Salmo salar (Atlantic salmon): 106588478
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Entry
106588478 CDS
T04363
Symbol
EF1A
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106588478 (EF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106588478 (EF1A)
03016 Transfer RNA biogenesis [BR:
sasa03016
]
106588478 (EF1A)
03012 Translation factors [BR:
sasa03012
]
106588478 (EF1A)
04131 Membrane trafficking [BR:
sasa04131
]
106588478 (EF1A)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106588478 (EF1A)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
106588478 (EF1A)
Transfer RNA biogenesis [BR:
sasa03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
106588478 (EF1A)
Translation factors [BR:
sasa03012
]
Eukaryotic type
Elongation factors
106588478 (EF1A)
Membrane trafficking [BR:
sasa04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
106588478 (EF1A)
Exosome [BR:
sasa04147
]
Exosomal proteins
Proteins found in most exosomes
106588478 (EF1A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
FcpA
Motif
Other DBs
NCBI-GeneID:
106588478
NCBI-ProteinID:
XP_014033037
UniProt:
C0H9C3
A0A1S3PZB5
LinkDB
All DBs
Position
ssa27:7789359..7793357
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLVVAGGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFEEIQKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEASPNMGWFKGWKVERKEGGANGVTLLEALDSILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMIVTFAPANVTTEVKSVEMHHETLE
AALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGNFTAQVIILNHPGTISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIIVMVPGKPMCVESFAAYPP
LGRFAVRDMRQTVAVGVIKAVDKKAASTGKVTKSAVKAAKAK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagatccacatcaacatcgtggtcattggccatgtcgactccggcaag
tccaccaccaccggccatctgatctacaaatgcggaggtattgacaagagaaccattgag
aagttcgagaaggaggctgctgagatgggcaaaggctctttcaagtatgcctgggtgctg
gacaagctgaaggctgagcgagagcgtggtatcaccatcgacatttccctgtggaagttt
gagaccgccaagtactacgtcacaatcattgatgcccccggacacagagacttcattaag
aacatgatcactggtacctctcaggctgattgcgctgtgctggtcgttgctggtggtgtt
ggtgagtttgaggccggtatctcaaagaacgggcagactcgtgagcacgctctcctggcc
tacactctgggagtgaagcagctcatcgttggcgtcaacaagatggactccacagagccc
ccctacagccagaagcgttttgaggaaatccagaaggaggtcagcacctacatcaagaag
atcggctataaccctgccacagtcgcctttgtgcccatctcaggatggcatggggacaac
atgctggaggctagccctaacatgggctggttcaagggatggaaggttgagcgtaaggag
ggtggcgctaacggtgtgacccttctggaggctctggactctatcctgcccccctcccgc
cccactgacaagcccctccgtctgcccctgcaggacgtctacaaaattggaggtattgga
actgtacctgtgggccgtgtggagactggaaccctgaaggctggtatgatcgtcaccttc
gcccccgctaacgtcaccactgaagtcaagtctgtggagatgcaccacgagaccctggaa
gcggctctccccggtgacaacgtcggcttcaacgtcaagaacgtgtccgtcaaggatatc
cgtcgtggcaacgtggccggagacagcaagaacgaccctccaatggaggccggcaacttc
accgctcaggtcatcatcctgaaccacccgggcaccatctcccagggctatgcccccgtg
ctggattgccataccgctcacattgcctgcaagttcagcgagctcaaagagaagatcgat
cgtcgttccggcaagaagcttgaggacaaccccaaggccctgaagtctggagacgccgcc
atcatcgtcatggtgccaggaaagcccatgtgtgtggagagcttcgccgcctaccctccc
ctcggtcgtttcgccgtacgtgacatgaggcagaccgtggctgttggtgtcatcaaggcc
gtcgacaagaaggctgccagcactggcaaggtgaccaagtccgccgttaaggccgccaaa
gccaaatga
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