Salmo salar (Atlantic salmon): 106588374
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Entry
106588374 CDS
T04363
Symbol
TNXB
Name
(RefSeq) tenascin-like
KO
K06252
tenascin
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
sasa04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106588374 (TNXB)
04518 Integrin signaling
106588374 (TNXB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106588374 (TNXB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sasa00536
]
106588374 (TNXB)
Glycosaminoglycan binding proteins [BR:
sasa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106588374 (TNXB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_TEN
Fibrinogen_C
EGF_Teneurin
fn3
EGF_Tenascin
EGF_2
hEGF
DUF7949
FN3_DSCAM-DSCAML_C
EGF
Fn3_Dep-1_3rd
PTPRCAP
Nop14
Ig_J
Motif
Other DBs
NCBI-GeneID:
106588374
NCBI-ProteinID:
XP_014032757
LinkDB
All DBs
Position
ssa27:10545507..10573903
Genome browser
AA seq
2094 aa
AA seq
DB search
MPLVPSFLLLLLACPALLTPSGSQSLQTGGQRAPRNTKPEGGGQPIKVVISEACVQGDSS
QNQGKELDLEPGSPLVLTHRIRLVPGSCGGGCEAEFAALRDRLERLEKEVSALREKCGGP
EGGCCTSQQSKGAECSIKPEGDECPNECSDQGRCEDGKCVCFPGFSGPDCSLSDCPGNCN
NKGKCVNGQCVCDPGFTGPDCSSESCPGNCNNKGLCVNGKCVCNTGFTGPDCSTKACPGN
CNNKGQCVNGQCVCNTGFTGPDCSTKACPGNCNNKGKCVNGKCVCDSGFTGPDCSTKSCP
GNCSNKGQCVNGKCVCNTGFTGPDCSTKACPGNCNNKGQCVNGQCVCNTGFTGPDCSTKA
CPGNCNNKGQCVNGKCVCDSGFTGPDCSTKSCPGNCSNRGKCVNGQCVCDSGFTGPDCSA
KACPNNCSNKGRCVNGKCVCEVGFTGQDCAAKGCPDNCSNKGRCVKGRCVCRRGFAVPDC
SQCEAGFTGADCGTAMSGVSQLNTKDVTESSVTLFWTPPPVQYDTYHVTFASQKEGDQQI
TSQVGGKLTAYTQTGLAAGQEYTVTINGEIDGRMGAESTAEFTTLISGPTNLQVVKTTTT
SAVVQWEQSQGDIDRYRLTVTPNQTDGTAKGRQDLTLPPERDSAQIDGLDPGHLYDITLV
AEKGGIKSKPATVQVTPGKSTKTISRVTMPVAPGVESHEGDSAGNTNPVKDIFHTKAKGE
EPERVKDWSGPGSVTVEGTNGTREDTSVRTSTRPLVNRNYRVIPKTGDRITLPRKPYIGG
SIHFNGTRVGQGGRRVGHSLLKKPTSRNPLVGPKVKKTLDTDSKPENPFVGDKTIALTVK
ETNLETSPLGEKYETLPKTYPVRILPVNATPSSGSEQTVIPGLKDLPDRKKDTEIEPGPG
TEGLEHTTTSEKNTTVHPNGKKCVNKVKLTHRKVNVTRRERVIGGRVNGTIVQSKPATEQ
GLAEKEDSALKVSETGDSKTTFQERNLVIHTQSEADDIPPHTTQSPTYPASSSPVSPTSY
MSLSSSAPAKHDESMTGMGQPMTDRDVVNAKTLPVPQSSNLPPEREPTSSSESEQNGKGP
SPSNPEDSYSGKDHVAVAEVGVSKDGEKTANVGLFGTKQNKTKTLRVGGSPPFRRLPPKG
PYQRRPNLNMRPFQNRTRSPFSAPTKQNESKTGTGQPMTDRQLVFPKTLAVSPAQSSTLP
PDAQPERAPKSSSESEHSGKSYSSSSSTSEESDLTKENVAVAEDGISRDGDRATDVVSSG
TERNRSKTLTLGSTPPLRRLPPKGTQQRRPHPNMGAFPNRTRTNLRPPQHPSRGPIRRPF
PPKLTNRDNGITIQTPQPGEQGTYSTSQNGTNTDLKPKTLLKKTNATAGKIARGQTYIRN
NSSLSQRGQDSKTGHPDQSSQVSKNADSRDSPNQINGSDVTTAGKTGQPLNSVGVQSITS
GGFILVWGAPEGMYRNFIVTREEHGSKNEAEKEEEKEEEEGGSESEEDRQEEGEAEGQTE
KENKGNEEESEMGVGQGKEGGEENTVTNSKSDNQRQSSDSNATAKVDDGGTIKFSKVLPG
SARSFPFQNLHPQTRYSLSVFGKGPGLHSKIHRLIVSTGPEPPSGLLFSEVTETSFSVSW
TKPNSPVSGFKVTYTHTQEGEPVSVMVDSGDSTLALSKLSPGSPYEVSVISVLGLDESDA
IKDLVMTLPDPPTDLQAINVTDTKALLLWRPALATVDRYVIVYGSEKGSDDVKITVSGNA
AEQQLKDLQGSTMYTVKVTSQLGNLDGAPAITVFTTTSGSEGDGEVPRDLKASQVTPRSA
LLTWKPPSAAVGSYKLTYQTEGQEMQEVTIDATVTEFKLTRLHPMSKYTVQLQGERGGSY
TAAISTEFTTGNLRYPFPSDCSQELLNGMRESGEVEIFPKGRQGKPVLVYCDQVTDGGGW
TVFQRRMDGKTDFFQGWKNYSKGFGELSGEFWLGNENLHNLTSMAPMTLRVDLRAGDESV
FAKYSTFMVDTVRRNYALKVSGYSGTAGDSMSYHNGRMFSTRDRDPAPFITRCAMSYRGG
WWYKNCHQANLNGLYDTNVNHQGLIWTAWKGKDYSVPFTEMKLRPTSFTPPTQG
NT seq
6285 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttgtcccatccttcctcctcctgctcctcgcctgccctgccctcctgacccca
tcaggttcccagagcctgcagactgggggtcaaagggcacccaggaacacaaagccagag
ggtggcgggcagccaatcaaagtggtgatctctgaggcgtgtgttcagggggactccagt
cagaatcagggaaaggaactggaccttgagcctggttcccctctagtccttacccatcgg
atccgactggttccggggtcgtgcggaggcgggtgcgaagccgagtttgctgccctgcga
gaccgtctggagaggctggagaaggaggtgtctgccctgagggagaagtgtggaggccca
gaggggggctgctgcacgtcccagcagagcaaaggcgctgagtgctccatcaagccggag
ggagacgagtgtcctaacgagtgcagtgaccagggacgctgtgaggacggcaagtgtgtc
tgcttcccagggttcagtgggccagactgcagtttgtctgactgccccggcaactgcaac
aacaaggggaagtgtgtgaatggccagtgtgtgtgcgacccaggtttcacagggccagac
tgctcttcagagtcctgtcctggtaactgtaacaacaaggggctatgtgtgaacggcaag
tgtgtgtgcaacactggcttcacaggccccgactgctccaccaaggcatgccctggtaac
tgtaacaacaaggggcaatgtgtgaatggccagtgtgtgtgcaacactggcttcacaggc
cccgactgctccaccaaggcatgccctggtaactgtaacaacaaggggaagtgtgtgaat
ggcaagtgtgtgtgtgatagcggttttacagggccagactgctccaccaagtcctgccct
ggcaactgcagcaacaaggggcaatgtgtgaacggcaagtgtgtgtgcaacactggcttc
acaggccccgactgctccaccaaggcatgccctggtaactgtaacaacaaggggcaatgt
gtgaatggccagtgtgtgtgcaacactggcttcacaggccccgactgctccaccaaggca
tgccctggtaactgtaacaacaaggggcaatgtgtgaatggcaagtgtgtgtgtgatagc
ggttttacagggccagactgctccaccaagtcctgccctggcaactgcagcaaccgtgga
aagtgtgtgaacggccagtgtgtctgcgatagcggctttacggggccggactgttccgcc
aaagcatgtcccaataactgcagcaacaagggaaggtgcgtgaacgggaagtgcgtgtgt
gaagtgggcttcactgggcaggactgcgccgctaagggctgtcccgataactgcagcaac
aaagggcgctgtgtgaaggggaggtgtgtgtgtcgccgtggtttcgccgtcccggactgc
agccagtgtgaagctgggttcactggagctgactgtggcaccgccatgtctggtgtgtcc
cagctcaacaccaaggacgtcactgaatcctctgtcaccctcttctggaccccacctcca
gtccagtatgacacctaccatgtcaccttcgccagccagaaagagggcgatcaacagata
acatctcaagttggaggcaagctcacggcctacacccaaacaggcttggcggccgggcag
gagtacacggtgacaatcaatggagaaatagatgggagaatgggcgctgagagcacagca
gaattcaccactcttatctctggtcccacaaaccttcaagttgtgaagacaaccacaaca
tctgcagttgtccaatgggaacaatcgcaaggagacatcgacaggtatcgcttaactgtt
acacccaatcagacagacggaacagccaagggaagacaagacctgaccctgccccctgag
agggactctgcccagattgacggtttggacccgggacatttgtatgacatcacattagtg
gctgaaaaaggcgggatcaagagcaagccagcaacagtccaagtcactcctggaaaatcc
acaaagacaatatccagggtgaccatgccggtagcaccaggagtagaaagccatgaggga
gactcagcagggaatacaaatcctgtgaaggacatcttccacacgaaggccaagggtgaa
gaaccagagagggtgaaggattggagtggaccaggctctgtaacagtcgaaggcaccaat
ggaaccagagaggacacatctgttagaaccagtacaagaccacttgtcaacagaaactac
agggttatacctaaaacaggtgatagaataaccttgcccaggaagccatacattggaggc
tctatccattttaatggtacaagagttggccagggtgggaggagagtgggtcacagtctt
ctgaaaaagcctacaagcagaaatcctttggtggggccaaaggtcaagaagaccttggat
actgactctaaaccagaaaatccctttgttggggacaagactatagccttaactgtgaaa
gaaactaacctggagacaagtcctcttggagaaaaatatgaaactttgccaaagacatat
cctgtcagaatccttcctgtaaatgccactccaagctctggttctgaacaaacagtgatt
cctggcttaaaggacctacccgatagaaaaaaagatacagagattgagccagggccaggg
acagagggtttggagcataccaccacatcagaaaaaaatactacggttcacccgaatggg
aagaaatgtgtcaacaaggttaaattgacacacaggaaagtcaatgtgacacgtagagag
agagtcattggagggagggtgaatggcacaatagttcaaagtaaacccgcaacagagcag
ggtttagctgaaaaagaggacagtgccctaaaagtgtctgaaacaggagattcaaagaca
acatttcaggagcgtaacctggtaattcacacacagagtgaagcagatgacattcctcca
cacaccacacaaagtcctacatatccagcttcctcttcaccagtatcacctacttcctac
atgtcactttcttcttcagctcccgcaaaacatgatgaatcaatgaccggcatgggtcaa
cctatgactgacagagacgtggtgaatgcaaagactttgcctgttccacaatcatccaac
ctccctccagagagggagccaacatcctccagtgaatcagaacaaaatggtaaaggacca
tctccctccaaccctgaggactcatactcaggtaaagatcatgttgcagtagcagaagtg
ggtgtcagcaaagatggagagaaaaccgctaacgtgggattgttcggaaccaaacaaaac
aagacaaagactctgagagtgggcggctcaccaccttttcgccgcctacctccaaagggg
ccctaccaacgccgcccgaacctaaatatgagaccgtttcaaaacaggacacgttcacct
ttttcagctcccacaaaacaaaatgaatcaaagaccggtacgggtcaacccatgactgac
agacaactagtgtttccaaagacattagcggtttccccagcacaatcctcaaccctccct
ccagatgctcagccagagagagcgccaaagtcctccagtgaatcagaacacagtggcaaa
agctattcatcatcatcctccacttcagaggaatcagacttaactaaagaaaatgttgct
gtggcagaggatggtatcagcagagatggggacagggcaactgacgtggtgtcgtctgga
actgaacggaacaggtcaaagactctgacactgggcagcacaccacccttacgccgtcta
cctccgaaggggacccagcaacgccgtccacacccaaatatgggcgcattcccaaacagg
acacgaacaaacctgagaccccctcagcatccatcaagaggccccatacgcaggcctttc
ccacctaaactgacaaacagggacaacggcatcaccattcaaacccctcaaccaggggag
cagggcacctacagcaccagccagaatggcacaaacacagaccttaagcccaaaactctc
ctcaagaaaacaaatgccacagctggtaaaatagcacgaggtcaaacatacataagaaat
aacagtagcttgagccaaaggggccaagattcaaaaacaggccatcctgaccaaagtagc
caagtgagtaagaatgctgactcaagagacagcccaaaccagataaatggatcagatgtc
actactgctggaaaaacaggccagcctctaaactcagtgggggttcaaagcataacctca
ggagggttcatactcgtttggggagcaccagaggggatgtacagaaatttcatagtaacc
cgggaagagcatggaagtaagaatgaggcagagaaagaggaggaaaaggaagaggaggag
ggggggagtgagtcagaggaggataggcaggaggaaggggaggcggagggacaaacagag
aaggagaacaaggggaatgaggaggaaagtgaaatgggggtgggccaaggtaaggagggc
ggggaggagaatactgttaccaatagcaaaagtgataaccaaagacagagcagcgacagt
aatgctacggctaaagttgatgacggtggtacaatcaaattctccaaagtccttcctggg
tcggctcgctcattcccattccagaatctccatccacagacccgctattccctgtccgtg
tttgggaagggtcccggactacactccaaaattcacagactcatcgtcagcacaggccca
gagcctccctcaggtcttctcttcagtgaagtgactgagacgtctttctctgtgtcctgg
accaagccaaacagtccagtgagtggcttcaaggtcacctacactcacacacaggaaggg
gagcctgtctccgtaatggtggactctggggattccacactggcactgtcaaagctctct
ccggggtccccctatgaggtcagtgtgatatccgtccttggactggacgagagcgatgca
atcaaagacctggttatgacactccctgaccctccaacggatctccaggccattaatgtc
acagacaccaaggccttgctgctatggcgaccagcactggcaacggttgaccgttatgtc
atagtttatggctctgaaaaagggtcagatgatgtgaagatcactgtgtcgggcaacgcg
gcggagcagcagctgaaggacctgcagggctccactatgtacaccgtcaaggtcaccagt
cagttgggcaacctggacggcgctcccgccatcactgtcttcaccaccaccagtggatcc
gagggagacggggaagtcccgcgtgacctgaaggccagtcaggtgactcctcgctcagcg
ttgctgacgtggaaaccaccctctgccgccgtgggaagctacaagctgacctatcagacg
gagggacaggagatgcaggaggttaccattgacgccacagtaacggagttcaagttgacc
aggctgcatcccatgtccaagtacaccgtgcagctacaaggggagaggggagggagctat
actgctgcaatttccactgagttcaccacagggaatctccggtaccccttcccaagtgac
tgttcccaggagctgctgaacgggatgcgtgagtctggagaggtggagatcttcccaaag
ggaaggcagggaaaaccagtgttggtctactgcgaccaggtgactgatggaggcggctgg
acggtcttccagagaaggatggatgggaaaactgacttcttccaaggttggaagaactac
agcaaaggatttggagaactgagtggggaattttggctgggtaatgagaacctacacaat
ctaaccagcatggcaccaatgaccctacgtgtggacctccgtgcaggggacgaatccgtg
tttgccaagtactccacgttcatggtggacactgttaggaggaactacgctctcaaagtg
tctgggtacagcggtacagcaggtgactctatgagttaccacaacgggcgcatgttctct
accagagacagagaccccgcgcctttcatcacccgctgcgccatgtcctatagggggggt
tggtggtataagaactgccaccaggccaaccttaatggcctctacgacaccaatgtcaat
caccagggtttgatctggactgcctggaaaggcaaggattattccgtccctttcactgag
atgaagctcagaccaacatctttcacccctccaactcaggggtaa
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integrated database retrieval system