Salmo salar (Atlantic salmon): 106588405
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Entry
106588405 CDS
T04363
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
106588405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106588405
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106588405
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106588405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-B_box
zf-C3HC4
zf-C3HC4_4
zf-RING_5
ANCHR-like_BBOX
U-box
Motif
Other DBs
NCBI-GeneID:
106588405
NCBI-ProteinID:
XP_014032825
UniProt:
A0A1S3PYN9
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All DBs
Position
ssa02:complement(44299781..44314772)
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AA seq
658 aa
AA seq
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MAEDMFSLMNLEDELSCSICLCAFDCPVTIPCGHNFCQECLLETWKDNYSCPQCRTHFTT
KPELKKNTVLSTVVETFKMKSNKSALPSEMGDLIMWDAVKMEPKEVVILCDTCMEAKAFK
TCLTCMASFCLEHVRPHHENPVFGAHQLNEPLGDLRDRICPDHHKLMEFYCVQHGRCICG
VCLQQVHKGCTFSNPDEQRALQESDLRGKLSLLDGKIDKNQMVISQMSDQQSMLKDSAAS
RKRALEDEYRQIRELLDRDEREALNTVDREQESGQTKLQNLMKKFNQNIVKLSAAKDDIN
SLLSQTQTVAFLQASVDMPAVVAFDPYTPKVNLDSKALAVWHAYSAVLREHLTHVLKQPV
EARLQILKPAERFGPPLLPNFHEMGGMPPQGHPGMRRSHSPGAPLRANQRKKPPHDSNRG
RKNPQKPPNAPREFTTTVPHTPRDHPRGQSAEPRPRNREDPGQPNVPPSITSAAKRTDLL
QYGTVLTLDPKTAHKRIALTENMTVASVSDEPTPYPDGPARFSVCSQVLTSKGFSRGRHY
WEVKMSSNNFTGIGLAYNSIDRKGPASRLGRNAQSWCVEWFNVKLSAWHASSETVLQNPN
PTRVGVLLDCEEGTATFYNIQERAYPFHTFVFQFAEAVYPAFWLFSSGSSISLCKLQS
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggatatgttttccctcatgaatctcgaagacgaactgagctgtagcatctgc
ctctgtgctttcgactgtccggtgacaattccatgtggacacaacttttgccaagagtgt
ctcctagaaacctggaaagacaactacagctgtccacaatgccggacccacttcaccacc
aaaccagagctgaagaagaacaccgtcctcagcactgttgtggaaacgttcaaaatgaag
tcgaataaaagcgccctccccagtgagatgggcgacttaatcatgtgggatgcggtcaag
atggagcccaaagaggtggttatcttgtgcgacacctgtatggaagccaaagcattcaaa
acctgcctcacctgtatggcgtcgttctgccttgagcacgtgaggcctcatcatgagaac
ccagtgtttggcgcgcatcagctgaacgagcctctgggcgacctgcgcgaccgtatctgc
cccgaccaccacaagctgatggagttctactgtgtccaacatggccgctgtatctgtggt
gtctgtctgcagcaggtgcataaaggctgtaccttctccaaccctgatgaacaacgggca
ctgcaagagtctgatttgaggggcaagttgagtctgctggatggaaagattgacaagaac
cagatggtcatttctcagatgagtgaccagcagagcatgttgaaggactctgcagccagc
aggaagagagctctggaggacgagtaccgccaaatccgcgagctgctggaccgtgatgag
cgtgaggctctgaacactgtggaccgcgagcaggagagcggtcaaaccaaactccagaac
ctcatgaagaagttcaaccagaacattgtgaagcttagcgcagcaaaagatgacatcaac
agcctgctcagtcagactcagaccgtggctttcctacaggcctcagttgacatgccggca
gtggtggcctttgacccctataccccgaaggtcaacctggactctaaggccttggcagtc
tggcatgcctactctgcagtcctgagggagcatctcacacatgtactgaaacagcctgta
gaggccagactgcagatactcaaaccagctgagaggtttggtcctcctctgctgccaaac
ttccatgaaatgggaggcatgccaccacaaggtcatccgggaatgcgtagatcccacagc
ccaggagcccccctcagggcaaaccagaggaagaagcctccacacgattcaaaccgaggg
agaaaaaatccccaaaagccacctaatgctcccagagagtttaccacaactgttccacac
acaccaagggaccaccccagaggacagtcagcagaacccagacccaggaacagagaggac
ccaggacaaccaaatgttcccccaagtatcacgtctgcagcaaaacgaactgaccttcta
caatatggcacggttctcacccttgaccccaaaacggcccacaagcgcatcgccctcaca
gagaacatgaccgtggcctctgtgtcagacgagcccaccccttaccccgatggccccgcc
cgtttctccgtctgcagccaggtactcacttccaagggcttctcccgcggccgccactat
tgggaggtcaagatgagcagcaacaacttcaccggcatcggcctggcctacaacagcatc
gaccggaagggtccggctagccggctggggcgtaacgcccagtcctggtgcgtggagtgg
ttcaacgtcaagctgtcggcctggcacgccagcagtgagactgtactgcagaacccgaat
ccgacccgcgtcggcgtgctactggattgcgaagagggaacggccactttctataacata
caggaacgggcataccctttccatacatttgtgttccagttcgccgaggcagtgtacccg
gcgttctggcttttctccagcggctcatctattagcctgtgcaagctgcagtcttga
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integrated database retrieval system