Salmo salar (Atlantic salmon): 106588681
Help
Entry
106588681 CDS
T04363
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like
KO
K23619
collagen type XXVIII alpha
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sasa01002
]
106588681
Peptidases and inhibitors [BR:
sasa01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
106588681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Kunitz_BPTI
VWA_CoxE
DUF1194
VWA_4
Motif
Other DBs
NCBI-GeneID:
106588681
NCBI-ProteinID:
XP_014033389
UniProt:
A0A1S3Q1R8
LinkDB
All DBs
Position
ssa27:complement(20607323..20635440)
Genome browser
AA seq
1173 aa
AA seq
DB search
MRKVVELLLLVLVLTHTARGQGRRRKGQRDDNQVLQNEGKILICPVEIMFILDSSEKAKL
LLFEKQKDFVLRFSTRLMQIQAAGWRLRLRLAALQYSSSVSLEHNFRDWQDVDVFQSRVA
SMAYIGHGTYSAFAITNATQMFSRETAANSLRVMLLMTDGVDHPRSPSAVTAASEAKNHN
IRLFTIGLSGLPRDIPTNARLRSIASAPPQQHVLSLTDNLLEDKLFRELSALVNTGCPQP
KSCLCDKGERGPPGSPGKSAQPGSDGTPGPKGFHGEPGINGRPGMEGIEGRPGTRGEKGE
RGECGVPGMKGDPGPDGPPGPRGPRGEQGLSGGPGDQGPEGLVGPKGDRGPGGVTGPPGD
TGIGFPGPKGNKGNQGRPGPTGPMGMGDPGLPGPIGPPGVQGTQGFPGEGLQGPKGDRGY
EGPKGTRGTPGSGFKGDKGNTGAPGLPGLVGFPGAGIQGEKGDSGPSGSPGPRGPPGLGI
VGPKGDQGFPGEHGPQGERGVGEPGSKGEPGPDGSSGIPGIPGEDGAVGPKGEIGLPGLR
GTEGEPGKGIPGEKGDRGDRGVRGLPGSPGPVGPAGAKGEPGSFGMMGLPGPPGRGLPGS
KGDLGPVGQSGPVGDPGVGIAGLKGERGNPGPVGPPGLKGDGYTGPQGLPGLPGQPGELG
PEGKGLPGPKGERGSSGLPGPTGPPGIGLLGLKGSVGQPGPPGLSGIPGEGIQGPKGEPG
FEGPKGPRGPPGDGFPGEKGDMGILGDRGKKGDKGEFGEPGSIGPMGKSGEKGDPGLTRE
EVIKIIRESCGCGVKCRESPLELVFVIDSSESVGPENFEVVKDFVNTLIDRVSVNREASR
IGVVLYSHVDIVVVSLTQQSSQNDIKAAVRKMPYLGEGTFTGSAIGRANQLFQASRPGVR
KVAVVLTDGQADRRDAVQPEDAAREAHTAGIEMFVIGVVNKKDPLYAEFQSEMIAIASDP
DEEHMYLIEDFMTLPTLERTLLSQICEHNDGTLFIPNPMPTLEVYREVPDRGGIPDFEDD
YRRPGPPIFETESPPSSRAPESPGFNENEIDTGKTTSVFEVPLNKLPDIMTAASGGQGGK
QQPPVISMVGPQTPQTPTNWQYIPKTTQLLPDIFVPVVGCRQPLDPGPCRQYVVRWYYDP
EANSCAQFWYGGCQGNGNQFESEAGCRSVCVRT
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaggttgtggagctgttgctccttgtgttggtactaacacacacagccaggggt
cagggcaggaggaggaagggccagagagacgacaaccaggtcctccaaaatgaagggaaa
attctgatctgccccgtggagatcatgttcatcctggacagctcagagaaggccaagttg
ctgctgtttgagaagcagaaagacttcgtcctgcgtttcagcacgcggctcatgcagatc
caggcagcaggttggagactgaggttgaggctggctgcactgcagtacagcagttctgtt
tctctggagcacaacttccgggactggcaggatgttgatgtgttccagagcagagtggcg
tccatggcctacatcggacacggaacctactcagccttcgccatcactaacgctacacag
atgtttagccgtgagacagcggccaacagcctgagggtgatgttgctgatgactgacggc
gtggaccatccccgtagccccagtgctgtgaccgccgcgtccgaggccaagaaccacaac
attcgtctgttcaccatcgggctgtcgggtctacccagggatattcccaccaatgccagg
ttacgttccatcgccagcgccccgccacagcagcacgtcctcagccttacagacaacctg
ctggaggataaactcttcagagaactgagcgcgcttgtcaacacagggtgcccacagccg
aagtcctgtctgtgtgataaaggagaaagaggtccccctggaagcccagggaaatcagcc
cagcctggatctgacggtactcccggtccaaaaggatttcatggggaacctggcatcaac
ggaaggcctgggatggagggtatcgagggtcggcccggcactagaggggaaaagggggaa
agaggcgagtgcggcgtccccgggatgaagggagatccagggccagacggacctccaggc
cctcggggacccagaggagagcagggtcttagtggaggccctggggaccagggccctgaa
ggacttgtaggacccaaaggtgaccgtggacctggtggagtgacaggacctccaggggat
actggcatcggctttcctggacctaaaggcaataagggaaaccagggaaggcctggaccc
accggtcccatgggtatgggtgatccaggactgccgggtccaattggtcctccaggggtt
cagggaacacaagggttcccaggagagggtctacaagggcctaagggtgacaggggttac
gagggtcctaagggcacccgcggcaccccgggttcagggttcaaaggtgacaagggaaac
acaggagctccaggtttgccaggattggtgggttttccaggtgcagggatccaaggagaa
aagggagacagtggtccatctggatctcccggccctcgagggccaccagggctgggaata
gtcggcccaaagggtgaccagggcttcccaggagagcacggaccacagggagagagagga
gtcggggagccagggtcaaagggtgaaccaggacctgacggatcttctgggatacctggt
atacccggggaagatggagcggtcggacctaagggtgagattggtttgccaggactgcga
gggacagagggtgagcctgggaaaggaattcctggagaaaagggtgatcgaggtgaccgg
ggggtgaggggactaccaggatcgccagggcccgtgggacctgcaggagccaagggagag
cctggcagttttggaatgatgggtctaccaggtcctcctggcaggggcctacctgggtca
aagggcgaccttggaccagtggggcagtctgggcctgtaggagaccctggagtgggcatc
gctgggctgaagggtgagagggggaaccctggacctgttggaccaccagggttgaaggga
gacggctacacaggacctcagggcctcccagggttgccagggcaaccaggagagttggga
cctgaagggaaaggattacctggccctaagggagaaagaggttcatcaggacttccaggg
ccaacaggacctcctggcattggtctgctgggacttaagggttctgtgggtcagccaggt
ccacctggtctgtcaggaatcccaggagagggcatccaggggcccaagggagagcctggg
ttcgaggggccaaagggcccccgggggcctccaggggacggctttccaggagaaaaggga
gacatggggattcttggagaccgtgggaagaaaggagacaagggagaatttggagagcca
ggatctataggacccatggggaaatctggtgagaagggggatcctggcttgacaagagag
gaagtcatcaaaattatcagggaaagttgtggctgtggtgtgaagtgcagagagagtcct
ctggagttggtgtttgtgattgacagctcagagagtgttggaccggagaacttcgaggtg
gtcaaggactttgtgaacaccctgattgaccgtgtgtctgtgaaccgcgaggccagcagg
attggtgtggtcctctacagtcatgtggacatagtggtggtcagtctgacgcagcagtcc
agccagaacgacatcaaggctgcggtgaggaagatgccgtacctgggcgagggcaccttt
acgggtagtgccattgggagagccaaccagctgttccaggcctcgcggcccggtgttcgt
aaagttgccgtggtactaacagacgggcaggcagaccggcgtgacgcagtgcagcctgag
gatgccgccagggaggcccacaccgccggcattgagatgtttgtcatcggggtggtgaat
aagaaagacccgctctacgcagagttccaatctgagatgatcgctatcgcctctgaccca
gacgaggaacacatgtatctgatcgaagacttcatgacgctgcccaccctggagagaacg
ctgctcagccagatctgtgagcacaacgatggaaccctcttcatccccaaccccatgccc
acccttgaggtttacagagaagtcccagacagggggggcatacccgactttgaggacgat
tacagaagacctggaccaccaatatttgagaccgagagccctccctcctcacgggcccca
gaatcccctggcttcaacgagaacgaaatcgacactggcaagacgacatcggtcttcgag
gtacccctgaacaagctcccagacatcatgacagcagcatcagggggccaaggaggaaag
cagcaaccccctgttatctctatggtgggaccccagaccccccagacacccaccaactgg
cagtacatccccaagaccacccagcttctgccagacatctttgtaccagtggtggggtgc
agacagccgttggaccctgggccgtgtcgtcagtatgtggtcaggtggtactacgacccg
gaagccaactcctgcgcccagttctggtacggaggttgccagggtaacggaaaccagttt
gagtcggaggccgggtgcaggagcgtttgcgtccgcacgtaa
DBGET
integrated database retrieval system
