Salmo salar (Atlantic salmon): 106588336
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Entry
106588336 CDS
T04363
Name
(RefSeq) vacuolar protein sorting-associated protein 45-like
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106588336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106588336
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
106588336
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
B12-binding
Motif
Other DBs
NCBI-GeneID:
106588336
NCBI-ProteinID:
XP_014032688
UniProt:
A0A1S3PYA2
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Position
ssa27:11871871..11893150
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AA seq
569 aa
AA seq
DB search
MNVTLAVKQYISKMIENSGPGMKVLLMDKETTSIVSVVYTQSEILQKEVYLFERIDSQNR
DNMKHLKAICFLRPTKENVENLIQELRRPKYSVYFIYFSNVISKSEIKALAEADEQEVVA
EVQEFYGDFIAVNPHLFSLNLSGVARGRSWEPTLLPRTTQGLTSVLLALKKCPMIRYQLS
SDMAKRLGESVKQIITKEYELFDFRKTEVPPLLLIMDRSDDAITPLLNQWTYQAMVHELL
GLNNNRIDLSRVPGISKELKEVVLSAENDEFYANNLYLNFGEIGTNIKNLMEDFQKKKPK
EQQKLESISDMKAFVDNYPQFKKMSGTVSKHVTVVGELSRLVSERHLMEVSEVEQELACQ
NDHSSASQNVRRLLQNPRVSELDAVRLVMLYALRYERHSSSILPGLMEELNRKGVSERHR
RMVTSMVEYGGKRVRGSDLINPQDAVAITKQFFKGLKGVENVYTQHAPLLQETLDQLIKG
RLKDSQFPYLGPSSLRDRPQDIIVFVIGGATYEEALAVYNLNRTMPGVRIVLGGTTIHNT
KSFLEEVTLTAGAGQAERVQRAGGHPNRR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgacacttgctgtcaagcagtatatctccaaaatgatagaaaacagcgggcca
gggatgaaggttctactcatggataaagagacgaccagcatcgtcagtgtggtctacact
caatccgagatcctacagaaggaggtctacttgtttgaaagaatcgactcacagaatcga
gacaacatgaagcacctcaaagccatctgcttcctcaggccaaccaaggagaatgtggaa
aatctgatacaggagctccggcgaccaaagtacagtgtctacttcatctacttcagcaac
gtcatcagtaagagtgagataaaagccctggctgaggcggatgaacaggaggtggttgca
gaagtgcaggagttctatggagacttcattgctgtgaacccacaccttttctccctcaac
ctcagtggtgtggcaaggggtcgtagctgggagccaactctcctaccacgtaccacccag
ggtctgacctcagtgctgttggccctgaagaaatgtcccatgatccgctaccagctctcc
tcagacatggccaagagactgggagagagcgtgaagcaaatcatcaccaaggagtatgag
ctgtttgacttcaggaagacagaggtgcctcctctcctgctcatcatggaccgcagcgat
gacgccatcaccccactactcaaccagtggacgtaccaggccatggtgcatgagctgctt
ggcctcaacaacaaccgtattgacctgtcccgagtcccagggatcagcaaagagctgaag
gaggtggtgctgtctgcagagaacgatgagttctatgccaacaatctgtacctgaacttt
ggagagatcggcacaaacatcaagaacctgatggaggactttcagaagaagaagcccaag
gagcaacagaagctggagtccatctctgatatgaaggcctttgtggacaattacccccag
ttcaaaaagatgtctggcacagtgtcgaagcacgtgactgtggtgggcgagctgtctcgc
ctggtgagcgagaggcacctgatggaggtgtcagaggtggagcaggagcttgcctgccag
aatgaccactcaagcgcgtcacagaatgtgcgtcggctgctgcagaacccgcgggtgagc
gagctggacgcggtgcgcctggtgatgctgtacgcactgcgctacgagagacacagcagc
agcatcctgccgggcctcatggaggagctcaacaggaagggcgtgtcagagaggcatcgc
aggatggtaacgtccatggtggagtatggagggaagagggtgagaggaagtgacctcatc
aacccccaagacgcagtcgccatcaccaaacagttcttcaaggggctgaagggagttgag
aatgtgtacacgcagcatgcaccgttactgcaggagaccttggaccagctgatcaagggg
cggctgaaggacagtcagttcccttacctaggacccagctcccttcgagacaggccacag
gatatcatagtgttcgtcatcggaggggccacctatgaggaggcgctggcagtctacaac
ctgaaccgcaccatgccaggggttcggatcgtactgggcggcaccaccatccataacacc
aagagcttcctggaggaagtgacattgacggcgggtgcgggccaggccgagagggtgcag
agggcgggtggtcatcccaacagacgctga
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