KEGG   Salmo salar (Atlantic salmon): 106588478
Entry
106588478         CDS       T04363                                 
Symbol
EF1A
Name
(RefSeq) elongation factor 1-alpha-like
  KO
K03231  elongation factor 1-alpha
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106588478 (EF1A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sasa03019]
    106588478 (EF1A)
   03016 Transfer RNA biogenesis [BR:sasa03016]
    106588478 (EF1A)
   03012 Translation factors [BR:sasa03012]
    106588478 (EF1A)
   04131 Membrane trafficking [BR:sasa04131]
    106588478 (EF1A)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sasa04147]
    106588478 (EF1A)
Messenger RNA biogenesis [BR:sasa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     106588478 (EF1A)
Transfer RNA biogenesis [BR:sasa03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    106588478 (EF1A)
Translation factors [BR:sasa03012]
 Eukaryotic type
  Elongation factors
   106588478 (EF1A)
Membrane trafficking [BR:sasa04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    106588478 (EF1A)
Exosome [BR:sasa04147]
 Exosomal proteins
  Proteins found in most exosomes
   106588478 (EF1A)
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 Gtr1_RagA FcpA
Other DBs
NCBI-GeneID: 106588478
NCBI-ProteinID: XP_014033037
UniProt: C0H9C3 A0A1S3PZB5
LinkDB
Position
ssa27:7789359..7793357
AA seq 462 aa
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLVVAGGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFEEIQKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEASPNMGWFKGWKVERKEGGANGVTLLEALDSILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMIVTFAPANVTTEVKSVEMHHETLE
AALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGNFTAQVIILNHPGTISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIIVMVPGKPMCVESFAAYPP
LGRFAVRDMRQTVAVGVIKAVDKKAASTGKVTKSAVKAAKAK
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgggaaaggaaaagatccacatcaacatcgtggtcattggccatgtcgactccggcaag
tccaccaccaccggccatctgatctacaaatgcggaggtattgacaagagaaccattgag
aagttcgagaaggaggctgctgagatgggcaaaggctctttcaagtatgcctgggtgctg
gacaagctgaaggctgagcgagagcgtggtatcaccatcgacatttccctgtggaagttt
gagaccgccaagtactacgtcacaatcattgatgcccccggacacagagacttcattaag
aacatgatcactggtacctctcaggctgattgcgctgtgctggtcgttgctggtggtgtt
ggtgagtttgaggccggtatctcaaagaacgggcagactcgtgagcacgctctcctggcc
tacactctgggagtgaagcagctcatcgttggcgtcaacaagatggactccacagagccc
ccctacagccagaagcgttttgaggaaatccagaaggaggtcagcacctacatcaagaag
atcggctataaccctgccacagtcgcctttgtgcccatctcaggatggcatggggacaac
atgctggaggctagccctaacatgggctggttcaagggatggaaggttgagcgtaaggag
ggtggcgctaacggtgtgacccttctggaggctctggactctatcctgcccccctcccgc
cccactgacaagcccctccgtctgcccctgcaggacgtctacaaaattggaggtattgga
actgtacctgtgggccgtgtggagactggaaccctgaaggctggtatgatcgtcaccttc
gcccccgctaacgtcaccactgaagtcaagtctgtggagatgcaccacgagaccctggaa
gcggctctccccggtgacaacgtcggcttcaacgtcaagaacgtgtccgtcaaggatatc
cgtcgtggcaacgtggccggagacagcaagaacgaccctccaatggaggccggcaacttc
accgctcaggtcatcatcctgaaccacccgggcaccatctcccagggctatgcccccgtg
ctggattgccataccgctcacattgcctgcaagttcagcgagctcaaagagaagatcgat
cgtcgttccggcaagaagcttgaggacaaccccaaggccctgaagtctggagacgccgcc
atcatcgtcatggtgccaggaaagcccatgtgtgtggagagcttcgccgcctaccctccc
ctcggtcgtttcgccgtacgtgacatgaggcagaccgtggctgttggtgtcatcaaggcc
gtcgacaagaaggctgccagcactggcaaggtgaccaagtccgccgttaaggccgccaaa
gccaaatga

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