Salmo salar (Atlantic salmon): 106588584
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Entry
106588584 CDS
T04363
Name
(RefSeq) partitioning defective 6 homolog gamma-like
KO
K06093
partitioning defective protein 6
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04144
Endocytosis
sasa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106588584
09144 Cellular community - eukaryotes
04530 Tight junction
106588584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106588584
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
106588584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
106588584
NCBI-ProteinID:
XP_014033209
UniProt:
A0A1S3Q180
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Position
ssa27:16145651..16194060
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AA seq
451 aa
AA seq
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MNRSFNKSQSSLQYFDCIAVEVKSKYGAEFRRFSVDRVKPGKFEDFYKLIVHVHRIANME
VMIGYADIHGDLLPINNDDNFCKAVSTAHPLLRVFIQRQEEVDYSSYGTHSLTRKKKAVV
ALRNDVNRKRPHIRIGMPQDFRPVSSIIDVDILPESHRRVRLYRHGSDKPLGFYIRDGTS
VRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVTGKTLDQVTDMMIAN
SHNLIVTVKPVNQRNNVVRASRISGSSGQSSDSSGSTGYPSLSTAAMATGAHGYPDELES
DEESDIVIESSLKRPSRRSSASMVSVASRTSRSHTQAPPQAPVEPTNPPIRPLSVVSTSS
HSQPSSHSQPSLNGLSHHGSLSYMLHRDLNLQHPQLQNPQHHQTQHHSSNPALRESNSSL
HKILSTMRTDPRHSLALPRGGVEEDGTVITL
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggagttttaataaatcccaatcttccctgcaatattttgattgcatcgcggtt
gaagtgaaaagcaagtacggagcagagttccgacggttctccgtggaccgtgtcaagccg
gggaagttcgaggacttctataagctcatcgtgcacgttcaccgcatcgccaacatggag
gtcatgattggctacgctgacatccacggagacctgctgccaatcaacaatgacgacaac
ttctgcaaggcggtgtctacggcccacccgctgctccgagtcttcatacagagacaagag
gaggtcgactacagcagctatgggactcactcgctgacccgaaagaagaaggctgtggtg
gcgctgcggaacgacgtcaacaggaagcgacctcacatccgcattggtatgccgcaggac
ttccggccagtctcctccatcatcgatgtggacatcttgccagagtcccaccgccgcgtt
cgtctctaccgccatggttctgacaaacccctggggttctacatccgggatgggacaagc
gtacgggtgacgccccatggcctggagaaggtgcctgggatttttatctcccgcatggtg
cctgggggcctggctgagagcacgggcctgctggccgtcaatgacgaggtcctggaggtc
aacggcattgaggtgactgggaagacgctagaccaggtaacggacatgatgatcgccaac
agtcacaacctgattgtcacagtgaagccggtgaaccagcggaacaatgtggtgcgagcc
agccggatttccggcagctccggtcagtcgtcagacagcagcggttccaccggctacccc
agcctgtccaccgcagcaatggcgaccggtgcccacggctaccccgacgagctggaaagc
gatgaggagtcagacatcgtcatcgagagcagcctcaagcggccgtcgaggcgctccagc
gcgtcaatggtgtccgtggcttcaagaacgtcacgctcccatacccaagcccctccccag
gcccccgtggaacccaccaaccccccgatccgacccctctctgtggtttccacctcctcc
cactcccagccctcctcccactcccagcccagcctcaatggcctctcccaccacggcagc
cttagctacatgctgcacagggacctgaacctccagcacccccagttacagaacccccag
catcaccaaacccagcaccacagcagcaacccagccctccgggagagcaacagcagcctg
cacaaaatcctcagcaccatgaggacggaccctcgacacagtctggccctgccccgggga
ggggtggaagaggatggcaccgtcatcaccctataa
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