Salmo salar (Atlantic salmon): 106588091
Help
Entry
106588091 CDS
T04363
Symbol
THOC4
Name
(RefSeq) THO complex subunit 4-like
KO
K12881
THO complex subunit 4
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03013
Nucleocytoplasmic transport
sasa03015
mRNA surveillance pathway
sasa03040
Spliceosome
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106588091 (THOC4)
09122 Translation
03013 Nucleocytoplasmic transport
106588091 (THOC4)
03015 mRNA surveillance pathway
106588091 (THOC4)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106588091 (THOC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106588091 (THOC4)
03041 Spliceosome [BR:
sasa03041
]
106588091 (THOC4)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106588091 (THOC4)
TREX complex
106588091 (THOC4)
Spliceosome [BR:
sasa03041
]
Complex C
Other components
EJC/TREX
106588091 (THOC4)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106588091 (THOC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
106588091
NCBI-ProteinID:
XP_014032237
UniProt:
A0A1S3PX27
LinkDB
All DBs
Position
ssa02:45697515..45700404
Genome browser
AA seq
274 aa
AA seq
DB search
MADKMDMSLDDIIQQSKKGGGGRGNRGGRSRGSSGRGGSGGRPGGAVSGGRTGGSGPMRS
RQNFSGDRSDSRPTPYSRPRELPDKWQHDMFEGGFVGNAGGGGGAGGGGGVETGGKLLVS
NLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSQGTADVHFERRADALKAMKQYNNVPL
DGRAMSIQHVTSQIRDDNQRRPSQSSNGGGGGFNRDRIGRPNFSERRGGGDRRGGRGSRG
RGRGGRAGGGKPQQLSAEELDAQLDAYNAKMETS
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagatggatatgtctttggatgacattattcaacaaagtaagaaaggtgga
ggtggccgcggaaatcgaggaggccgcagccgaggatcatcgggtcggggtgggagtgga
ggccgacccggtggagctgtctctggaggccggacaggcggatccgggcccatgaggagt
cgacagaacttcagcggagacagaagcgacagcagacccacgccatacagcaggcccaga
gagcttccggacaaatggcaacacgacatgttcgaaggtggctttgtcggtaatgctggc
ggtggtgggggagcaggcggcggcggtggtgtagagactggcggcaagctccttgtctca
aaccttgacttcggtgtctctgacgctgatatccaggagttatttgcggaatttggtaca
ttgaaaaaagcggctgtgcactatgacaggtctggccgcagccagggaaccgctgacgtc
cactttgagaggagggctgatgcactcaaagccatgaaacagtacaacaacgtaccactc
gatggccgcgccatgagcattcagcacgtcacgtcacaaatcagagacgataaccagaga
cgaccttcacagagttcaaacggaggcggtggtggattcaacagagacagaattggacgc
cccaatttctcagaaaggcggggaggcggagacaggcggggaggcagaggctccaggggc
aggggtagaggcggacgtgctggtggaggcaaaccgcagcagttatctgctgaagagctg
gatgcccagttggatgcttacaatgccaagatggagaccagttag
DBGET
integrated database retrieval system