Salmo salar (Atlantic salmon): 106588012
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Entry
106588012 CDS
T04363
Name
(RefSeq) nuclear receptor ROR-alpha-like
KO
K08532
RAR-related orphan receptor alpha
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106588012
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sasa03310
]
106588012
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
106588012
Nuclear receptors [BR:
sasa03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
106588012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
PHM7_ext
Motif
Other DBs
NCBI-GeneID:
106588012
NCBI-ProteinID:
XP_014032150
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All DBs
Position
ssa26:43692367..43710922
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AA seq
349 aa
AA seq
DB search
MSKKQRDSLYAEVQKHRLQQAQQLQRDLHPHQNPGEVEPLSPHYGLTDLHEALGGYMEEH
SPEGGNGPASKGGSDSGGAGGFYLDIQPSPDQSGLDINEHLGQNISKSHQETCQYLREEL
QSMSWQAFLQEEIETYQTKPEEVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVL
LKAGSLEVVFIRMCRAFDSQNGTVYFDGKYAGTDVFKALGCDDLIRLVFEFGKSMSVIHL
SEEEIALFSAYVLMSADRTWLQEKGKVEKLQQKIQLALQHVLQKNGREDLVLTKLICKVS
TLRALVSRHTEKLTAFRATYPDIVQAHFPPLYKELFGSDFEQGSMSIDG
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagaagcagagagacagcctgtacgctgaggtccagaaacaccgtctccagcag
gcccagcagctgcagagagacctccaccctcatcagaacccgggggaggtcgagcctctc
tctccccactacggcctcactgacctccacgaagccctgggagggtacatggaggaacac
agccccgaggggggtaacggcccagcctccaaggggggctctgactcaggaggagcgggg
gggttctacctggacattcagccatctcctgatcagtctggtctggatattaacgaacac
ctgggccagaacatctccaagtcccaccaggagacgtgtcagtacctgagggaggagctg
cagagcatgagctggcaggccttcctccaggaggagatagagacctaccagacgaagcca
gaggaggtgatgtggcagctgtgtgccatcaagataacggaggccatccagtacgtggtg
gagttcgccaaacgcatcgacggcttcatggagctctgtcagaacgaccagatagtgctg
ctcaaagcagggtctcttgaagtggtgttcatcagaatgtgtcgtgcctttgactctcag
aacggcaccgtctactttgatgggaaatacgccgggactgatgtcttcaaagcgttaggt
tgtgacgatctgatccgcctggtctttgagtttgggaagagtatgtctgtcatccatctc
tctgaggaggagatcgctctgttctcagcgtacgtcctgatgtctgcagatcggacgtgg
cttcaggagaaggggaaggtagagaagctgcaacagaagatccagctggctttacaacat
gtccttcagaagaatggcagagaggacctggttctcaccaagttgatatgcaaagtgtcg
accctgcgggcgttagtcagccggcatacagagaagctgacggccttcagagcaacctac
ccagacattgtccaagcccacttccctccactatacaaggagctgtttggctcagacttt
gaacagggctccatgtccatagacggctag
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