Salmo salar (Atlantic salmon): 106588265 Help Entry 106588265         CDS       T04363                                  Name (RefSeq) protein capicua homolog   KO K20225   capicua transcriptional repressor Organism sasa  Salmo salar (Atlantic salmon) Brite KEGG Orthology (KO) [BR:sasa00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:sasa03000]     106588265 Transcription factors [BR:sasa03000]  Eukaryotic type   beta-Scaffold factors with minor groove contacts    HMG SOX     106588265 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HTH_Cic_C DUF4819 HMG_box HMG_box_2 Zf_WRKY19 Motif Other DBs NCBI-GeneID:  106588265 NCBI-ProteinID:  XP_014032575 LinkDB All DBs Position ssa27:complement(9529709..9565072) Genome browser AA seq 2567 aa AA seqDB search MKPIKKQGRRSPPSTRAKGGKRRGTGDSGEKRDSDENRDRSPKSQTSPQTSSHSESSQEE SVTLTTMATPEREGHREGPRLPETTAAAAASLPGKSEDSRPGSVKSLSAHSTDSSSSTAS AANSPNPSSNRKTATFKARVPKKKYTSEHCAAAAAAAANHGNPGNTGAPPLNRNSAHCDS NAGSQLSSLSSGPGSAASEGGSLTDINSQTRRPVEDYITTIAPPQDRDNTPGPPPTGDRD RRGPEGGREISPSPVRCSSTDTASEHDLDVSEPHRSNSHHTNPTTEAHTLALVQRSTPHT PTPQSLSDALADALAKGLKNQRVLARQARRRTGKGEEENGGGGRESMDSVFRAGVVRRVS GEHGSLEVQLNGEKELYRYPFREGAQGPVDIIMDAPPPGSQAVPIGTPVCVPFGGNEDGG TTEAQRQWYREGLVTQVDSHPAVSYPYRVLLEDRVPPGDEEGDGRVGTPTAVWVSRQSLR LLVPPWDLDLGPCGGGREESDAAAKRGREREREKEDRDEIEVEQELCRLSRGMGLSAAVA GSVLGRLSYPGTAPASSSSSTVSSPVTPASVLSLVPGRDWEREKDLVDRERELQRKQERD NRERAKQHHHFMPLTPEEDIEVSHFSMVPMGAAGGAAKALTVSQHRHILSKPPPGYLSPH LSVVRSLGGTPLVGPHLALNPHPPPSPTVLLGLESGALAAGAAVIATPQLPPLSSSSSRG SLDKPPSSNSNSHGASGGGGGSCSSSTSSSRSRTPLTAAQQKYKKGDVVCTPTGIRKKFN GKQWRRLCSREGCSKESQRRGYCSRHLSMRTKEMEASGGGRDRGGASSTGTLTPSDLRLG GGRTSSEFDWDNTSRDSSEASSRGADSRPRLVLPSLLPQDLSRFDFDECEAATMLVSLGS SRSGTPSFSPISNQSPFSPTPSPSPSPLFVFRPATFSPITAPPSLTPRRHRHLSGTKMGT PGSERERHLSGIVPTFQTNLTFTVPMSPSKRKLDALPPPLPLSAQDYTKPDQQLGETIGL SPAAFRVLSPQSQPTTPSSLSFPRPRSATSRPPSSAASTPPPMLVSPTPPSPLPQDPSPR RVVPLRDSPVIVRNPDVPLAKFTDGPLVRRGGGGRSSREHSQPLHLATGLQAPVPINGTA TNGAVLLRNPASTLVLVTSSQSLTPAVAGHPAHSSPTLSGGSASISSTGSALSSSGSGGR EWERKPGGHQDAIGGALPQPVACHPSPTALLPLILPAESPHPAPRKDIIIGRPGTVWTNV EPRSVPVFPWHSLVPFLEPSQSSAAAQPADGQQLVNQSKEPRCGVALVSDGWVGPPDAEQ GSPSRPPPSSNDNDPPAGRAERGGADSETESDADDPFFPGVANDPAPSTGPIKRRTQSLS ALPKDGDRKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKE KQKYHDLAFQVKEAHFKAHPDWKWCNKDRRKSISEGRETPGAKEARERSMSESTEPESVS QGMEVKGAAGPDWPGGSERHAGAYSGQLPRPRAFSQSAVHSLERRERARDLEKLCREGAG SFRSRPPTLSLTQCGASEDVTSDEERMVICEEEGDDDVMEDSCPEGSIDLKCKERVTDSD EDEPDGQRAFQPVVRSSLPYATSTSHADSHSDSTKGNTGGSTGESSERKRKRGMEGGEEG SGESKRGGGGGQVPSNSIPGSAPFTSTPALGYGLTQVLGAVRMAPTMVTNVVCPIASTPI PITSKPMEGPIALSALPGEKKATLLIGGPGAVGGPITSGGGYLSSSSPNPVSVGPGGMQV TSLVLGGAFPNQSIQLIAPPQPLLSPTHSALPLPLPLLQPQFLPAASLTSAGGAKPGLTQ VQYILPILSSVSANPKSPSPQLTQQPTGVLTLPSTPSTHVSQTNGIHSGAGAGIRYAAVG GVSPGARVQAQSPVLQSKMLVPMATVRTGSTPPQPISHVAPPLPVQNGALPGNKIIQIAP MPMVQTNVHPAGAVHPGSPFPVSMATATVMTPGIKPPQNVLLTSPPTRITYVQSSTGVVS TATVQAPLSPGPAYLPSSLTTLGFTAIAPAGQALMQPLVAGQPPLLAPALSPGAPGTGRQ LLTAIYPAPSITLASGVVAMTSVPPNLAQEVSGQSSPSAVGVQGSKDVTRSHEEGMPHLT AEMEQKSQVEVQAQRKNKAQIKKEGIKKENTTEDVEAYSKTGANSMAMSSSNIPTGSEED GGRASHMKEENTDHDRDYARGNGEREIKKESGTPEPEESREAEDWPHEGHNKGDSGNGGH SKEAGLREPLHPPTGLDPPPPPPQTERDTPPSAKKTKFRPPPLKKPSDVVEKVLSGSYFE ERFAELPEFRPEEVLPSPTLQSLATSPRAILGSYRKKRRNSTDLDSSAEDPSSPRRKTAA RSRLSSCSSEPNTPKSEAKCEGDIFTFDRAGAESEDVLGEMDKVPYSSLRRTLDQRRALV MQLFHEHGFFPSAQATAAFQARYSDTFPTKLCLQLKIREVRQKIMQTATPGTPGISEPGG STTGVMGSTDSASAAISSSNTNTRDGTGTEPGERGRSPEEPRNVGKL NT seq 7704 nt NT seq  +upstreamnt  +downstreamnt atgaagccgattaaaaaacaaggaaggcgctcgcccccgtcgacccgagccaaagggggg aagagacgggggacgggggacagtggagagaaaagagactcggacgagaacagagaccga tcccccaaaagtcagacctcaccccaaacctcatctcactcagagtcttctcaggaggag tcggtgacactcacaacgatggccacgccagagagggagggccacagagaggggccccgg ctcccagagacaacggccgcagcagcagcttccctccctgggaagtcggaggactcccgc ccggggagcgtcaagtcgctgagcgcccacagcacagacagcagcagcagcaccgccagc gccgccaacagccccaacccctcgtcaaaccgcaagacggccaccttcaaggcccgcgtc cccaagaagaagtacacctctgagcactgtgctgccgccgccgccgccgccgccaaccac ggaaaccccggcaacaccggcgcgcctccactgaacagaaatagtgctcactgtgacagt aacgccggaagtcagttgtccagcttatcttcggggcccgggtcggcggcgagtgagggc ggttcgctcactgacatcaacagtcagaccaggagaccagtggaggactacattaccact atagctccaccacaggacagggacaacacacctggaccccctcccacaggggacagagac aggagaggcccagagggaggcagagaaatctcccccagccctgtccgctgctcctctaca gacacggccagcgaacacgacctggacgtgagcgagccacaccgctcaaactctcaccac accaaccccaccaccgaagcacacaccctggccctggtgcaacgtagcaccccgcacact ccgaccccacagagcctgtcggacgcgctcgccgacgccctggccaaaggtctaaagaac cagcgggtgctagccaggcaggctcggaggaggactgggaagggggaagaggagaacgga ggaggggggagggagagcatggactcagtgttcagagcgggcgtggtgcggcgggtgagc ggcgagcacggcagcctggaggtgcagctgaacggtgagaaggagctttaccgctacccg ttccgtgagggcgcccagggacccgtggacattatcatggatgccccgccgcccggctcc caagccgtccccatcggcacccctgtgtgcgtgcccttcggaggtaacgaggacggcggc accacagaggcccagcgccagtggtaccgagagggcctggtcacccaggtggactcccac ccggctgtgtcctacccctatagagtgttgttagaggatagagtgcccccaggggatgag gaaggggatggcagggtgggcactccgaccgctgtgtgggtgtcccgtcagagcctccgc ctgctggtgcccccctgggacctggacctgggaccctgcggaggggggcgagaggaaagc gatgccgccgccaagagagggcgagagagggagagagagaaagaggacagggacgagata gaggtggagcaggagctgtgtcgcctcagccgtgggatggggctcagcgcagccgtggct gggtccgtgttggggaggctttcataccctggaacggcccccgcctcctcgtcttcctcc actgtcagctcccccgtcacccctgcctcggtgctaagtctggtgcccggaagagactgg gagcgagagaaggacctggtggacagagagcgggagctccagaggaaacaagagagagat aaccgagagagggccaagcagcaccaccacttcatgcccctgacccccgaggaggacata gaggtgtcccacttcagcatggtgcccatgggggcggcgggaggggcggccaaggccctg acggtgtcccagcacaggcacatactctccaagccgcccccgggctacctcagcccccac ctgtccgtggtccggagcctcggaggcaccccgctggtgggcccccacctggccctcaac ccccacccccctccctcccctacggtgctactggggctggagtcgggagccctggcagcg ggggcggccgtcatcgccacccctcagctccctcctctgtcctcctcgtcctcccgcggc tccctggataagccgccctcttcaaactccaactcccacggtgcatctggagggggtgga ggctcgtgctcgagttcaacatcctcgtcgcgctcccgcaccccgctcacggcggcccag cagaagtacaagaagggcgacgtggtgtgtacccccacgggcatccgcaagaagttcaac ggcaagcagtggaggaggctgtgctccagagagggctgctctaaggagtcccagagaaga ggctactgctcgcgtcatctctccatgagaactaaagagatggaggccagcggagggggc agagaccgtggcggggccagcagtacgggcaccctaaccccgtcagacctgaggctgggc ggcggccggaccagttcggagttcgactgggacaacacgtcgcgagacagcagcgaagcg agcagtaggggagcggattcacgcccccgcctggtcctgccctcgctcctgccccaggac ttatcacgcttcgactttgatgagtgcgaggcggccacaatgctggtatctctgggcagc tcccgctcgggcacgccttccttctctcccatctccaaccagtcgcccttctcacccacg ccgtcgccctcgccttccccgcttttcgtcttccgcccggccaccttcagccccatcacg gcgccgccttcgctcacccctcgccgccaccgccacctgagcggcactaagatgggcacg ccgggctcggagcgcgagcgccacctgtcgggcatcgtacccaccttccagaccaacctc accttcaccgtgcccatgagccccagcaagcggaaacttgatgcccttcctccgcccctg cccctctctgcccaggattacactaagcccgaccagcagttaggggagactattggcctc agcccagccgccttcagggtgctctctcctcagagccagcccaccaccccctcctcccta tccttcccccggccccggagcgccaccagccgccccccatcctccgccgcctccaccccc ccgccaatgctggtgtcccccacccctccctcccccctgccccaggaccccagtccccgc cgtgtcgtgcccctgcgagactcccctgtcatcgtgcggaaccccgacgtccccctggcc aagttcacagatggacccctggtgaggaggggaggaggaggccgctcctccagagagcac agccagcccctgcaccttgccaccggcctccaagcacccgtgcccatcaacggcaccgcc accaatggcgcagtcctcctgcgaaaccccgcctccacccttgtccttgtaacctcctcc cagtccctgaccccagccgtcgccggacaccctgcccactccagccccaccctcagtggt ggctccgcctccatctcctctactggctccgccctctccagctctggatcgggaggtagg gagtgggagaggaagcccggcgggcaccaggatgccattggaggggcattgccccagccg gtagcctgccacccgtctccaaccgccctgctgcccctcatcctaccagccgagtcccct caccctgcaccccgcaaggacatcatcattggacggcccgggacagtatggaccaatgtg gagccccgttcagtgccagtgtttccttggcattcattggtccctttcctggagcccagc caatcgagtgcggctgcccagcccgctgatggccaacagcttgtcaatcagagcaaagag cctcgttgtggggtggccctagtgagtgacggatgggtgggtccaccagacgcagagcaa gggtctccatcccgcccaccaccctcctccaatgacaacgaccccccagctggaagagca gaaagaggtggagccgacagcgagacggagagcgacgcggacgacccgttttttccgggt gtagccaatgatcctgccccgtctacgggccctatcaagaggcgcactcagtccctcagc gcccttcccaaagatggagacagaaagagggaaaaggaccacattcggcggccgatgaac gcattcatgattttcagcaagcgtcaccgggcgctggttcaccagaggcaccccaaccag gacaaccgcacggtcagcaagatcctgggcgagtggtggtatgccctggggcccaaagag aagcagaagtaccacgacctcgccttccaggtgaaagaggctcacttcaaggcccaccca gactggaagtggtgcaacaaggacaggaggaagtctatctctgagggccgagagacccca ggggccaaagaggcacgcgagaggagcatgtcggagagcacagagcctgagtcagtgtct cagggcatggaggtgaagggtgcggcaggtccggactggcctgggggttctgagcgtcat gcgggggcctacagtggccagctccctcgcccccgggccttctcccagagtgcagtacac agcctggagaggagggagcgggccagagatctggagaagttgtgtcgagaaggggcaggc tcattccgcagccgcccccctactctctccctgacacagtgtggggccagcgaggacgtg accagtgacgaggagcgcatggtcatctgtgaggaagagggggacgatgatgtcatggag gactcgtgccctgagggatccatagacctcaagtgtaaagagcgagtgactgacagtgac gaggatgagccggatggacagcgagccttccagccagtggtccgctcctctctcccctat gccaccagcacctcccacgccgactctcactccgactctaccaaggggaacacagggggg agcaccggagagagctctgagaggaagagaaaacgagggatggagggaggagaagaggga agtggagaatccaaaagaggaggtggaggggggcaggttccctctaattccatccctgga tcagcgcccttcacctcgacccccgctctgggttatggactcacccaggtgctcggtgca gtccggatggcccccaccatggtgaccaacgtggtatgccccatcgccagcacgcccatc cctatcaccagcaagccaatggaaggccccatcgccctcagtgccctccctggggagaag aaagccacgcttctgattggaggaccgggagcagtaggcgggcctatcacttcagggggt gggtacttgtcctcatcctctcccaatcccgtgagtgtggggccgggggggatgcaggtc accagtctagtgctgggaggcgctttccccaaccagtctatacagcttatagccccgcct cagcctctcttaagccccacccacagcgccctgccacttcccctccccctgctgcagccc cagttccttcctgccgcctctctcacctccgctggcggtgccaagcctggcctcacccag gtgcagtacatcctgcccatcctgtcttctgtcagtgccaaccccaagagcccctcccct cagctaacccagcagccaaccggcgtcctcacgctgccctccactccgtccacccatgtc tcccagaccaatggaatacattcgggggcaggagcgggaataagatatgccgcagtggga ggggtcagtcctggagcaagagtccaagcccagtctccagtcttgcagagcaagatgttg gttcccatggcaacagtgagaacaggctctactcctcctcagcccatctcccacgtggcc cctccccttcctgtgcaaaatggtgctctaccaggaaacaagatcatccagatcgccccc atgccaatggtccagacaaatgtccaccctgctggagcagtgcatcctgggagtcctttc cctgtatccatggcaacagccactgtgatgactccgggcatcaaaccccctcagaacgtg ttgctgacctcgcctccaacaaggatcacttatgtccaatccagcactggagtggtctcc acggcaacggtccaggcccctctctcgccaggacccgcctacctgccatcgtccctgacg actctgggcttcaccgccattgctccggccggccaagccctgatgcagcctctcgtagcg ggccaaccgcccttgctagccccggccctttcccctggagcaccggggaccggacgtcaa ctcctcaccgccatctacccggccccaagcatcaccctggcgtcaggtgtggttgccatg acctccgtgccccccaatttggctcaagaagtgtccggccaatcgtcaccctcggctgtc ggcgtccagggttcaaaggacgtgacccggtcacatgaagagggaatgccacacctgact gcagagatggagcaaaagtcacaggtggaggtccaggcccaacggaagaacaaggctcag ataaagaaagagggcataaagaaagagaacacgacggaggatgtcgaggcatatagcaaa accggtgctaactcaatggctatgtccagcagcaatataccaacagggagtgaagaagac ggtggtcgagccagccacatgaaagaagagaatacggaccatgaccgagattatgccaga gggaatggggagagggagataaagaaagagagtgggacgcctgaaccagaggagtccagg gaggcagaggattggccccatgagggccacaacaaaggggacagtggcaacgggggccac agcaaagaggctggactgagggaacctctccaccctcccacaggactggaccctcctccg cctcccccacagactgaaagggacacccccccctcagccaagaagaccaaattccgcccc cctccactcaaaaagccctcagacgtcgttgaaaaggtcctgtcggggtcctatttcgag gagcgctttgccgagctgccagagttcaggccagaagaggtgctgccctctcccaccctc cagagtctggccacctccccccgagccatactgggcagctaccggaagaagaggagaaac tccacagacctggactcgtctgcggaggaccccagctctcccaggaggaagactgcagct cggagccgtctctccagctgcagctcggagcccaacacaccaaagagcgaggccaagtgt gagggggacatcttcaccttcgacagagctggtgctgagtctgaagatgtcttgggggag atggacaaagtgccgtactcctctctccggaggactctggaccagcgcagggctctcgtc atgcagctcttccatgaacacggcttcttcccttcagctcaggccactgcagccttccag gcacgctactcagacaccttccccaccaaactgtgtctgcagctgaagatcagggaggtg aggcagaagatcatgcagacagccacgcctgggacccccggaatctctgagcccggcggg tcaacaacaggggtcatgggttcaacggactccgcctcggccgccatcagttcctccaat accaacactcgagatggtacagggacggagccaggagaaagagggcggagtcccgaggag cccaggaacgtgggcaaattgtag

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