (Atlantic salmon): 106587570
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Entry
106587570 CDS
T04363
Name
(RefSeq) Wilms tumor protein 1-interacting protein homolog
KO
K16682
LIM domain-containing protein
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
106587570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106587570
03036 Chromosome and associated proteins [BR:
sasa03036
]
106587570
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106587570
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
106587570
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
106587570
NCBI-ProteinID:
XP_014031562
UniProt:
A0A1S3PV54
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Position
ssa26:complement(29151540..29183048)
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AA seq
717 aa
AA seq
DB search
MDHYEEDLGLRASKLMEDLTLYEAYKDGMYSSRRDMVINPDLDFSSPTIPEQKSKTMNGS
SAPHQQIHSVENYMSGNKVYTAAPVRPVNGNRAVPVDYCTPQRDIVYPNEDSYCTKSEIA
LPCYSGASERHRRYSLEVQGHRYSTGSAYDGVVLNKPVPSPGNRCNSICVTTSHDGRYNA
TSPRSSFASSLSSQEQSKHASPRSSISSPRTSLVVPGQDKYTSPRSSLVHCEGSSALSPR
SSYASTASDTSKHSSPRASLNSYDCCSKPSSNRTSGISMGYDQRHISPRSSTASQYSCTT
SPRSSYSDSRYMPVGNHDLEGAVLHGMPVASPRSSICSQDGCARPGTIANSVVSPRSSIS
SHSSRSSRSSRGSMSTYPDLQLPSPRSSMLGTGLQEDILTQDCGDTNGVHNRIHLQALSG
MPEALPQHAPQQSTQAGMNTEVTAGSPSSSYGLHTKTPASGQRFKLPYQVTPCRESGPSQ
AERSLEALTLELEKELEMHMKKEYFGICIKCGKGVYGASQACQAMGNLYHTNCFTCCSCG
RRLRGKAFYNVNGKVYCEEDFLYSGFQQTAEKCFVCGHLIMEMILQALGKSYHPGCFRCV
VCTEGLDGVPFTVDVENNIYCVKDYHTVFAPKCASCNQPILPAQGSEETIRVVSMDKDYH
VECYHCEDCGLQLNDEEGHRCYPLDCHLLCHGCHIRRLKVPVPAHPPPSYPLHVTEL
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggatcactatgaggaagatttgggactccgggcgagtaaattaatggaggaccttacc
ttatatgaagcatacaaggatggaatgtacagttcaaggagggacatggttatcaacccc
gatttggatttttcgtctccaacgatacccgagcagaaaagtaagacaatgaatggcagc
tctgcgcctcaccaacagatacacagcgttgagaattacatgtctgggaataaagtgtac
actgcggctcccgtgcgccccgtgaatggcaacagagccgttcctgtggattattgcacc
cctcaaagagacatagtttatcctaatgaagatagctattgcaccaaatccgaaattgct
ttgccgtgttatagcggcgcgtccgagcggcacaggaggtactcattggaggtgcagggg
cataggtacagcactggtagcgcgtacgatggagtggttttgaacaagccagtaccctca
cctggcaacagatgcaacagtatctgtgttaccaccagccacgacggcagatacaatgct
accagcccgcggtccagtttcgcatcctccctctcctcccaggagcaaagtaaacatgca
agcccgaggtcgagcatcagtagcccgcgcacgagtttggtggtacccggtcaagacaag
tacactagtcccaggtccagtctggtacactgtgaagggagcagtgccctcagcccccgg
tctagctatgcaagtacagccagcgacacaagtaaacattccagcccaagggccagtctg
aacagctatgactgctgcagtaagcccagcagtaaccgcaccagcggcatcagtatgggc
tacgaccaaaggcacatcagccccaggtccagcacagcgagccagtattcttgtaccacc
agtccacgttctagctattcagattcgcgttacatgcctgtggggaaccatgatctggag
ggtgcagttttgcatggcatgccggtggccagtccccggtcaagcatctgcagccaggac
gggtgcgcaagacccgggacaatagctaacagtgtcgttagtccccggtccagtatctcc
agtcacagttccagaagttcccggagctccaggggatctatgagcacctacccagatctc
caactgccttcacccaggtcctcaatgctggggactggtttgcaggaggacatactaaca
caagattgtggcgataccaacggtgttcataatcgtatccatctccaagcgctctctggg
atgccagaggccctgccacagcatgcaccacaacagtcaacccaggcagggatgaataca
gaggtgaccgctggatcaccatcatcttcttatgggctccatacgaaaacaccagcctca
gggcagaggtttaaactaccttaccaggtgaccccatgccgggaaagtggcccaagccaa
gcagaaaggagtctggaagcactcaccttggagctggagaaggagttagaaatgcacatg
aaaaaagaatactttggtatctgtataaagtgtgggaagggtgtgtatggagccagccaa
gcctgtcaggccatggggaatctgtaccataccaactgcttcacctgttgctcctgtggg
aggaggctgagagggaaagctttctacaacgtcaacggcaaggtctactgtgaagaggac
ttcctatactctggctttcagcagacggcagagaagtgctttgtatgtggtcacctcatc
atggaaatgatcctacaggcactgggcaagtcctaccaccctggctgcttccgctgtgtg
gtctgcacagagggtctggacggagtgcctttcactgtggacgtggagaacaacatctac
tgtgttaaagactaccacacggtctttgccccaaaatgtgcctcatgcaaccagcccatc
ctccctgctcagggctctgaggagaccatccgggtggtgtccatggacaaggactaccat
gtggagtgctatcactgtgaggactgtggcctccagctaaacgacgaggagggtcaccgc
tgttaccccctggattgccacctgctctgtcatggctgccacatccgcaggctaaaggtc
ccggtgcccgcccacccgccccccagctacccactacacgtcactgagctgtga
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