Salmo salar (Atlantic salmon): 106588659
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Entry
106588659 CDS
T04363
Name
(RefSeq) replication protein A 32 kDa subunit-like
KO
K10739
replication factor A2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03030
DNA replication
sasa03420
Nucleotide excision repair
sasa03430
Mismatch repair
sasa03440
Homologous recombination
sasa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106588659
03420 Nucleotide excision repair
106588659
03430 Mismatch repair
106588659
03440 Homologous recombination
106588659
03460 Fanconi anemia pathway
106588659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sasa03032
]
106588659
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106588659
DNA replication proteins [BR:
sasa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
106588659
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
106588659
MMR (mismatch excision repair)
106588659
DSBR (double strand breaks repair)
HR (homologous recombination)
106588659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
LexA_DNA_bind
Motif
Other DBs
NCBI-GeneID:
106588659
NCBI-ProteinID:
XP_014033328
UniProt:
A0A1S3Q038
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Position
ssa27:complement(19654660..19659210)
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AA seq
251 aa
AA seq
DB search
MCFSKVYNKGSDMGSGYRYNQSTCGFTTFQSGQKTTKWSVLQMMPCTVSQLLSATAAREV
FSVGDIEVNQVSVVGIVRRTVPSVNNVLYSVDDMTGPPLGVKLWVDTADPGVDSTFVSPG
TYVKVSGSLRIIQGQRSLVAFNLCCLEDLNEITSHMLEVVQAHMQHNRNPCGGNLGDGDA
STYGLSASQSQVLNLIRSCSDSKPRGISLEELDIKLGYLSMTAISQTLEFLISEGHIFST
IDDKHFRSTTG
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttttcaaaagtatacaacaagggctcagatatgggaagtggatacaggtacaat
cagtccacatgtggatttaccaccttccagtcaggacagaagactaccaagtggtcagtc
ctccagatgatgccgtgcactgtgtcccaactgctgtctgccacggctgccagggaagtc
ttcagtgttggtgacattgaggtcaaccaggtatctgtggtgggtatcgtcaggagaacg
gttccctcagtaaacaatgtcttgtactccgtggacgacatgactggaccaccattgggc
gtgaagctctgggtggacactgcagatcctggtgtggacagtacttttgtttccccaggg
acttatgtcaaggtctctggaagtctgcgtatcattcagggccaaagatcattggtggct
ttcaacctctgttgccttgaggacctgaatgagatcacctctcacatgctggaggtagtg
caggcccacatgcagcacaacaggaacccgtgtggtggtaatcttggagatggagacgcg
tcaacctatgggctgagtgccagtcagagccaggtgttgaacctgatcaggagttgctca
gactccaagcccaggggcatcagtctagaggagctagacattaagctggggtacctcagc
atgactgccatcagccagaccttggagtttctaatcagcgaaggccacatcttctccacc
atcgatgacaagcatttcaggtccactactggctag
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integrated database retrieval system
