KEGG   Salmo salar (Atlantic salmon): 106588405
Entry
106588405         CDS       T04363                                 
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
  KO
K10652  tripartite motif-containing protein 25 [EC:2.3.2.27]
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    106588405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sasa04121]
    106588405
Enzymes [BR:sasa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106588405
Ubiquitin system [BR:sasa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    106588405
SSDB
Motif
Pfam: SPRY PRY zf-RING_UBOX zf-RING_2 zf-C3HC4_2 zf-C3HC4_3 zf-B_box zf-C3HC4 zf-C3HC4_4 zf-RING_5 ANCHR-like_BBOX U-box
Other DBs
NCBI-GeneID: 106588405
NCBI-ProteinID: XP_014032825
UniProt: A0A1S3PYN9
LinkDB
Position
ssa02:complement(44299781..44314772)
AA seq 658 aa
MAEDMFSLMNLEDELSCSICLCAFDCPVTIPCGHNFCQECLLETWKDNYSCPQCRTHFTT
KPELKKNTVLSTVVETFKMKSNKSALPSEMGDLIMWDAVKMEPKEVVILCDTCMEAKAFK
TCLTCMASFCLEHVRPHHENPVFGAHQLNEPLGDLRDRICPDHHKLMEFYCVQHGRCICG
VCLQQVHKGCTFSNPDEQRALQESDLRGKLSLLDGKIDKNQMVISQMSDQQSMLKDSAAS
RKRALEDEYRQIRELLDRDEREALNTVDREQESGQTKLQNLMKKFNQNIVKLSAAKDDIN
SLLSQTQTVAFLQASVDMPAVVAFDPYTPKVNLDSKALAVWHAYSAVLREHLTHVLKQPV
EARLQILKPAERFGPPLLPNFHEMGGMPPQGHPGMRRSHSPGAPLRANQRKKPPHDSNRG
RKNPQKPPNAPREFTTTVPHTPRDHPRGQSAEPRPRNREDPGQPNVPPSITSAAKRTDLL
QYGTVLTLDPKTAHKRIALTENMTVASVSDEPTPYPDGPARFSVCSQVLTSKGFSRGRHY
WEVKMSSNNFTGIGLAYNSIDRKGPASRLGRNAQSWCVEWFNVKLSAWHASSETVLQNPN
PTRVGVLLDCEEGTATFYNIQERAYPFHTFVFQFAEAVYPAFWLFSSGSSISLCKLQS
NT seq 1977 nt   +upstreamnt  +downstreamnt
atggcggaggatatgttttccctcatgaatctcgaagacgaactgagctgtagcatctgc
ctctgtgctttcgactgtccggtgacaattccatgtggacacaacttttgccaagagtgt
ctcctagaaacctggaaagacaactacagctgtccacaatgccggacccacttcaccacc
aaaccagagctgaagaagaacaccgtcctcagcactgttgtggaaacgttcaaaatgaag
tcgaataaaagcgccctccccagtgagatgggcgacttaatcatgtgggatgcggtcaag
atggagcccaaagaggtggttatcttgtgcgacacctgtatggaagccaaagcattcaaa
acctgcctcacctgtatggcgtcgttctgccttgagcacgtgaggcctcatcatgagaac
ccagtgtttggcgcgcatcagctgaacgagcctctgggcgacctgcgcgaccgtatctgc
cccgaccaccacaagctgatggagttctactgtgtccaacatggccgctgtatctgtggt
gtctgtctgcagcaggtgcataaaggctgtaccttctccaaccctgatgaacaacgggca
ctgcaagagtctgatttgaggggcaagttgagtctgctggatggaaagattgacaagaac
cagatggtcatttctcagatgagtgaccagcagagcatgttgaaggactctgcagccagc
aggaagagagctctggaggacgagtaccgccaaatccgcgagctgctggaccgtgatgag
cgtgaggctctgaacactgtggaccgcgagcaggagagcggtcaaaccaaactccagaac
ctcatgaagaagttcaaccagaacattgtgaagcttagcgcagcaaaagatgacatcaac
agcctgctcagtcagactcagaccgtggctttcctacaggcctcagttgacatgccggca
gtggtggcctttgacccctataccccgaaggtcaacctggactctaaggccttggcagtc
tggcatgcctactctgcagtcctgagggagcatctcacacatgtactgaaacagcctgta
gaggccagactgcagatactcaaaccagctgagaggtttggtcctcctctgctgccaaac
ttccatgaaatgggaggcatgccaccacaaggtcatccgggaatgcgtagatcccacagc
ccaggagcccccctcagggcaaaccagaggaagaagcctccacacgattcaaaccgaggg
agaaaaaatccccaaaagccacctaatgctcccagagagtttaccacaactgttccacac
acaccaagggaccaccccagaggacagtcagcagaacccagacccaggaacagagaggac
ccaggacaaccaaatgttcccccaagtatcacgtctgcagcaaaacgaactgaccttcta
caatatggcacggttctcacccttgaccccaaaacggcccacaagcgcatcgccctcaca
gagaacatgaccgtggcctctgtgtcagacgagcccaccccttaccccgatggccccgcc
cgtttctccgtctgcagccaggtactcacttccaagggcttctcccgcggccgccactat
tgggaggtcaagatgagcagcaacaacttcaccggcatcggcctggcctacaacagcatc
gaccggaagggtccggctagccggctggggcgtaacgcccagtcctggtgcgtggagtgg
ttcaacgtcaagctgtcggcctggcacgccagcagtgagactgtactgcagaacccgaat
ccgacccgcgtcggcgtgctactggattgcgaagagggaacggccactttctataacata
caggaacgggcataccctttccatacatttgtgttccagttcgccgaggcagtgtacccg
gcgttctggcttttctccagcggctcatctattagcctgtgcaagctgcagtcttga

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